PvulFLAVERTChr02.1001832

Transcript Overview
NamePvulFLAVERTChr02.1001832
Unique NamedrPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Sequence length2383
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr02chromosomeChr02:49498093..49500475 -Phaseolus vulgaris cv. Flavert genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvfpvfR178Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PvulFLAVERTChr02.1001832drPhaVulg.Flavert.1.0gene:PvulFLAVERTChr02.1001832Phaseolus vulgarisgene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr02.1001832.0drPhaVulg.Flavert.1.0three_prime_UTR:PvulFLAVERTChr02.1001832.0Phaseolus vulgaristhree_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr02.1001832.1drPhaVulg.Flavert.1.0exon:PvulFLAVERTChr02.1001832.1Phaseolus vulgarisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr02.1001832.1drPhaVulg.Flavert.1.0CDS:PvulFLAVERTChr02.1001832.1Phaseolus vulgarisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr02.1001832.2drPhaVulg.Flavert.1.0five_prime_UTR:PvulFLAVERTChr02.1001832.2Phaseolus vulgarisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832Phaseolus vulgarispolypeptide
drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832-proteinPhaseolus vulgarispolypeptide


Homology
The following BLAST results are available for this feature:
BLAST of PvulFLAVERTChr02.1001832 vs.
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of PvulFLAVERTChr02.1001832 vs.
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of PvulFLAVERTChr02.1001832 vs.
Analysis Date: 2024-08-19 (Blastp of Phaseolus vulgaris cv. Flavert v1.0 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Sequences
The following sequences are available for this feature:

mRNA sequence

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832; Name=PvulFLAVERTChr02.1001832; organism=Phaseolus vulgaris; type=mRNA; length=2383bp
CTTTTGAATCacagtaataaaattaaattcttcaaaatataacattttaa
taGACGAGAttcaactataaaaaaaaagtatgctAATAAACTATTAAAAG
TGAATTAACAACATAACAAGTATTTTATGAGCCAAGAGAAGCCTTAAGCA
CTTGGACAAACTGAAGGTGTGCAGATAACTGGGGAAAATGGCCAAGTGTG
TCTATGATCTGCAAAGTAACTTTCCCTTTGATTTTGTTCTGCATGTACAG
TGCTACACTGTGTGGAACAGCAGCATCCTTTTTGGTCTGAATGATAGTGC
ATGGAGTCTCCACCTTCTCAACCATCTCTCTCCAATCAGAATAGAATATg
gtcttggccaaggagagacCAACTTCACCTCCCATATTCTTCAACCCCTC
TTCAtatttcttcacactttcttcatTGCTTGGATCTGCTATTAATGAGG
CGAATGCAGAAGCAAAGTTTTCGTAGTTGTTTTCTATGTTGGACCGTAAC
TGCTCTACCTCGGACCTGTTAAAGCCTCCCTCATAATCATCTGAATTCAG
AAACCTACTTATATTATTATACCAACACAAAGTTAGACAACTTATCCTTT
TAATTCGGGTTTCTATCATGataaggttatttttttttgtttttttacca
aaatctgtttaaaaaaaattacaaatttaggcaagtcgtgtcaattcggc
acgactttaTATGtacaaatcgtcccaattagacaTGATTatgtcatgtc
atactgaagtcgtgccaacttgacacgattTCTGCCgcgtcatttttttt
taattttattgtttatatattgggtagtaagttatgtaatgttaaaaatt
aatttgatacataattttctaagagtgttagttttaaggaataaaaaatt
ggataatgGTGTATGTATCATGTTTGGATAATCAGCTTATTCAAACTTTG
AACCATTAACTCCTGAGGACACTACCGCCGGACATAGTTTCCCACTAGGC
AAAAAGTATATTTTTGATATTAATGTCTCATGTATGCaaattttttgata
ttttgatatttaatggcGACggacatgatccatacacgattatccaattt
tttgttccttaaaactaacacacTTAGAAagttatgtatcaaattaattt
ttaacattacataacttactatcTAATATAtaccaacaaaatttaaaaaa
aaactgtcgtgtcaagttggcacgacttccgtatgacatggcagagtcgt
gtcaaattgaaacgatttgtgcatatgaagtcgtgccgaattggcacgac
ttacctaaatttgtaattttttttaaacagacccattttgataaaaagta
aaaaaataacatcatggtcaaaaaaatccttttaattcttatattattta
attctataaaCATATATATTCGTAATGAATATGGTTTGACCGGTCAATAT
ACTATTCAAATCCTGATCTCATTGGTGGACTAAAACGAAACTGTAGCCAT
AAACACactgaataaaatttataaacatatatGAGATATCCAAAAGACAG
ATTGAACCGCTTATGCAGAGAGAGACACCCAAAGGCCGAAAATTCGAGAA
AACCAAAGAAATAAAGGATGagaaaaatattagtaaaagaATTACGTGGA
AAAGTCGGTATCAATAAGAGTTaaacaaaaaagataaataaaatcaatta
agtatttaaaattaattaataaagaataaGTAGAAAGATTAATGTGATCT
AACAGGTTCAATATACCGTAGTATAAATAGATTGAGtgtttaatttaact
ttttagtttttctaatgaataattaatataaatacttTTTGCAAGTAGGA
AAAAGTGAAGAGTAGTCTCTGATATAATTTGTAGAAGTACAGAGATGAAG
TAAAAAGAAAGCAGCATGAGTTGAGgggaagagaagaaagaagataCCTT
GGGGAAGAACCAACCAGAATTAGGGTTTTGAAGAGTTGAGGAGTTTTGAG
AGAGGCAATGCAACCAATGATGCCAGACATGGAGCTGCCGACAAAAGTGA
CAGCTTTGAGGTCCATCTCCTGCAGCAGAGTGATCAAGTCATCGGCAAAA
GCTTCGTAGGAGGAATACTTGACAGGGTCGTAGAGTTTCTCATTATTCTT
CACAGCACAAGCCCAATCAAAGGTAACAACACGGTAGTTTTCCACAAGCA
AGGGAACCACTTTGTCCCACACCGACTGATCCATTCCGTAGCCATGAGCC
AACACCAAAGTTTCTGTGCCGGATCCTTGGCTTCTCGCATTCATAGCCTC
CGAAATCCACCTTTTAGTGCTTCCCATGTTTGGGTTACCAATGCTTGAAT
CTTAGTTAGAAACAAAAAGGAGAGTTTGTTACT
back to top

protein sequence of drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832; Name=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832; organism=Phaseolus vulgaris; type=polypeptide; length=85bp
MAKCVYDLQSNFPFDFVLHVQCYTVWNSSILFGLNDSAWSLHLLNHLSPI
RIEYGLGQGETNFTSHILQPLFIFLHTFFIAWICY
back to top

mRNA from alignment at Chr02:49498093..49500475-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832; Name=PvulFLAVERTChr02.1001832; organism=Phaseolus vulgaris; type=mRNA; length=2383bp; location=Sequence derived from: Chr02:49498093..49500475- (Phaseolus vulgaris
CTTTTGAATCACAGTAATAAAATTAAATTCTTCAAAATATAACATTTTAA
TAGACGAGATTCAACTATAAAAAAAAAGTATGCTAATAAACTATTAAAAG
TGAATTAACAACATAACAAGTATTTTATGAGCCAAGAGAAGCCTTAAGCA
CTTGGACAAACTGAAGGTGTGCAGATAACTGGGGAAAATGGCCAAGTGTG
TCTATGATCTGCAAAGTAACTTTCCCTTTGATTTTGTTCTGCATGTACAG
TGCTACACTGTGTGGAACAGCAGCATCCTTTTTGGTCTGAATGATAGTGC
ATGGAGTCTCCACCTTCTCAACCATCTCTCTCCAATCAGAATAGAATATG
GTCTTGGCCAAGGAGAGACCAACTTCACCTCCCATATTCTTCAACCCCTC
TTCATATTTCTTCACACTTTCTTCATTGCTTGGATCTGCTATTAATGAGG
CGAATGCAGAAGCAAAGTTTTCGTAGTTGTTTTCTATGTTGGACCGTAAC
TGCTCTACCTCGGACCTGTTAAAGCCTCCCTCATAATCATCTGAATTCAG
AAACCTACTTATATTATTATACCAACACAAAGTTAGACAACTTATCCTTT
TAATTCGGGTTTCTATCATGATAAGGTTATTTTTTTTTGTTTTTTTACCA
AAATCTGTTTAAAAAAAATTACAAATTTAGGCAAGTCGTGTCAATTCGGC
ACGACTTTATATGTACAAATCGTCCCAATTAGACATGATTATGTCATGTC
ATACTGAAGTCGTGCCAACTTGACACGATTTCTGCCGCGTCATTTTTTTT
TAATTTTATTGTTTATATATTGGGTAGTAAGTTATGTAATGTTAAAAATT
AATTTGATACATAATTTTCTAAGAGTGTTAGTTTTAAGGAATAAAAAATT
GGATAATGGTGTATGTATCATGTTTGGATAATCAGCTTATTCAAACTTTG
AACCATTAACTCCTGAGGACACTACCGCCGGACATAGTTTCCCACTAGGC
AAAAAGTATATTTTTGATATTAATGTCTCATGTATGCAAATTTTTTGATA
TTTTGATATTTAATGGCGACGGACATGATCCATACACGATTATCCAATTT
TTTGTTCCTTAAAACTAACACACTTAGAAAGTTATGTATCAAATTAATTT
TTAACATTACATAACTTACTATCTAATATATACCAACAAAATTTAAAAAA
AAACTGTCGTGTCAAGTTGGCACGACTTCCGTATGACATGGCAGAGTCGT
GTCAAATTGAAACGATTTGTGCATATGAAGTCGTGCCGAATTGGCACGAC
TTACCTAAATTTGTAATTTTTTTTAAACAGACCCATTTTGATAAAAAGTA
AAAAAATAACATCATGGTCAAAAAAATCCTTTTAATTCTTATATTATTTA
ATTCTATAAACATATATATTCGTAATGAATATGGTTTGACCGGTCAATAT
ACTATTCAAATCCTGATCTCATTGGTGGACTAAAACGAAACTGTAGCCAT
AAACACACTGAATAAAATTTATAAACATATATGAGATATCCAAAAGACAG
ATTGAACCGCTTATGCAGAGAGAGACACCCAAAGGCCGAAAATTCGAGAA
AACCAAAGAAATAAAGGATGAGAAAAATATTAGTAAAAGAATTACGTGGA
AAAGTCGGTATCAATAAGAGTTAAACAAAAAAGATAAATAAAATCAATTA
AGTATTTAAAATTAATTAATAAAGAATAAGTAGAAAGATTAATGTGATCT
AACAGGTTCAATATACCGTAGTATAAATAGATTGAGTGTTTAATTTAACT
TTTTAGTTTTTCTAATGAATAATTAATATAAATACTTTTTGCAAGTAGGA
AAAAGTGAAGAGTAGTCTCTGATATAATTTGTAGAAGTACAGAGATGAAG
TAAAAAGAAAGCAGCATGAGTTGAGGGGAAGAGAAGAAAGAAGATACCTT
GGGGAAGAACCAACCAGAATTAGGGTTTTGAAGAGTTGAGGAGTTTTGAG
AGAGGCAATGCAACCAATGATGCCAGACATGGAGCTGCCGACAAAAGTGA
CAGCTTTGAGGTCCATCTCCTGCAGCAGAGTGATCAAGTCATCGGCAAAA
GCTTCGTAGGAGGAATACTTGACAGGGTCGTAGAGTTTCTCATTATTCTT
CACAGCACAAGCCCAATCAAAGGTAACAACACGGTAGTTTTCCACAAGCA
AGGGAACCACTTTGTCCCACACCGACTGATCCATTCCGTAGCCATGAGCC
AACACCAAAGTTTCTGTGCCGGATCCTTGGCTTCTCGCATTCATAGCCTC
CGAAATCCACCTTTTAGTGCTTCCCATGTTTGGGTTACCAATGCTTGAAT
CTTAGTTAGAAACAAAAAGGAGAGTTTGTTACT
back to top

Coding sequence (CDS) from alignment at Chr02:49498093..49500475-

>drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832 ID=drPhaVulg.Flavert.1.0mRNA:PvulFLAVERTChr02.1001832; Name=PvulFLAVERTChr02.1001832; organism=Phaseolus vulgaris; type=CDS; length=258bp; location=Sequence derived from: Chr02:49498093..49500475- (Phaseolus vulgaris
ATGGCCAAGTGTGTCTATGATCTGCAAAGTAACTTTCCCTTTGATTTTGT
TCTGCATGTACAGTGCTACACTGTGTGGAACAGCAGCATCCTTTTTGGTC
TGAATGATAGTGCATGGAGTCTCCACCTTCTCAACCATCTCTCTCCAATC
AGAATAGAATATGGTCTTGGCCAAGGAGAGACCAACTTCACCTCCCATAT
TCTTCAACCCCTCTTCATATTTCTTCACACTTTCTTCATTGCTTGGATCT
GCTATTAA
back to top