Vigun09g159200.1

Transcript Overview
NameVigun09g159200.1
Unique NamedrVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length234
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09chromosomeVu09:32620340..32620988 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.2n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g159200drVigUngu.IT97K.1.2.Vigun09g159200.v1.2Vigna unguiculatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2.exon.1drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2.exon.1Vigna unguiculataexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2.five_prime_UTR.1drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2.five_prime_UTR.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2.CDS.1drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2.CDS.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2.three_prime_UTR.1drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2.three_prime_UTR.1Vigna unguiculatathree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2Vigna unguiculatapolypeptide
drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2-proteinVigna unguiculatapolypeptide


Homology
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RDF4|A0A0S3RDF4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G144400 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.972e-33
Identity = 66/74 (89.19%), Postives = 71/74 (95.95%), Query Frame = 0
Query:    4 MPGLWRHQLLFLTLLAFVVIESEGSRFPNDFWEQMLPKRLNSPSSSPSGGTNSVFSTSSTASESDIPPSIDGKV 77
            MPG WRHQLLFLTLLAFVV+ES+GSRFPN FWEQMLPK+LNSPSSSPSGGTNSVF+TSSTAS+SDI PSIDGKV
Sbjct:    1 MPGFWRHQLLFLTLLAFVVLESQGSRFPNYFWEQMLPKKLNSPSSSPSGGTNSVFATSSTASQSDIHPSIDGKV 74          
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J7HR99|A0A7J7HR99_CAMSI (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_008015 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.399e-20
Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = 0
Query:    4 MPGLWRHQLLFLTLLAFVVIESEGSRFPNDFWEQMLPKRLNSPSSSPSGGTNSVFSTSSTASESDI-PPSIDGKV 77
            M G WRH+ L L+LLAF+V+ SE SR P  +WEQM+PK+L +P SSPS GTNSV  +SSTA E+D   PS DGKV
Sbjct:    1 MLGSWRHKCLLLSLLAFIVL-SEASRLPKVYWEQMMPKKLPTPKSSPSKGTNSVTMSSSTAIETDQNRPSSDGKV 74          
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9W7M8P4|A0A9W7M8P4_HIBTR (Uncharacterized protein OS=Hibiscus trionum OX=183268 GN=HRI_002624800 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.980e-20
Identity = 43/71 (60.56%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    8 WRHQLLFLTLLAFVVIESEGSRFPNDFWEQMLPKRLNSPSSSPSGGTNSVFSTSSTASESDIP-PSIDGKV 77
            WRH  L  TLLAF+V+ SE SR P ++WEQMLPK+L +PSSSPS GTNSV +++S A++ D+  PS DGKV
Sbjct:    5 WRHSCLLFTLLAFIVL-SESSRLPKEYWEQMLPKKLPTPSSSPSKGTNSVKTSTSKAAKIDVNMPSSDGKV 74          
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371EZW8|A0A371EZW8_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_49037 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.577e-20
Identity = 55/73 (75.34%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    4 MPGLWRHQLLFLTLLAFVVIESEGSRFPNDFWEQMLPKRLNSPSSSPSGGTNSVFSTSSTASESDIPPSIDGK 76
            M G WRHQ LFLTLLAF+V+ SEGSR P  +WEQMLPK+L SPSSSPSGGTNSVF+TSSTAS+ D  PS DGK
Sbjct:    1 MSGFWRHQFLFLTLLAFIVL-SEGSRLPKGYWEQMLPKKLPSPSSSPSGGTNSVFATSSTASKIDNLPSSDGK 72          
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A4PQS1|A0A6A4PQS1_LUPAL (Encoded peptide OS=Lupinus albus OX=3870 GN=Lalb_Chr11g0066261 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.819e-20
Identity = 48/75 (64.00%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    4 MPGLWRHQLLFLTLLAFVVIESEGSRF-PNDFWEQMLPKRLNSPSSSPSGGTNSVFSTSSTASESDIPPSIDGKV 77
            M G WRH+ L  TLLAFVVI SEGSR  P +++EQMLPK+L S SSSPS GTNSVF+T ST S+++  PS D KV
Sbjct:    1 MLGSWRHRFLLFTLLAFVVI-SEGSRLIPKEYFEQMLPKKLPSHSSSPSKGTNSVFTTPSTTSKTNSLPSSDRKV 74          
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9W7LVS5|A0A9W7LVS5_HIBTR (Uncharacterized protein OS=Hibiscus trionum OX=183268 GN=HRI_001505600 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.554e-19
Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    8 WRHQLLFLTLLAFVVIESEGSRFPNDFWEQMLPKRLNSPSSSPSGGTNSVFSTSSTASESDIP-PSIDGKV 77
            WRH+ L  TLLAF+V+ SE SR P ++WEQMLPK+L +PSSSPS GTNSV +++  A ++D   PS DGKV
Sbjct:    5 WRHKCLLFTLLAFIVL-SESSRLPKEYWEQMLPKKLPTPSSSPSKGTNSVTTSTPKAVKTDTGLPSSDGKV 74          
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8K0E692|A0A8K0E692_9ROSA (Uncharacterized protein OS=Rhamnella rubrinervis OX=2594499 GN=FNV43_RR18423 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.282e-19
Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    8 WRHQ-LLFLTLLAFVVIESEGSRFPNDFWEQMLPKRLNSPSSSPSGGTNSVFSTSSTASE--SDIPPSIDGKV 77
            WRH+ LLF  LLAF+V+ S+GSR P ++W+QMLPK+L +PSSSPS GTNSV ++SS A E  S +P S DGKV
Sbjct:   38 WRHKCLLFTLLLAFIVL-SQGSRLPKEYWKQMLPKKLPTPSSSPSKGTNSVTTSSSKAVEANSKLPYSSDGKV 109          
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6J5Y4V2|A0A6J5Y4V2_PRUAR (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS47413 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.502e-19
Identity = 43/75 (57.33%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    4 MPGLWRHQLLFLTLLAFVVIESEGSRFPNDFWEQMLPKRLNSPSSSPSGGTNSVFSTSSTASESDIP-PSIDGKV 77
            M G WRH+ L  TL+AF+V+ SE SR P D W+QMLPK+L +PSSSPS GTNS   +SS + E+    PS DGKV
Sbjct:    1 MSGSWRHKCLLFTLVAFIVL-SEASRLPKDCWQQMLPKKLPTPSSSPSKGTNSATKSSSKSLEAHRKLPSSDGKV 74          
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T2YUZ0|A0A8T2YUZ0_POPDE (Uncharacterized protein OS=Populus deltoides OX=3696 GN=H0E87_010941 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.649e-18
Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    8 WRHQLLFLTLLAFVVIESEGSRFPNDFWEQMLPKRLNSPSSSPSGGTNSVFSTSSTASESDIP-PSIDGKV 77
            WR + L  TLLAFVV+ S+ SR P  +WEQMLPK+L +PSSSPS GTNSV  + ST  +SD    S DGKV
Sbjct:    5 WRQKCLLFTLLAFVVLSSDASRLPKAYWEQMLPKKLPAPSSSPSKGTNSVSRSYSTTVKSDSNLSSSDGKV 75          
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6N2LUB4|A0A6N2LUB4_SALVM (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS276075 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.243e-18
Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    8 WRHQLLFLTLLAFVVIESEGSRFPNDFWEQMLPKRLNSPSSSPSGGTNSVFSTSSTASESDIP-PSIDGKV 77
            WR + L  TLLAF+V+ S+ SR P  +WEQMLPK+L +PSSSPS GTNSV  + ST  +SD    S DGKV
Sbjct:    5 WRQKFLLFTLLAFIVLASDASRLPGAYWEQMLPKKLPTPSSSPSKGTNSVSRSYSTTIKSDSDLSSTDGKV 75          
The following BLAST results are available for this feature:
BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3RDF4|A0A0S3RDF4_PHAAN1.972e-3389.19Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A7J7HR99|A0A7J7HR99_CAMSI1.399e-2061.33Uncharacterized protein OS=Camellia sinensis OX=44... [more]
tr|A0A9W7M8P4|A0A9W7M8P4_HIBTR2.980e-2060.56Uncharacterized protein OS=Hibiscus trionum OX=183... [more]
tr|A0A371EZW8|A0A371EZW8_MUCPR3.577e-2075.34Uncharacterized protein (Fragment) OS=Mucuna pruri... [more]
tr|A0A6A4PQS1|A0A6A4PQS1_LUPAL7.819e-2064.00Encoded peptide OS=Lupinus albus OX=3870 GN=Lalb_C... [more]
tr|A0A9W7LVS5|A0A9W7LVS5_HIBTR2.554e-1959.15Uncharacterized protein OS=Hibiscus trionum OX=183... [more]
tr|A0A8K0E692|A0A8K0E692_9ROSA4.282e-1961.64Uncharacterized protein OS=Rhamnella rubrinervis O... [more]
tr|A0A6J5Y4V2|A0A6J5Y4V2_PRUAR5.502e-1957.33Uncharacterized protein OS=Prunus armeniaca OX=365... [more]
tr|A0A8T2YUZ0|A0A8T2YUZ0_POPDE2.649e-1859.15Uncharacterized protein OS=Populus deltoides OX=36... [more]
tr|A0A6N2LUB4|A0A6N2LUB4_SALVM4.243e-1857.75Uncharacterized protein OS=Salix viminalis OX=4068... [more]
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BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vigun09g159200.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2; Name=Vigun09g159200.1; organism=Vigna unguiculata; type=mRNA; length=234bp
ATGGTCATCATGCCAGGTTTGTGGAGGCACCAGTTATTGTTCTTGACTCT
TCTTGCTTTTGTTGTTATAGAATCAGAAGGTTCAAGATTTCCCAATGATT
TTTGGGAACAGATGCTTCCCAAGAGGCTAAATTCTCCTTCTTCTTCTCCC
TCCGGAGGCACAAACTCTGTGTTTTCCACTTCTTCCACAGCCTCCGAATC
TGATATTCCTCCTTCTATTGATGGAAAGGTCTAA
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protein sequence of drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2

>drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2; Name=drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2; organism=Vigna unguiculata; type=polypeptide; length=78bp
MVIMPGLWRHQLLFLTLLAFVVIESEGSRFPNDFWEQMLPKRLNSPSSSP
SGGTNSVFSTSSTASESDIPPSIDGKV*
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mRNA from alignment at Vu09:32620340..32620988+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2; Name=Vigun09g159200.1; organism=Vigna unguiculata; type=mRNA; length=649bp; location=Sequence derived from: Vu09:32620340..32620988+ (Vigna unguiculata
CTGCCATTTACGCATCCTTCCCCAACCAAACAAGTTGGCAGCATCCGTAC ATTACTGAACATGTCTGCTGTCAGAACCCTCTAAAGCTTCTCTATTTAAA GCCAAATGAAGGTTCTGTGCAGTTCCTGAGTAGTGATTAGTAGTAATATC AGTAGCACTCATGGTCATCATGCCAGGTTTGTGGAGGCACCAGTTATTGT TCTTGACTCTTCTTGCTTTTGTTGTTATAGAATCAGAAGGTTCAAGATTT CCCAATGATTTTTGGGAACAGATGCTTCCCAAGAGGCTAAATTCTCCTTC TTCTTCTCCCTCCGGAGGCACAAACTCTGTGTTTTCCACTTCTTCCACAG CCTCCGAATCTGATATTCCTCCTTCTATTGATGGAAAGGTCTAAGTTACA GTTGTGGTCATTGTGAAAGAGTGCAGTCTTGAGAGAATCAGTGTTCATCT GGGTCTGAAGAGATAGTCTCTTGTAAAGACATTTAATTATAGTTCGCAGG ATAAGTTTATCAATGACAATAACTAGTTACTTGTAAAATCTGTGGAGAAC CATTTCAATTCTCAATTCAAGGTTTCTGTTTTCTTGTTTCGTGTAACATC GTTGCTATTGGTTATATTTTCCTTGATATATAATAGCTTTTCGATCTTG
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Coding sequence (CDS) from alignment at Vu09:32620340..32620988+

>drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun09g159200.1.v1.2; Name=Vigun09g159200.1; organism=Vigna unguiculata; type=CDS; length=234bp; location=Sequence derived from: Vu09:32620340..32620988+ (Vigna unguiculata
ATGGTCATCATGCCAGGTTTGTGGAGGCACCAGTTATTGTTCTTGACTCT
TCTTGCTTTTGTTGTTATAGAATCAGAAGGTTCAAGATTTCCCAATGATT
TTTGGGAACAGATGCTTCCCAAGAGGCTAAATTCTCCTTCTTCTTCTCCC
TCCGGAGGCACAAACTCTGTGTTTTCCACTTCTTCCACAGCCTCCGAATC
TGATATTCCTCCTTCTATTGATGGAAAGGTCTAA
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