Vigun01g024400.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6M4S7|A0A4D6M4S7_VIGUN (Isochorismate synthase OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g292 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 5.260e-52 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL Sbjct: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0JJU2|A0A8T0JJU2_PHAAN (Protein PHYLLO-like protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0206400 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 4.686e-47 Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMK LCSGLGS+HENGNAIHEVVEIPNCGHAAHLENPLAIIAAIAR+LTRL Sbjct: 1420 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKMLCSGLGSKHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARYLTRL 1499
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U4F3|A0A1S3U4F3_VIGRR (Protein PHYLLO, chloroplastic isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761862 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.935e-46 Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGS+HENG AIHEVVEIPNCGHAAHLENPLAIIAAIAR+LTRL Sbjct: 1613 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSKHENGIAIHEVVEIPNCGHAAHLENPLAIIAAIARYLTRL 1692
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BV30|V7BV30_PHAVU (Mandelate racemase/muconate lactonizing enzyme C-terminal domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G022900g PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 7.309e-46 Identity = 76/80 (95.00%), Postives = 78/80 (97.50%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 MWEDLPNCRVPL+IIHGEKDTKFRNIAQKMMK LCSGLGS+HENGNAIHEVVEIPN GHAAHLENPLAIIAAIARFLTRL Sbjct: 1613 MWEDLPNCRVPLVIIHGEKDTKFRNIAQKMMKALCSGLGSKHENGNAIHEVVEIPNSGHAAHLENPLAIIAAIARFLTRL 1692
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UIU8|A0A0L9UIU8_PHAAN (Mandelate racemase/muconate lactonizing enzyme C-terminal domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g006600 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 9.740e-46 Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMK LCSGLGS+HENGNAIHEVVEIPNCGHAAHLENPLAIIAAIAR+LTRL Sbjct: 883 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKMLCSGLGSKHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARYLTRL 962
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SKG3|A0A0S3SKG3_PHAAN (Mandelate racemase/muconate lactonizing enzyme C-terminal domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G229400 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.196e-45 Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMK LCSGLGS+HENGNAIHEVVEIPNCGHAAHLENPLAIIAAIAR+LTRL Sbjct: 1320 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKMLCSGLGSKHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARYLTRL 1399
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U4K5|A0A1S3U4K5_VIGRR (Protein PHYLLO, chloroplastic isoform X3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761862 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.305e-45 Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGS+HENG AIHEVVEIPNCGHAAHLENPLAIIAAIAR+LTRL Sbjct: 1319 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSKHENGIAIHEVVEIPNCGHAAHLENPLAIIAAIARYLTRL 1398
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SYE5|A0AA86SYE5_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS17973 PE=4 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.367e-41 Identity = 71/80 (88.75%), Postives = 74/80 (92.50%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 MWEDL NCRVPLLIIHGE DTKFRNIA+KMMKTLCSGLGS +E GN IHEVVEIP+CGHAAHLENPL IIAAIARFLTRL Sbjct: 759 MWEDLQNCRVPLLIIHGETDTKFRNIARKMMKTLCSGLGSNYEEGNDIHEVVEIPSCGHAAHLENPLPIIAAIARFLTRL 838
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2SJQ1|A0A0B2SJQ1_GLYSO (Protein PHYLLO, chloroplastic OS=Glycine soja OX=3848 GN=glysoja_039994 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.915e-38 Identity = 64/80 (80.00%), Postives = 70/80 (87.50%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 MWEDLPNCRVPLLI+HGEKDTKFR IAQ MMK LCS L S+HE G IHEVVE+P+CGHAAHLENPL +IAAI RFLTR+ Sbjct: 1272 MWEDLPNCRVPLLIMHGEKDTKFRKIAQAMMKALCSSLRSKHEKGYDIHEVVEVPSCGHAAHLENPLPLIAAIGRFLTRI 1351
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SJI5|A0A151SJI5_CAJCA (Esterase ytxM OS=Cajanus cajan OX=3821 GN=KK1_001150 PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 5.913e-38 Identity = 60/80 (75.00%), Postives = 69/80 (86.25%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 +WEDLPNCR+PLLI+HGEKDTKFR IAQ MM L +GLGS H+ G+ IHEVVE+PNCGHAAHLENPL IIAA+ RF+ RL Sbjct: 169 LWEDLPNCRIPLLIMHGEKDTKFRKIAQAMMNALFTGLGSNHDKGSDIHEVVEVPNCGHAAHLENPLPIIAAMRRFVARL 248
BLAST of Vigun01g024400.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q15KI9|PHYLO_ARATH (Protein PHYLLO, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PHYLLO PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 4.915e-16 Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 +WE+L +C + ++ GEKD K++ IA +M + + ++ N I E+VEIP GHA HLE+PL +I A+ +FLTR+ Sbjct: 1620 LWEELEDCDTNISLVFGEKDVKYKQIATRMYREM----SKSKKSVNNIIEIVEIPEAGHAVHLESPLRVILALRKFLTRV 1695
BLAST of Vigun01g024400.1 vs. Araport11
Match: | (Symbols: PHYLLO | PHYLLO | chr1:25896988-25906553 FORWARD LENGTH=1715) HSP 1 Score: 74.3294 bits (181), Expect = 4.968e-17 Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 +WE+L +C + ++ GEKD K++ IA +M + + ++ N I E+VEIP GHA HLE+PL +I A+ +FLTR+ Sbjct: 1620 LWEELEDCDTNISLVFGEKDVKYKQIATRMYREM----SKSKKSVNNIIEIVEIPEAGHAVHLESPLRVILALRKFLTRV 1695
BLAST of Vigun01g024400.1 vs. Araport11
Match: | (Symbols: PHYLLO | PHYLLO | chr1:25899393-25906553 FORWARD LENGTH=1371) HSP 1 Score: 73.559 bits (179), Expect = 7.521e-17 Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 1 MWEDLPNCRVPLLIIHGEKDTKFRNIAQKMMKTLCSGLGSEHENGNAIHEVVEIPNCGHAAHLENPLAIIAAIARFLTRL 80 +WE+L +C + ++ GEKD K++ IA +M + + ++ N I E+VEIP GHA HLE+PL +I A+ +FLTR+ Sbjct: 1276 LWEELEDCDTNISLVFGEKDVKYKQIATRMYREM----SKSKKSVNNIIEIVEIPEAGHAVHLESPLRVILALRKFLTRV 1351 The following BLAST results are available for this feature:
BLAST of Vigun01g024400.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vigun01g024400.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt Swissprot) Total hits: 1 Position : 0 Zoom : x 1
BLAST of Vigun01g024400.1 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs arabidopsis Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata L. Walp IT97K-499-35 genome v1.2
Date Performed: 2024-08-19 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drVigUngu.IT97K.1.2.Vigun01g024400.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g024400.1.v1.2; Name=Vigun01g024400.1; organism=Vigna unguiculata; type=mRNA; length=243bpback to top protein sequence of drVigUngu.IT97K.1.2.Vigun01g024400.1.v1.2 >drVigUngu.IT97K.1.2.Vigun01g024400.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g024400.1.v1.2; Name=drVigUngu.IT97K.1.2.Vigun01g024400.1.v1.2; organism=Vigna unguiculata; type=polypeptide; length=81bpback to top mRNA from alignment at Vu01:2646750..2657197- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drVigUngu.IT97K.1.2.Vigun01g024400.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g024400.1.v1.2; Name=Vigun01g024400.1; organism=Vigna unguiculata; type=mRNA; length=10448bp; location=Sequence derived from: Vu01:2646750..2657197- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:2646750..2657197- >drVigUngu.IT97K.1.2.Vigun01g024400.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun01g024400.1.v1.2; Name=Vigun01g024400.1; organism=Vigna unguiculata; type=CDS; length=243bp; location=Sequence derived from: Vu01:2646750..2657197- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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