Vigun07g076100.1

Transcript Overview
NameVigun07g076100.1
Unique NamedrVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length624
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu07chromosomeVu07:10094477..10097298 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.2n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun07g076100drVigUngu.IT97K.1.2.Vigun07g076100.v1.2Vigna unguiculatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.7drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.7Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.6drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.6Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.5drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.5Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.4drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.4Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.3drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.3Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.2drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.2Vigna unguiculataexon
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.1drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.exon.1Vigna unguiculataexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.three_prime_UTR.2drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.three_prime_UTR.2Vigna unguiculatathree_prime_UTR
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.three_prime_UTR.1drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.three_prime_UTR.1Vigna unguiculatathree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.CDS.5drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.CDS.5Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.CDS.4drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.CDS.4Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.CDS.3drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.CDS.3Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.CDS.2drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.CDS.2Vigna unguiculataCDS
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.CDS.1drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.CDS.1Vigna unguiculataCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.five_prime_UTR.2drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.five_prime_UTR.2Vigna unguiculatafive_prime_UTR
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.five_prime_UTR.1drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2.five_prime_UTR.1Vigna unguiculatafive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2Vigna unguiculatapolypeptide
drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2-proteinVigna unguiculatapolypeptide


Homology
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3UY56|A0A1S3UY56_VIGRR (U1 small nuclear ribonucleoprotein C OS=Vigna radiata var. radiata OX=3916 GN=LOC106769779 PE=3 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 2.241e-139
Identity = 199/207 (96.14%), Postives = 203/207 (98.07%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNH+MVQRPNLPPVLPPPRLPIPGN QVPGSQPL+PGMRPPVFPRPLPGAPGYVSAP MPPMLPPPGAPQV GQLNTLPRPPSLAPPPT PGSTAAPASNGAPSM+SSA+YQANPPAPSSGGYDNYNASAQAPEGNH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNTQVPGSQPLMPGMRPPVFPRPLPGAPGYVSAPTMPPMLPPPGAPQVSGQLNTLPRPPSLAPPPTVPGSTAAPASNGAPSMVSSAVYQANPPAPSSGGYDNYNASAQAPEGNH 207
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SS67|A0A0S3SS67_PHAAN (U1 small nuclear ribonucleoprotein C OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G242600 PE=3 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 2.981e-139
Identity = 199/207 (96.14%), Postives = 203/207 (98.07%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNH+MVQRPNLPPVLPPPRLPIPGNAQVPG QPL+PGMRPPVFPRPLPGAPGYVSAP MPPMLPPPGAPQV GQLNTLPRPPSLAPPPT PGSTAAPASNGAPSM+SSA+YQANPPAPSSGGYDNYNASAQAPEGNH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQVPGGQPLMPGMRPPVFPRPLPGAPGYVSAPTMPPMLPPPGAPQVSGQLNTLPRPPSLAPPPTVPGSTAAPASNGAPSMVSSALYQANPPAPSSGGYDNYNASAQAPEGNH 207
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SSG2|A0A0S3SSG2_PHAAN (U1 small nuclear ribonucleoprotein C OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G259600 PE=3 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 5.792e-136
Identity = 197/207 (95.17%), Postives = 201/207 (97.10%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNH+MVQRPNLPPVLPPPRLPIPGNAQVPGSQPL+PGMRPPVFPRPLPGAPGY+SAP MPPMLPPPGAPQVP QL+TLPRPPSLAPPPTAPGSTAAP SNGAP   SSAMYQANPPAPSSGGYDNYNASAQAPEGNH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLMPGMRPPVFPRPLPGAPGYISAPTMPPMLPPPGAPQVPSQLSTLPRPPSLAPPPTAPGSTAAPTSNGAP---SSAMYQANPPAPSSGGYDNYNASAQAPEGNH 204
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TWM5|A0A0L9TWM5_PHAAN (U1 small nuclear ribonucleoprotein C OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g097700 PE=3 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 5.792e-136
Identity = 197/207 (95.17%), Postives = 201/207 (97.10%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNH+MVQRPNLPPVLPPPRLPIPGNAQVPGSQPL+PGMRPPVFPRPLPGAPGY+SAP MPPMLPPPGAPQVP QL+TLPRPPSLAPPPTAPGSTAAP SNGAP   SSAMYQANPPAPSSGGYDNYNASAQAPEGNH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLMPGMRPPVFPRPLPGAPGYISAPTMPPMLPPPGAPQVPSQLSTLPRPPSLAPPPTAPGSTAAPTSNGAP---SSAMYQANPPAPSSGGYDNYNASAQAPEGNH 204
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BFF2|V7BFF2_PHAVU (U1 small nuclear ribonucleoprotein C OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G166600g PE=3 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 3.002e-135
Identity = 197/207 (95.17%), Postives = 201/207 (97.10%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPL+PGMRPPVFPRP    PGYVSAP MPPMLPPPGAPQ+PGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSM+SSAMYQANP APSSGGYDNYNASAQAP+GNH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLMPGMRPPVFPRP---PPGYVSAPTMPPMLPPPGAPQMPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMVSSAMYQANPSAPSSGGYDNYNASAQAPDGNH 204
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6N236|A0A4D6N236_VIGUN (U1 small nuclear ribonucleoprotein C OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g1076 PE=3 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 3.402e-131
Identity = 196/207 (94.69%), Postives = 196/207 (94.69%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQ           RPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQ-----------RPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 196
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IGV5|A0A445IGV5_GLYSO (U1 small nuclear ribonucleoprotein C OS=Glycine soja OX=3848 GN=D0Y65_025774 PE=3 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 1.367e-105
Identity = 193/207 (93.24%), Postives = 198/207 (95.65%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNH+MVQRPNLPPVLPPPRLPIPGNAQ+PG QPL+ GMRPPVFPRP PGAPGYVSA  MPPMLPPPGAPQVPGQLNT+PRPPSLAPPPT PGSTA PASNGAPSM+SSAMYQANPPAPSSG YDNYN SAQAPEGNH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGGQPLMQGMRPPVFPRP-PGAPGYVSAHTMPPMLPPPGAPQVPGQLNTIPRPPSLAPPPTVPGSTATPASNGAPSMVSSAMYQANPPAPSSGSYDNYNTSAQAPEGNH 206
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1L7Y6|I1L7Y6_SOYBN (U1 small nuclear ribonucleoprotein C OS=Glycine max OX=3847 GN=100790892 PE=3 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 1.367e-105
Identity = 193/207 (93.24%), Postives = 198/207 (95.65%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNH+MVQRPNLPPVLPPPRLPIPGNAQ+PG QPL+ GMRPPVFPRP PGAPGYVSA  MPPMLPPPGAPQVPGQLNT+PRPPSLAPPPT PGSTA PASNGAPSM+SSAMYQANPPAPSSG YDNYN SAQAPEGNH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGGQPLMQGMRPPVFPRP-PGAPGYVSAHTMPPMLPPPGAPQVPGQLNTIPRPPSLAPPPTVPGSTATPASNGAPSMVSSAMYQANPPAPSSGSYDNYNTSAQAPEGNH 206
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86TIN2|A0AA86TIN2_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS22101 PE=4 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.399e-105
Identity = 198/207 (95.65%), Postives = 200/207 (96.62%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPL+PGMRPPVFPRPLPGAP Y S P MPPMLPPPGAPQVPGQLNTLPRPPSLAPPP  PGS AAPASNGAPSM+SSAMYQANPPAPSSGGYDNYNASAQAPEGNH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLMPGMRPPVFPRPLPGAPAYGSVPTMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPAVPGSAAAPASNGAPSMVSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MYJ3|A0A4D6MYJ3_VIGUN (U1 small nuclear ribonucleoprotein C OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g1549 PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 2.404e-103
Identity = 195/207 (94.20%), Postives = 199/207 (96.14%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNH+MVQRPNLPPVLPPPRLPIPGNAQVPGSQPL+PGMRPPVFPRPLPGAPGY SAP MPPMLPPP APQV GQLNTLPRPPSLAPPPT PGSTA PASNGAPSM+SSA+YQANPPAP  GGYDNYNASAQAPEGNH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLMPGMRPPVFPRPLPGAPGYASAPTMPPMLPPPAAPQVSGQLNTLPRPPSLAPPPTVPGSTAPPASNGAPSMVSSAVYQANPPAP--GGYDNYNASAQAPEGNH 205
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|F6HQ26|RU1C_VITVI (U1 small nuclear ribonucleoprotein C OS=Vitis vinifera OX=29760 GN=VIT_07s0104g01170 PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 9.989e-88
Identity = 147/213 (69.01%), Postives = 170/213 (79.81%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPN-----LPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPG-QLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASAQAPEGNH 207
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVG AYN  +V  P        PVLP P +P+ G+A +P + PL+PGMRPPV PRP+PGAPGY+ AP MP M+ PPGAP +P   LN+LPRPP++  PP  PGST+ P S GAPSM++  MYQANP  P+SGG+D++N +AQ PE NH
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPRPVPGAPGYMPAPGMPSMMAPPGAPSMPMPPLNSLPRPPTMNVPPAVPGSTSTPTSGGAPSMMTQPMYQANPAGPTSGGFDSFNINAQGPEANH 213
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|C5XYW4|RU1C2_SORBI (U1 small nuclear ribonucleoprotein C-2 OS=Sorghum bicolor OX=4558 GN=Sb04g028260 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.193e-49
Identity = 121/217 (55.76%), Postives = 131/217 (60.37%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMM-----VQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSLAPPPTAP----------------------GSTAAPASNGAPSMLSSAMYQANPPAPSS 190
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQ       HM+     V RP L P+LP P +P  G  Q     PL+PG+RPP+   P PG PGY   P  PP +P PGAP  PG +     PP   P P AP                      G   AP  N A      A+YQANPPAP+ 
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQAGAPFNQHMLAFPGAVARPRL-PILPTPGMPH-GFPQA----PLMPGVRPPIL--PAPGVPGY---PGAPPTMPQPGAP--PGSMPQPGAPPGSMPQPGAPPGSMPMQMAPLPRPPTLPPPTSGVPGAPIPNSA---APPAIYQANPPAPAG 201
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q56XE4|RU1C_ARATH (U1 small nuclear ribonucleoprotein C OS=Arabidopsis thaliana OX=3702 GN=At4g03120 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 7.380e-49
Identity = 96/154 (62.34%), Postives = 106/154 (68.83%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSL 154
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ   +QQVG  +N  M+ RP  P                PGS P+  GMRPPV PRP+    GY+  P +P M+ PPGAP  P   N + RPP +
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQTGGYQQVGAVFNQHMLARPRPP------------MMLPPGSMPM--GMRPPVLPRPMMPPQGYMPPPGVPQMMAPPGAPLPPPPQNGILRPPGM 140
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|C5XZK6|RU1C1_SORBI (U1 small nuclear ribonucleoprotein C-1 OS=Sorghum bicolor OX=4558 GN=Sb04g009880 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.540e-45
Identity = 119/209 (56.94%), Postives = 131/209 (62.68%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMM-----VQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPL-------------PGA-PGYVSAPAMPP-MLPPPGAPQVPGQLNTLPRPPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPS 189
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQ       HM+     V RP L P+LP P +P  G  Q PG+ PL+PG+RPP+ P P              PGA PG +  P  PP  +P PGAP     +   P P     PP   G   AP  N A      A+YQ NPPAP+
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQAGAPFNQHMLTFPGAVARPRL-PILPTPGMPH-GFPQAPGA-PLMPGVRPPILPAPGIPGYPGGPPTMLQPGAPPGSMPQPGAPPGSMPQPGAPPGSMPMQMAPLPRPPTLPPPTSGVPGAPIPNSA---APPAIYQTNPPAPA 203
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q16IW3|RU1C_AEDAE (U1 small nuclear ribonucleoprotein C OS=Aedes aegypti OX=7159 GN=AAEL013527 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.097e-23
Identity = 53/113 (46.90%), Postives = 65/113 (57.52%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVF 113
            MP+YYCDYCDTYLTHDSPSVRK H  G KHK NV+ YYQ++ E+Q Q LID          AAF+   +A N      P     +PPP + +P     PG  P +P   PP+ 
Sbjct:    1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID-------ATTAAFKAGKIAQNPFSAGPPKPNVAIPPPSMGMPAR---PGMIPGMPAGAPPLL 103
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|A7SEP9|RU1C_NEMVE (U1 small nuclear ribonucleoprotein C OS=Nematostella vectensis OX=45351 GN=v1g244745 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.321e-23
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQ 65
            MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR YYQ++ E+Q Q+LIDQ         AAFQ
Sbjct:    1 MPKYYCDYCDTFLTHDSPSVRKTHNNGRKHKENVRFYYQKWMEEQAQTLIDQ-------TTAAFQ 58
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|E3X5D6|RU1C_ANODA (U1 small nuclear ribonucleoprotein C OS=Anopheles darlingi OX=43151 GN=AND_004369 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.984e-23
Identity = 52/113 (46.02%), Postives = 65/113 (57.52%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVF 113
            MP+YYCDYCDTYLTHDSPSVRK H  G KHK NV+ YYQ++ E+Q Q LID          AA++   +A N      P     +PPP + +P     PG  P +P   PP+ 
Sbjct:    1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID-------ATTAAYKAGKIAQNPFTAGPPKPNISIPPPTMNMPPR---PGIIPGMPAGAPPLL 103
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8JGS0|RU1C_DANRE (U1 small nuclear ribonucleoprotein C OS=Danio rerio OX=7955 GN=snrpc PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.999e-23
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQ 66
            MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+         AAFQQ
Sbjct:    1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQQ 59
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|B0JYS7|RU1C_XENTR (U1 small nuclear ribonucleoprotein C OS=Xenopus tropicalis OX=8364 GN=snrpc PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.402e-23
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQ 66
            MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+         AAFQQ
Sbjct:    1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQQ 59
[Close]
BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q03369|RU1C_XENLA (U1 small nuclear ribonucleoprotein C OS=Xenopus laevis OX=8355 GN=snrpc PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.402e-23
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQ 66
            MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+         AAFQQ
Sbjct:    1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------TTAAFQQ 59
[Close]
BLAST of Vigun07g076100.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:1385747-1387331 FORWARD LENGTH=207)

HSP 1 Score: 161.384 bits (407), Expect = 7.685e-50
Identity = 96/154 (62.34%), Postives = 106/154 (68.83%), Query Frame = 0 
Query:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPGSQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPRPPSL 154
            MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ   +QQVG  +N  M+ RP  P                PGS P+  GMRPPV PRP+    GY+  P +P M+ PPGAP  P   N + RPP +
Sbjct:    1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQTGGYQQVGAVFNQHMLARPRPP------------MMLPPGSMPM--GMRPPVLPRPMMPPQGYMPPPGVPQMMAPPGAPLPPPPQNGILRPPGM 140
The following BLAST results are available for this feature:
BLAST of Vigun07g076100.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3UY56|A0A1S3UY56_VIGRR2.241e-13996.14U1 small nuclear ribonucleoprotein C OS=Vigna radi... [more]
tr|A0A0S3SS67|A0A0S3SS67_PHAAN2.981e-13996.14U1 small nuclear ribonucleoprotein C OS=Vigna angu... [more]
tr|A0A0S3SSG2|A0A0S3SSG2_PHAAN5.792e-13695.17U1 small nuclear ribonucleoprotein C OS=Vigna angu... [more]
tr|A0A0L9TWM5|A0A0L9TWM5_PHAAN5.792e-13695.17U1 small nuclear ribonucleoprotein C OS=Phaseolus ... [more]
tr|V7BFF2|V7BFF2_PHAVU3.002e-13595.17U1 small nuclear ribonucleoprotein C OS=Phaseolus ... [more]
tr|A0A4D6N236|A0A4D6N236_VIGUN3.402e-13194.69U1 small nuclear ribonucleoprotein C OS=Vigna ungu... [more]
tr|A0A445IGV5|A0A445IGV5_GLYSO1.367e-10593.24U1 small nuclear ribonucleoprotein C OS=Glycine so... [more]
tr|I1L7Y6|I1L7Y6_SOYBN1.367e-10593.24U1 small nuclear ribonucleoprotein C OS=Glycine ma... [more]
tr|A0AA86TIN2|A0AA86TIN2_9FABA3.399e-10595.65Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A4D6MYJ3|A0A4D6MYJ3_VIGUN2.404e-10394.20U1 small nuclear ribonucleoprotein C OS=Vigna ungu... [more]
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BLAST of Vigun07g076100.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|F6HQ26|RU1C_VITVI9.989e-8869.01U1 small nuclear ribonucleoprotein C OS=Vitis vini... [more]
sp|C5XYW4|RU1C2_SORBI1.193e-4955.76U1 small nuclear ribonucleoprotein C-2 OS=Sorghum ... [more]
sp|Q56XE4|RU1C_ARATH7.380e-4962.34U1 small nuclear ribonucleoprotein C OS=Arabidopsi... [more]
sp|C5XZK6|RU1C1_SORBI2.540e-4556.94U1 small nuclear ribonucleoprotein C-1 OS=Sorghum ... [more]
sp|Q16IW3|RU1C_AEDAE1.097e-2346.90U1 small nuclear ribonucleoprotein C OS=Aedes aegy... [more]
sp|A7SEP9|RU1C_NEMVE1.321e-2366.15U1 small nuclear ribonucleoprotein C OS=Nematostel... [more]
sp|E3X5D6|RU1C_ANODA3.984e-2346.02U1 small nuclear ribonucleoprotein C OS=Anopheles ... [more]
sp|Q8JGS0|RU1C_DANRE3.999e-2363.64U1 small nuclear ribonucleoprotein C OS=Danio reri... [more]
sp|B0JYS7|RU1C_XENTR4.402e-2363.64U1 small nuclear ribonucleoprotein C OS=Xenopus tr... [more]
sp|Q03369|RU1C_XENLA4.402e-2363.64U1 small nuclear ribonucleoprotein C OS=Xenopus la... [more]
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BLAST of Vigun07g076100.1 vs. Araport11
Analysis Date: 2024-08-19 (Blastp of Vigna unguiculata L. Walp IT97K-499-35 v1.2 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|7.685e-5062.34Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata L. Walp IT97K-499-35 genome v1.2
Date Performed: 2024-08-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.160.60:FF:000059coord: 1..61
e-value: 2.5E-34
score: 119.0
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 1..60
e-value: 2.0E-30
score: 106.6
IPR017340U1 small nuclear ribonucleoprotein CPIRSFPIRSF037969U1-Ccoord: 1..207
e-value: 8.0E-38
score: 123.7
IPR017340U1 small nuclear ribonucleoprotein CPANTHERPTHR31148U1 SMALL NUCLEAR RIBONUCLEOPROTEIN Ccoord: 1..194
IPR017340U1 small nuclear ribonucleoprotein CHAMAPMF_03153U1_Ccoord: 1..174
score: 12.018295
IPR013085U1-C, C2H2-type zinc fingerPFAMPF06220zf-U1coord: 1..38
e-value: 2.1E-18
score: 77.1
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 4..36
score: 12.509912
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 1..55

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2; Name=Vigun07g076100.1; organism=Vigna unguiculata; type=mRNA; length=624bp
ATGCCTCGGTATTACTGTGACTACTGCGACACCTATTTGACCCACGATTC
TCCATCTGTTAGAAAGCAGCACAATGCGGGTTACAAACACAAGGCAAATG
TGAGAACCTACTACCAGCAATTTGAAGAACAACAAACACAGAGTTTAATT
GATCAGAGGATCAAAGAACATCTTGGGCAAGCTGCAGCATTTCAGCAGGT
TGGTGTAGCTTATAATCATATGATGGTTCAGAGGCCAAACCTTCCTCCTG
TGTTGCCACCACCAAGACTGCCTATTCCTGGAAATGCACAAGTACCTGGA
AGTCAACCACTACTGCCAGGGATGAGACCACCTGTCTTTCCTAGACCACT
TCCTGGGGCACCAGGATATGTTTCTGCCCCTGCCATGCCTCCAATGTTAC
CCCCTCCTGGTGCTCCCCAGGTGCCGGGTCAACTTAATACCCTACCAAGG
CCCCCTTCATTAGCTCCCCCTCCAACTGCTCCTGGTAGCACTGCTGCCCC
AGCTTCCAATGGTGCTCCCTCTATGTTATCGTCAGCAATGTACCAAGCCA
ATCCACCAGCACCGTCGTCTGGAGGTTATGATAATTACAATGCCAGTGCT
CAAGCACCTGAGGGCAATCACTGA
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protein sequence of drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2

>drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2; Name=drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2; organism=Vigna unguiculata; type=polypeptide; length=208bp
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLI
DQRIKEHLGQAAAFQQVGVAYNHMMVQRPNLPPVLPPPRLPIPGNAQVPG
SQPLLPGMRPPVFPRPLPGAPGYVSAPAMPPMLPPPGAPQVPGQLNTLPR
PPSLAPPPTAPGSTAAPASNGAPSMLSSAMYQANPPAPSSGGYDNYNASA
QAPEGNH*
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mRNA from alignment at Vu07:10094477..10097298-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2; Name=Vigun07g076100.1; organism=Vigna unguiculata; type=mRNA; length=2822bp; location=Sequence derived from: Vu07:10094477..10097298- (Vigna unguiculata
ATGTATAATAAATCATTTCCTCATGGAATCCGGGAACATTCGTGCTCTGG
GCATATAGTCTCTGTTCTATCGCCGATTGTTTCGATTTTTCACACTTTCC
TTCCTGAACATCAAGCTCAAGTTACTAACGTCATTTATTCCTCTTATTAT
TATTATTATTTTTTTTTTAATTTTTTAGGTTTTAAGTTTTTTCTCCTTTC
ACGGTTTTGATAATTTGCTTCACTTCTAGGGTTTTTGGCGGGACTCATTG
TCATTGAAACAGCATGCCTCGGTACATAGAAAATTGTGGATTCCTTTATT
TTTCAGTTTTCATGAATCTGCGGTATTCATTTTTTTTCATGATCGATTTT
GCATTGCAGGTATTACTGTGACTACTGCGACACCTATTTGACCCACGATT
CTGTAAGTTGTTTACCTCATCAATTGTGTTTCCCCCTTTACTCTGAGTTA
GTTTAGTCTAGTGAATTTGTTGCATTTAGTTTTGTACCTGCAAACTGCAT
TTCAAAATAGTTTATTGTTTCTGGCTAGAAAGATTCTCTACCTTGCAATA
ATAAGATGCAGCTGCAAGAATGTGCAGTGTTTCCTATGTCGTGTGGGATT
CTCAGGTGTAGTGACCTCTTTATTATGGCTAAGGTTTTGTGCATGAAACC
CCCTGCATCCTCATTTTTTTTTACTCAAATAATAGAGGGATGAAGTATAA
TTTGGGATGCAAAACAAACTCACAGGTAGAAATTTGAAGGATTTTGTAAG
ATGTGTCATGATTTTAAGAAGGGTGTGCATTTGTGATTATCTGATCTTGG
GTGAAAAATAATTTTTTTATTGGTATTTTTTGAGTGTAAGAGGGTTTATG
ATGATTTAGTATGAGAATTTGTTGTTTTTTTATTTAGAAATGATGATTTT
AATGTTTTAGGTGAAGGAAAACTGATGAAAGGATTTTGTTGTGGCAATTA
ATAGAATTGGGGGATTAACTTTGATGTTTTTGGGGGACCAAATTGCACAT
TAATTACGGTAGAGGAACTAAAGATGTGCTTTATCCATTAGTGTTTCATG
AAGGTTTGTTAGCCACATTGTTTATGTCCTATTGCAGCCATCTGTTAGAA
AGCAGCACAATGCGGGTTACAAACACAAGGTACCATGAAATTTCTGACTT
CTTGGAATAAATGTACTACAATGTACACCATACTCATGGCGTTTAGTATC
TGATCATATCTTCAGGCAAATGTGAGAACCTACTACCAGCAATTTGAAGA
ACAACAAACACAGAGTTTAATTGATCAGAGGATCAAAGAACATCTTGGGC
AAGCTGCAGCATTTCAGCAGGTTGGTGTAGCTTATAATCATATGATGGTT
CAGAGGCCAAACCTTCCTCCTGTGTTGCCACCACCAAGACTGCCTATTCC
TGGAAATGCACAAGTACCTGGAAGTCAACCACTACTGCCAGGGATGAGAC
CACCTGTCTTTCCTAGACCACTTCCTGGGGCACCAGGTCAATATAATCTT
GCACATTGCTTTTTGTGAAGTTCATAAAGCTTCCATCTCCTCTTATATTC
AATCTGGTTTGGGCTATCATATTTATGTCTCTGCATTTTACATGCAGACA
TGTGGTTCTTTCAATTATTATCTTAACAGTGATTCTTGTTATTCATATGC
CAAGGGCTAACTACAAATTAATTTTGGTTTATGTTGTTGCAATGACCTTG
TTATTTAAATCTCCTTTAATATGGTTGTTCTTTCTTTGGATTTTATTTGA
AATAATTACGTTAAATAAATAAAGTAAGTTTTGGACAAGAAAACCTACAT
TTGCTTTTATCTGTTTCTTCTCTAAGCTGTAACTTCTATCTAATGCTGAA
AGTTCTGAAAAACTTGATAGCCAAGTTCAAGCATTATACATTTGTTCTTT
TATTATCCAGTATCTGATGTAACTGGTTTTCAATTGGAATATACAGGATA
TGTTTCTGCCCCTGCCATGCCTCCAATGTTACCCCCTCCTGGTGCTCCCC
AGGTGCCGGGTCAACTTAATACCCTACCAAGGCCCCCTTCATTAGCTCCC
CCTCCAACTGCTCCTGGTAGCACTGCTGCCCCAGCTTCCAATGGTGCTCC
CTCTATGTTATCGTCAGCAATGTACCAAGCCAATCCACCAGCACCGTCGT
CTGGAGGTTATGATAATTACAATGCCAGTGCTCAAGCACCTGAGGGCAAT
CACTGACCTGGTTAAACTGGTATGTTATTTTATATTAATTATTGAATTTT
ATGAAATACAATACTTGTTCAACTGTAGCTGGAATCACGCATCGACTGAA
TTTCAACTAATTAACATTCTTTCCTATTTCATTTATTTGTATTTGCAGTT
CTCTCTGCATAATGCTATCTCTATTGGAATCTTAAGACTAGAGCTATTTG
TGCTCTACCTACTCGCTGTTCATCAAACGAGGACTTGCCATTTGTGGTCA
TATGTAGAGTAGTCATTGGTATGTAGAATGTCCATCAGTTTGAATGCACA
AAAAAAAAATCTTATAAGTTACGTTTTTGAGGAAGATTTATGTTCAGTAC
CAATCGTTATAACTTTCCAATGTGGCCTGTTGATGATAGCTTCTAGTTTA
TTTTTAAACCGAGTTTCATTAGTGATAAATGTACTTGTATTTTAGGTTTA
GAGACAAATTCATTATTTCGTATTGTGTTATTGGCTCTGAATTCCTAAAA
TCTTTGCCTATTGATCACAACAGAAGTCTTATTTCCCAATGTAAGGTCGG
TTACATAATTCACATATATGCCATTTTCAAATGTCAAGTCCAAGTCTTCA
TAGATATTTCTCACCACGAATC
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Coding sequence (CDS) from alignment at Vu07:10094477..10097298-

>drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2 ID=drVigUngu.IT97K.1.2.Vigun07g076100.1.v1.2; Name=Vigun07g076100.1; organism=Vigna unguiculata; type=CDS; length=624bp; location=Sequence derived from: Vu07:10094477..10097298- (Vigna unguiculata
ATGCCTCGGTATTACTGTGACTACTGCGACACCTATTTGACCCACGATTC
TCCATCTGTTAGAAAGCAGCACAATGCGGGTTACAAACACAAGGCAAATG
TGAGAACCTACTACCAGCAATTTGAAGAACAACAAACACAGAGTTTAATT
GATCAGAGGATCAAAGAACATCTTGGGCAAGCTGCAGCATTTCAGCAGGT
TGGTGTAGCTTATAATCATATGATGGTTCAGAGGCCAAACCTTCCTCCTG
TGTTGCCACCACCAAGACTGCCTATTCCTGGAAATGCACAAGTACCTGGA
AGTCAACCACTACTGCCAGGGATGAGACCACCTGTCTTTCCTAGACCACT
TCCTGGGGCACCAGGATATGTTTCTGCCCCTGCCATGCCTCCAATGTTAC
CCCCTCCTGGTGCTCCCCAGGTGCCGGGTCAACTTAATACCCTACCAAGG
CCCCCTTCATTAGCTCCCCCTCCAACTGCTCCTGGTAGCACTGCTGCCCC
AGCTTCCAATGGTGCTCCCTCTATGTTATCGTCAGCAATGTACCAAGCCA
ATCCACCAGCACCGTCGTCTGGAGGTTATGATAATTACAATGCCAGTGCT
CAAGCACCTGAGGGCAATCACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR017340U1_snRNP-C
IPR013085U1-CZ_Znf_C2H2
IPR000690Matrin/U1-C_Znf_C2H2
IPR036236Znf_C2H2_sf
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0000387spliceosomal snRNP assembly
Vocabulary: Cellular Component
TermDefinition
GO:0005685U1 snRNP
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding