Ca_19218, Ca_19218_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_19218
Unique NameCa_19218_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length1104
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:41634302..41635405 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR399Pisum sativum Cameor genome v1aPisum sativum
capsR406Pisum sativum Cameor genome v1aPisum sativum
cavuR404Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caccR0703Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0243Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cazwsR359Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR372Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR393Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR378Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR406Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR379Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR442Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR409Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR449Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavssR417Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR430Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR447Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR453Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR381Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR194Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL142Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL150Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR380Cicer arietinum
cacarR403Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat5g102760.1Pisum sativum Cameor genome v1aPisum sativum
Psat05G0302400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
jg53384.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.2g086280.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.2g104680.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004502113.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_19218-CDS1Ca_19218-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_19218_v1.0_kabuliCa_19218_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_19218 vs. SwissProt
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.995e-41
Identity = 124/354 (35.03%), Postives = 166/354 (46.89%), Query Frame = 1 
Query:   25 YWCHACSQIVNPVMEV---EMKCPVCQSGFVEEMNSAAGISEMQGIGEMQ----NIPENDFG---SDRAASLWAPILLGMMSNPXXXXXXXXIELENDYNSGSRDDDNGGVGHYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSDDHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINE-NL-----QCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDNAEGDNEGRNSSGGR-------RFSFPWPF 1017
            ++C+ C++ VN  +     +  CP+C  GF+EE ++    +  QG G +     +IP +D     SD  ASL    LL   S+         I+  N   SG      G    +D                IQ  L  +R+                         VI  NP +Q   +  +                +GDYF+GPGL+ L+Q LAENDPNRYGTPPA K A+EALP V I + NL     QC+VC+DDFE G+EAK+MPCKH +H  C+LPWLELH+SCPVCR +L  D+   +       R  R  + T   N +GDN G+ S G         R S PWPF
Sbjct:   23 FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNP---NPNQGSGFLNPNPNSIPFHDLFLTLSDPFASLLP--LLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTF------------IQNHLNDLRSS------------------GAQIEFVIQNNPSDQGFRLPAN----------------IGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYE-------RRVRGAQGTSGGN-DGDNSGQRSDGDNRTVERSFRISLPWPF 317
[Close]
BLAST of Ca_19218 vs. SwissProt
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.868e-39
Identity = 80/156 (51.28%), Postives = 106/156 (67.95%), Query Frame = 1 
Query:  583 GSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENL------QCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDNAEGDNEGRNSSGGR---RFS--FPWPF 1017
            G+ GDYF GPGL+ L+Q LAENDPNRYGTPPA K A++ALPTVK+ +++      QC+VC+D+FE GS+ K+MPCKH FH  C+LPWLELH+SCPVCRF+L  D+   +      +R+Q          ++G  +G+ S  G+   RFS   PWPF
Sbjct:  160 GNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYE------NRSQ---------GSQGSGDGQGSVEGQQTPRFSIQLPWPF 300
[Close]
BLAST of Ca_19218 vs. SwissProt
Match: RN115_HUMAN (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 3.781e-24
Identity = 91/318 (28.62%), Postives = 138/318 (43.40%), Query Frame = 1 
Query:   16 AARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIELENDYNSGSRDDDNGGVGHYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSDDHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGP-GLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINEN-----LQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQR-EDENTVHD 948
            A R++CH C   V+P +  E  CP C+SGF+EE+   +      G   + N     F     A LW     G + +             +  +  +R ++ G   H D              A   +L  G R      S       D          H+     F     + GS         +HS   + GDY  G  GLD ++  L     N  G PPA KE + +LPTV + +      L+C VC +D+ V  E +++PC H FHS+CI+PWLELH +CPVCR  L  ++S + S ++ +S + R  +++ +HD
Sbjct:   17 AHRFFCHFCKGEVSPKLP-EYICPRCESGFIEEVTDDSSFLGGGG-SRIDNTTTTHF-----AELW-----GHLDHTMFFQDFRPFLSSSPLDQDNRANERGHQTHTDFWG-----------ARPPRLPLGRRYRSRGSSRP-----DRSPAIEGILQHIFA--GFFANSAIPGSPHPFSWSGMLHS---NPGDYAWGQTGLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQSTEASASNRFSNDSQLHD 300
[Close]
BLAST of Ca_19218 vs. SwissProt
Match: RN115_MOUSE (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 7.883e-22
Identity = 52/126 (41.27%), Postives = 79/126 (62.70%), Query Frame = 1 
Query:  592 GDYFVGP-GLDLLLQHLAENDPNRYGTPPAPKEAVEALPTV-----KINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQR-EDENTVHD 948
            GDY  G  GLD ++  L     N  G PPA KE + +LPTV     ++N  L+C VC +D+ V  + +++PC H FHS+CI+PWLELH +CPVCR  L  ++S + + +S +S + R  +++ +HD
Sbjct:  177 GDYAWGQTGLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQTQSSEASASNRFSNDSQLHD 301
[Close]
BLAST of Ca_19218 vs. SwissProt
Match: RN126_HUMAN (E3 ubiquitin-protein ligase RNF126 OS=Homo sapiens GN=RNF126 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 9.637e-20
Identity = 58/155 (37.42%), Postives = 78/155 (50.32%), Query Frame = 1 
Query:  574 STIGSLG----------DYFVGP-GLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINEN-----LQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQD-----SVASRSSRNQREDENTVHDNAEGDNEGR 975
            +TI SLG          DY  G  GLD ++  L     N  G PPA KE ++ALPTV + E      L+C VC DD+ +G   +++PC H FH  CI+PWLE H SCPVCR  L    +  +      V+  SS +     +  ++NA     GR
Sbjct:  161 ATIPSLGPWGVLHSNPMDYAWGANGLDAIITQLLNQFENT-GPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATWSPLGR 314
[Close]
BLAST of Ca_19218 vs. SwissProt
Match: RN126_BOVIN (E3 ubiquitin-protein ligase RNF126 OS=Bos taurus GN=RNF126 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.644e-19
Identity = 53/129 (41.09%), Postives = 69/129 (53.49%), Query Frame = 1 
Query:  595 DYFVGP-GLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINEN-----LQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQD---------SVASRSSRNQREDEN 936
            DY  G  GLD ++  L     N  G PPA KE ++ALPTV + E      L+C VC DD+ +G   +++PC H FH  CI+PWLE H SCPVCR  L    +  D         S +S SS +   +EN
Sbjct:  181 DYAWGANGLDAIITQLLNQFENT-GPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATDPPGLAGVSFSSSSSSSSSSPGNEN 308
[Close]
BLAST of Ca_19218 vs. SwissProt
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.804e-19
Identity = 58/165 (35.15%), Postives = 90/165 (54.55%), Query Frame = 1 
Query:  526 IVQGSYDSN---RDQSDIHSTIGSLGDYFV-GPGLDLLLQHLAENDPN----RYGTPPAPKEAVEALPTVKINEN-----LQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDNAEGDNEGRNS 981
            I+ G  D++   R +SD ++  G+  DY     G + LLQ+LAE D      R G PPA K A+EAL T +++ +     + C+VC D   +G   K++PC H +H  CI+PWL   +SCPVCRFQL  D+++ +         +++  +TV D+A   +    S
Sbjct:  177 ILMGIEDNSIEFRMESDRYA--GNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYE-------EERKKRTSTVSDSAAASSSSSTS 332
[Close]
BLAST of Ca_19218 vs. SwissProt
Match: RN126_XENTR (E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.783e-19
Identity = 52/137 (37.96%), Postives = 70/137 (51.09%), Query Frame = 1 
Query:  595 DYFVGP-GLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINEN-----LQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESK-----------QDSVASRSSRNQREDENTVHDNA 954
            DY  G  GLD ++  L     N  G PPA  E ++ALPT++I E      L+C VC +D+ VG   +++PC H FH+ CI+PWLE H +CPVCR  L    +              S  S SS     DEN   +N+
Sbjct:  176 DYAWGANGLDTIITQLLNQFENT-GPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATNPPGLTEMTFSSSSTSSSSSTSPTDENNAANNS 311
[Close]
BLAST of Ca_19218 vs. SwissProt
Match: RN126_MOUSE (E3 ubiquitin-protein ligase RNF126 OS=Mus musculus GN=Rnf126 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.246e-19
Identity = 51/135 (37.78%), Postives = 72/135 (53.33%), Query Frame = 1 
Query:  595 DYFVGP-GLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINEN-----LQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQD----------SVASRSSRNQREDENTVHDN 951
            DY  G  GLD ++  L     N  G PPA KE ++ALPTV + E      L+C VC +D+ +G   +++PC H FH +CI+PWLE H SCPVCR  L    +  +          S +S SS +   +EN   ++
Sbjct:  180 DYAWGANGLDTIITQLLNQFENT-GPPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTGVGFSSSSSSSSSSSPSNENATSNS 313
[Close]
BLAST of Ca_19218 vs. SwissProt
Match: R126B_XENLA (RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.246e-19
Identity = 52/137 (37.96%), Postives = 71/137 (51.82%), Query Frame = 1 
Query:  595 DYFVGP-GLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINEN-----LQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLR-----------ADESKQDSVASRSSRNQREDENTVHDNA 954
            DY  G  GLD ++  L     N  G PPA  + ++ALPT++I E      L+C VC +D+ VG   +++PC H FH+ CI+PWLE H +CPVCR  L             D +   S  S SS     DEN   +N+
Sbjct:  177 DYAWGANGLDTIITQLLNQFENT-GPPPADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATNPPGLTDMTFSSSSTSSSSSTSPTDENNTANNS 312
[Close]
BLAST of Ca_19218 vs. TrEMBL
Match: G7J9L6_MEDTR (RING finger protein OS=Medicago truncatula GN=MTR_3g083480 PE=4 SV=1)

HSP 1 Score: 541.962 bits (1395), Expect = 1.285e-151
Identity = 272/365 (74.52%), Postives = 293/365 (80.27%), Query Frame = 1 
Query:   13 MAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIELENDYNSGSRDDDNGGVGHYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSDDHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVH--DNAEGDNEGRNSSGGRRFSFPWPFNGLFXXXXXXXXXXXXNANGNGTQSERS 1101
            MAARYWCHACSQIV+PVM +E+KCP+CQSGF+EEM+SA GIS++Q      N PE DFG DR+ SLWAPILLGMM NP        IELE+DY SG+RDDD+GGVGHYD              ATIQQLLQGIRAGLTSESHENTDSDD V        HVILINPFNQTIIVQGSYDSNRDQSD H+ IG+LGDYFVGPGLDLLLQHL+ENDPNRYGTPPAPKEAVE+LPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCR QLR DE KQDS  SR+ RNQR+DE   H   NAEGD+EGR+ SGGRRFSFPWPFNGLF            NANGNGTQSER+
Sbjct:    1 MAARYWCHACSQIVSPVMGMEIKCPLCQSGFIEEMSSATGISDLQ------NTPETDFGVDRSPSLWAPILLGMMGNPRLRRRLRRIELEDDYESGNRDDDHGGVGHYDRELESILRRRRRSSATIQQLLQGIRAGLTSESHENTDSDDRVRERERE--HVILINPFNQTIIVQGSYDSNRDQSDNHNPIGALGDYFVGPGLDLLLQHLSENDPNRYGTPPAPKEAVESLPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQLRVDEPKQDSDVSRNHRNQRDDEIIGHANANAEGDSEGRSPSGGRRFSFPWPFNGLF-----SSSSSSSNANGNGTQSERN 352
[Close]
BLAST of Ca_19218 vs. TrEMBL
Match: I1MY79_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 447.203 bits (1149), Expect = 4.308e-123
Identity = 231/345 (66.96%), Postives = 252/345 (73.04%), Query Frame = 1 
Query:   13 MAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIELEN---DYNSGSRDDDNGGVGHYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSDDH--VXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDN-AEGDNEGRNSSGGRRFSFPWPFNGLF 1029
            MAARYWCH CSQ+VNP+M++E++CP CQSGFVEEM +    S +       N  E+DF SDRA SLWAPILLGMM NP        I  +N   DY  G  D  +G    YD              ATI QLLQGIR GL SES+ENTD  DH           H+ILINP NQTIIVQGSY+SNRDQSD HS++GSLGDYF GPG D+LLQHLAENDPNRYGTPPA KEA+EALPTV INEN QCSVCLDDFEVGSEAKEMPCKHRFHS CILPWLELHSSCPVCR QL  DESKQDS  SR SR+QREDE+  HDN  E D EGRN+SGGRRFSFPWPFNGLF
Sbjct:    1 MAARYWCHMCSQMVNPIMDMEIRCPFCQSGFVEEMGNTPSSSSIP------NTSESDFESDRALSLWAPILLGMMGNPRHPRRLRQIANDNGNRDYVDGVAD--HGRETEYDQEFESILRRRRNS-ATILQLLQGIRTGLASESYENTDGHDHDREREREREREHMILINPLNQTIIVQGSYESNRDQSDNHSSVGSLGDYFTGPGFDILLQHLAENDPNRYGTPPAQKEAIEALPTVIINENSQCSVCLDDFEVGSEAKEMPCKHRFHSGCILPWLELHSSCPVCRLQLPLDESKQDSDLSRDSRSQREDESIEHDNDEERDGEGRNASGGRRFSFPWPFNGLF 336
[Close]
BLAST of Ca_19218 vs. TrEMBL
Match: M5VYQ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007335mg PE=4 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.655e-114
Identity = 219/348 (62.93%), Postives = 247/348 (70.98%), Query Frame = 1 
Query:   19 ARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIELENDYNSGSRDDD--NGGVGHYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSD-------DHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHD--NAEGDNEGRNSSGGRRFSFPWPFNGLF 1029
            ARYWCH CSQ+V+P+MEVEMKCP CQSGF+EEMNS    S            ++DFGSDRA SLWAPILLGMM+NP        ++ + D +  + D +  +GG    D              ATI QLLQGIRAG  SES EN++SD       D           VILINPF+QTIIVQGSYDSN+ Q++ H+ +GSLGDYF+GPGLDLLLQHLAENDPNRYGTPPA KEAVEALPTV I ENLQCSVCLDDFE G EAKEMPCKH+FHS CILPWLELHSSCPVCRFQL ADESK+DS  SR+S +QRE EN   D    EGD +GRN S GRRFS PWPFNGLF
Sbjct:    4 ARYWCHVCSQMVDPIMEVEMKCPFCQSGFIEEMNSNTRDSHEA---------DSDFGSDRALSLWAPILLGMMNNPHRRRRLRRLDFDEDEDDDNDDGEARHGGDTELDRELESIIRRRRRNSATILQLLQGIRAGSASES-ENSESDRDRDRDRDRERERERERERVILINPFSQTIIVQGSYDSNQGQNNNHTPMGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVTIKENLQCSVCLDDFEAGVEAKEMPCKHKFHSGCILPWLELHSSCPVCRFQLPADESKRDSDNSRNSSDQRESENIGGDGGGVEGDGDGRNGS-GRRFSIPWPFNGLF 340
[Close]
BLAST of Ca_19218 vs. TrEMBL
Match: B9GXX2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_413045 PE=4 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 3.664e-106
Identity = 203/355 (57.18%), Postives = 240/355 (67.61%), Query Frame = 1 
Query:   13 MAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIELENDYNSGSRDDDNGGVGHYDXXXXXXXXXXXXXX-----ATIQQLLQGIRAGLTSESHENTDSD---DHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDN--------AEGDNEGRNSSGGRRFSFPWPFNGLF 1029
            MAARYWCH CSQ+VNP+M VE+KCP CQ+GF+E+M  + G ++         +P+++FGSDRA SLWAPILLGM+ N         +E E D   G+ D +    G  +                   ATI QLLQGIRAG+     EN + D   D V         VILINPFNQ+IIVQGSYDSN  Q+   + IGSLGDY +GPGLDLLLQHLAENDPNRYGTPPA KEA+EALPTV + E LQCSVCLDDFE+G+EA+EMPCKH+FHS CILPWLELHSSCPVCR QL ADESK DS  SR++ +QR+ E+T  ++         EGD EGR S  GRRFSFPWPFN LF
Sbjct:    1 MAARYWCHMCSQMVNPIMGVEIKCPFCQNGFIEDMIDSTGDNQ---------VPDSEFGSDRALSLWAPILLGMVGNSHRRRRLRRVEYEED-EDGNDDGEANHAGEPEFEREIESFMRRRRRSRRNSATILQLLQGIRAGILVSESENLEGDRDRDRVRDMNRERERVILINPFNQSIIVQGSYDSNNVQNQNQNAIGSLGDYVIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVTVKEPLQCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKLDSERSRNTFDQRDSESTNSESNISNGINVEEGDGEGR-SGNGRRFSFPWPFNSLF 344
[Close]
BLAST of Ca_19218 vs. TrEMBL
Match: F6GUP5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g00120 PE=4 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 9.977e-104
Identity = 201/370 (54.32%), Postives = 243/370 (65.68%), Query Frame = 1 
Query:    1 MDETMAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIELENDYNSGSRDDDN-GGVGHYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSD---DHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRS-SRNQREDENTVHDNA-EGDNEGRNSSGGRRFSFPWPFNGLFXXXXXXXXXXXXNANGNGTQS 1092
            M++ M  RYWCH+CSQ+VNP+ E E KCP+CQ GF+E+++  A            N  ++D  SDR  SLWAPILLGMM NP         ++E++       +   GG    D              ATI QLLQGIRAG+ SES EN+++D   D           +ILINPFNQTIIVQGS+DSN+ Q+   +TIGSLGDYF+GP LDLLLQHLAENDPNRYGTPPA K+A+EA+PTVKI ENLQCSVCLDDFE+G+EA+EMPCKH+FHS CILPWLELHSSCPVCRFQ+ ADESK DS AS + S N  E  N  H ++ EGD +GR S  GRR +F WPF  LF             +NGN + S
Sbjct:    1 MEDAMGGRYWCHSCSQVVNPIAEAEPKCPLCQDGFIEDIDGTASRDH--------NDSDSDLASDRTLSLWAPILLGMMGNPRRRRRFRREDIEDEEEDNEDGEGRRGGETELDRELDSIIRRRRRSSATILQLLQGIRAGMVSES-ENSENDRDRDRDRERERERERLILINPFNQTIIVQGSFDSNQAQNQNQNTIGSLGDYFIGPSLDLLLQHLAENDPNRYGTPPAQKDAIEAMPTVKIKENLQCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQIAADESKLDSDASPNVSSNSSERSNNGHGSSEEGDGDGR-SGNGRRSTFRWPFTSLF------SSQGSQTSNGNSSSS 354
[Close]
BLAST of Ca_19218 vs. TrEMBL
Match: B9SBM6_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0342820 PE=4 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 2.717e-101
Identity = 206/377 (54.64%), Postives = 236/377 (62.60%), Query Frame = 1 
Query:    1 MDETMAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIELENDYNSGSRDDDN-------GGVGHYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSD-----DHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDS---------------------VASRSSRNQREDENTVHDN-AEGDNEGRNSSGGRRFSFPWPFNGLF 1029
            M+E +AARYWC+ CSQ+VNP+ME E+KCP C  GFVEEM+S    ++          P++DF SDRA SLWAP+LLGMM NP         E E D      DDDN       GG    D              ATI QLLQGIRAG+ SES EN++ D     D           VILINP N+TII QGSYDS+  Q   ++ IGSLGDYF+GPGLDLLLQHLAENDPNRYGTPPA KEA+EALPTV I    QCSVCLDDFE+G+EAKEMPCKHRFH  CILPWLELHSSCPVCRFQL A+ESK DS                      +S +  N  +D+N    N  EG+ EGRN + GRRFSF WPFN LF
Sbjct:    1 MEEALAARYWCYLCSQMVNPIMEAEIKCPFCLGGFVEEMSSNTRDNQE---------PDSDFSSDRALSLWAPVLLGMMGNPRRRRRLRRREFEED------DDDNDDGETRHGGEIDIDRELESFMRRRRRSSATILQLLQGIRAGMASES-ENSEGDRDRDGDRDRERDRERDRVILINPSNRTIIFQGSYDSSNGQGQNNAPIGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVTIKNTSQCSVCLDDFEIGTEAKEMPCKHRFHDVCILPWLELHSSCPVCRFQLPAEESKFDSAERLQNHSDQRGSYNNNISTTTSSNNINNNDDDDNNHSSNIEEGEGEGRNGN-GRRFSFLWPFNSLF 360
[Close]
BLAST of Ca_19218 vs. TrEMBL
Match: B9GLB5_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_177749 PE=4 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.153e-98
Identity = 195/346 (56.36%), Postives = 231/346 (66.76%), Query Frame = 1 
Query:   49 IVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIELENDYNSGSRDDDNGGVG--------HYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSD---DHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDN--------AEGDNEGRNSSGGRRFSFPWPFNGLF 1029
            +VNPVMEVE+KCP CQSGF+EEM+S+ G ++         +P+++FGSDRA SLWAPILLGMM N         +E    Y  G  D+D+G           H                ATI QLLQGIRAG+ +   EN++ D   +           VILINPFNQ IIVQGSYDSN D++   + +GS GDYF+GPGLDLLLQHLA+NDPNRYGT PA KEAVEALPTV I E LQCSVCLDDFE+GS+A+EMPCKH+FHS CILPWLELHSSCPVCR QL ADESK DS  +R+S ++RE ENT  ++         EGD+E R S  GR FSFPWPFN LF
Sbjct:    1 MVNPVMEVEIKCPFCQSGFIEEMSSSTGDTQ---------VPDSEFGSDRALSLWAPILLGMMGNSRRRRRLRRME----YEEGEDDNDDGEANLGGETEFEHEIESFIRRRRRSRRSSATILQLLQGIRAGILASESENSEGDRDGERDRDRDRDRERVILINPFNQNIIVQGSYDSNNDENQNQNPVGSFGDYFIGPGLDLLLQHLADNDPNRYGTLPAQKEAVEALPTVIIKEPLQCSVCLDDFEIGSKAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKLDSERARNSSDRREFENTNSESNISHGISVEEGDSEER-SGNGRSFSFPWPFNSLF 332
[Close]
BLAST of Ca_19218 vs. TrEMBL
Match: D7MLQ1_ARALL (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495725 PE=4 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 4.060e-97
Identity = 199/374 (53.21%), Postives = 244/374 (65.24%), Query Frame = 1 
Query:    1 MDETMAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIEL--ENDYNS-------GSRDDDNGGVGHY------------DXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSDDHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRA-----DESKQDSVASRSSRNQREDEN-TVHDNAEGDNEGR----NSSGGRRFSFPWPFNGLF 1029
            M+ETMA+RYWCH CSQ+VNP+ME E+KCP CQSGF+EEM+  +G    +GI ++Q+  E DFG+DRA SLWAPILLGMMS+P         E   END N        G+ +++N  V ++            D                I QLLQGIRAG+ SE +E++D+D            VI+INP+NQ+++VQGS D N +    H ++ SLGDYF+GPGLDLLLQHLAENDPNR GTPPA KEAVEALPTVKI E LQCSVCLDDFE G+EAKE+PCKH+FH  CI+PWLELHSSCPVCRF+L +     DE+K DS     +RN  E  N  + +N      GR     S  GRRFSFPWPF+GLF
Sbjct:    1 MEETMASRYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSGNSGGGGGRGIRDVQD-SETDFGTDRALSLWAPILLGMMSSPRRRRRFRRSEFGEENDDNGDELSNADGNDNNNNSNVYYHHRARRHGGEIDLDREFESILRRRRRSSGNILQLLQGIRAGIASE-YESSDND---WDNSRERDRVIMINPYNQSLVVQGSSDQNPN----HPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPLQCSVCLDDFEKGTEAKELPCKHKFHIRCIVPWLELHSSCPVCRFELPSSADDDDETKIDSERPPRTRNVGESNNRNIVENVGNAERGRQDEARSGNGRRFSFPWPFSGLF 365
[Close]
BLAST of Ca_19218 vs. TrEMBL
Match: Q9FM98_ARATH (Putative uncharacterized protein At5g56340 OS=Arabidopsis thaliana GN=ATCRT1 PE=2 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 2.632e-96
Identity = 202/378 (53.44%), Postives = 237/378 (62.70%), Query Frame = 1 
Query:    1 MDETMAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIEL--ENDYNS--------GSRDDDN---------------GGVGHYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSDDHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRA-----DESKQDSVASRSSRNQREDEN-TVHDNAEGDNEGR----NSSGGRRFSFPWPFNGLF 1029
            M+ETMAARYWCH CSQ+VNPVME E+KCP CQSGF+EEM+   G    +GI ++Q+  E DFG+DRA SLWAPILLGMMS+P         E   END N         G+ +D N               GG    D                I QLLQGIRAG+ SE     +S D+          VI+INP+NQ+++V        DQ+  H ++ SLGDYF+GPGLDLLLQHLAENDPNR GTPPA KEAVEALPTVKI E LQCSVCLDDFE G+EAKEMPCKH+FH  CI+PWLELHSSCPVCRF+L +     DE+K DS     +RN RE  N  V +N    + GR     S  GRRFSFPWPF+GLF
Sbjct:    1 MEETMAARYWCHMCSQMVNPVMESEIKCPFCQSGFIEEMSGNGGGGGGRGIRDVQD-SETDFGTDRALSLWAPILLGMMSSPRRRRRFRRSEFGEENDDNGDDLTTNADGNGNDSNNSNNNVYRHHRARRHGGEIDLDREFESILRRRRRSSGNILQLLQGIRAGIASEY----ESSDNNWDNSRERDRVIMINPYNQSLVVPS------DQNQNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSERVLRTRNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSFPWPFSGLF 367
[Close]
BLAST of Ca_19218 vs. TrEMBL
Match: R0G7B2_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10026533mg PE=4 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 7.657e-96
Identity = 199/375 (53.07%), Postives = 237/375 (63.20%), Query Frame = 1 
Query:    1 MDETMAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEM--NSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIELENDYNSGSRDDDN------------------GGVGHYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDS--DDHVXXXXXXXXHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRA-----DESKQDSVASRSSRNQREDEN-TVHDNAEGDNEGR----NSSGGRRFSFPWPFNGLF 1029
            MDETMAARYWCH CSQ+VNP+ME E+KCP CQSGF+EEM  N   G    +GI ++Q+  E DFG+DRA SLWAPILLGMMS+P         E   D +    D+ N                  GG    D                I QLLQGIRAG+ SE +E++D+  +            VI+INP+NQ+++VQGS D  ++    H ++ SLGDYF+GPGLDLLLQHLAENDPNR GTPPA KEAVEALPTVKI E LQCSVCLDDFE G+EAKE+PCKH+FH  CI+PWLELHSSCPVCRF+L +     DE+K DS     +R  RE  N  V +N      GR     S  GRRFSFPWPF+GLF
Sbjct:    1 MDETMAARYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSGNGNGGGGGGRGIRDVQD-SETDFGTDRALSLWAPILLGMMSSPRRRRRFRRSEFGEDTDDNGGDELNNVDGNISNVYRHHRARRHGGEIDLDREFESILRRRRRSSGNILQLLQGIRAGIASE-YESSDNNWESSGERDGNINNRVIMINPYNQSVVVQGSSDRTQN----HPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPLQCSVCLDDFEKGTEAKELPCKHKFHIRCIVPWLELHSSCPVCRFELPSTADDDDETKTDSERPPRTRIVRETNNRNVVENVGNAERGREDDARSGNGRRFSFPWPFSGLF 369
[Close]
BLAST of Ca_19218 vs. DB:Swiss
Match: SIRP1_ORYSJ (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 8.485e-65
Identity = 141/349 (40.40%), Postives = 181/349 (51.86%), Query Frame = 1 
Query:    1 MDETMAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPXXXXXXXXIELENDYNSGSRDDDNGGVGHYDXXXXXXXXXXXXXXATIQQLLQGIRAGLTSESHENTDSDDHVXXXXXXXXHVILINPFNQTIIVQGS-YDSNRDQSDIHSTI---GSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDNAEGDNEGRNSSGGRR--FSFPWPFNGLF 1029
            M E    RYWCH C Q +   M  E+KCP C  GFVEEM       E++ +   Q  PE  F      S W PI                   E+   +   DD++  +G           RR R ++T++++L  I   L  +   ++                ILIN FNQ + +QGS  D +  Q D   +    G L +Y +G GL LLLQHLAE+DP+R GTPPA KEAVEALPTVKI E + CSVCLDD EVGS+AK+MPC+H+FHS+CILPWLELHSSCPVCRF+L ++E+K  +  S   R +       H+    D  G  S    R     PW  N LF
Sbjct:    1 MAEAAITRYWCHECEQAIEEAMVDEIKCPSCGGGFVEEMTD----EEIERLTNRQ--PEPGF------SQWNPI-------------------EHPGETMDSDDEDNDLGR----EFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSS---------------ILINAFNQALALQGSVLDPDEGQGDQGGSTNDDGLLEEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALPTVKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEETKDLNEPSNIGRVE-----DSHEEVRADGPGNVSESSNRPWAIVPW-LNELF 293
[Close]
BLAST of Ca_19218 vs. DB:Swiss
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.737e-45
Identity = 84/157 (53.50%), Postives = 104/157 (66.24%), Query Frame = 1 
Query:  586 SLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINE-NL-----QCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDNAEGDNEGRNSSGGR-------RFSFPWPF 1017
            ++GDYF+GPGL+ L+Q LAENDPNRYGTPPA K A+EALP V I + NL     QC+VC+DDFE G+EAK+MPCKH +H  C+LPWLELH+SCPVCR +L  D+   +       R  R  + T   N +GDN G+ S G         R S PWPF
Sbjct:  169 NIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYE-------RRVRGAQGTSGGN-DGDNSGQRSDGDNRTVERSFRISLPWPF 317
[Close]
BLAST of Ca_19218 vs. DB:Swiss
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.393e-43
Identity = 78/153 (50.98%), Postives = 103/153 (67.32%), Query Frame = 1 
Query:  583 GSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENL------QCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDNAEGDNEGRNSSGGRRFS--FPWPF 1017
            G+ GDYF GPGL+ L+Q LAENDPNRYGTPPA K A++ALPTVK+ +++      QC+VC+D+FE GS+ K+MPCKH FH  C+LPWLELH+SCPVCRF+L  D+   ++         R   +    + +G  EG+ +    RFS   PWPF
Sbjct:  160 GNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYEN---------RSQGSQGSGDGQGSVEGQQTP---RFSIQLPWPF 300
[Close]
BLAST of Ca_19218 vs. DB:Swiss
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.299e-30
Identity = 71/158 (44.94%), Postives = 94/158 (59.49%), Query Frame = 1 
Query:  568 IHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINE------NLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSV-ASRSSRNQREDENTVHDNA-EGDNEGRNSSGGRRFSFPWPF 1017
            I  T G+ GDYF GPGL+ L + L+     R G PPAP+ A++ALPT+KI +      +  C VC D+FE+GSEAK+MPC H +HS CI+PWL  H+SCPVCR +L +      S   +  +RN R   ++   N+ E  NE RN      FS  WPF
Sbjct:  130 IGITRGNTGDYFFGPGLEELFEQLSAGT-TRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNP-----FSSFWPF 281
[Close]
BLAST of Ca_19218 vs. DB:Swiss
Match: RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.245e-27
Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 1 
Query:  592 GDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINE------NLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQL 867
            GDYF GPGL+ L++ L+    +R G PPAPK +++ALPT+KI +      +  C VC D+FE+ SEAK+MPC H +HS CI+PWL  H+SCPVCR +L
Sbjct:  134 GDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
[Close]
BLAST of Ca_19218 vs. DB:Swiss
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.337e-23
Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 1 
Query:  586 SLGDYFVGPGLDLLLQHLAE-----NDPNRYGTPPAPKEAVEALPTVKINE-----NLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRAD 876
            S+ +  +G G + LL+ L++     N   R G PPA K A+E+LP V+I++        C+VC + FE G E +EMPCKH FH  CI+PWL + +SCPVCRF+L +D
Sbjct:  156 SVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSD 262
[Close]
BLAST of Ca_19218 vs. DB:Swiss
Match: RN115_MOUSE (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.239e-23
Identity = 52/126 (41.27%), Postives = 79/126 (62.70%), Query Frame = 1 
Query:  592 GDYFVG-PGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTV-----KINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQR-EDENTVHD 948
            GDY  G  GLD ++  L     N  G PPA KE + +LPTV     ++N  L+C VC +D+ V  + +++PC H FHS+CI+PWLELH +CPVCR  L  ++S + + +S +S + R  +++ +HD
Sbjct:  177 GDYAWGQTGLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQTQSSEASASNRFSNDSQLHD 301
[Close]
BLAST of Ca_19218 vs. DB:Swiss
Match: RN115_HUMAN (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 9.511e-23
Identity = 52/126 (41.27%), Postives = 78/126 (61.90%), Query Frame = 1 
Query:  592 GDYFVG-PGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINE-----NLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQR-EDENTVHD 948
            GDY  G  GLD ++  L     N  G PPA KE + +LPTV + +      L+C VC +D+ V  E +++PC H FHS+CI+PWLELH +CPVCR  L  ++S + S ++ +S + R  +++ +HD
Sbjct:  176 GDYAWGQTGLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQSTEASASNRFSNDSQLHD 300
[Close]
BLAST of Ca_19218 vs. DB:Swiss
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.303e-22
Identity = 56/145 (38.62%), Postives = 78/145 (53.79%), Query Frame = 1 
Query:  586 SLGDYFVGPGLDLLLQHLAENDPN-----RYGTPPAPKEAVEALPTVKINE-----NLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDNAEGDNEGRNSSGG 990
            S+ +  +G G + LL+ L++ + +     R G PPA K A+E+LP V+I++        C+VC + FE  +EA+EMPCKH FH  CI+PWL + +SCPVCRF+L              S   R   N   DNA G    R   GG
Sbjct:  140 SVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL-------------PSEPNRRSNNNEEDNAVGMTIWRLPGGG 271
[Close]
BLAST of Ca_19218 vs. DB:Swiss
Match: MPSR1_ARATH (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.175e-22
Identity = 56/155 (36.13%), Postives = 81/155 (52.26%), Query Frame = 1 
Query:  418 GLTSESHENTDSDDHVXXXXXXXXHVILINPFNQTIIV-QGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINE-NLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRAD 876
            G + +   N D DD        RE +IL+NPF Q +IV +GS                        G++ LL+ L E+     G PPA K +++A+P V+I+    +C +CL++++     KEMPCKHRFH  CI  WL  H SCPVCR+++  D
Sbjct:   35 GFSDQESSNGDDDD----VASSRERIILVNPFTQGMIVLEGS-----------------------SGMNPLLRSLLES--REEGRPPASKASIDAMPIVEIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160
The following BLAST results are available for this feature:
BLAST of Ca_19218 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
RING1_GOSHI1.995e-4135.03E3 ubiquitin-protein ligase RING1 OS=Gossypium hir... [more]
RNG1L_ARATH1.868e-3951.28E3 ubiquitin-protein ligase RING1-like OS=Arabidop... [more]
RN115_HUMAN3.781e-2428.62E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens... [more]
RN115_MOUSE7.883e-2241.27E3 ubiquitin-protein ligase RNF115 OS=Mus musculus... [more]
RN126_HUMAN9.637e-2037.42E3 ubiquitin-protein ligase RNF126 OS=Homo sapiens... [more]
RN126_BOVIN1.644e-1941.09E3 ubiquitin-protein ligase RNF126 OS=Bos taurus G... [more]
CIP8_ARATH2.804e-1935.15E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis th... [more]
RN126_XENTR4.783e-1937.96E3 ubiquitin-protein ligase RNF126 OS=Xenopus trop... [more]
RN126_MOUSE6.246e-1937.78E3 ubiquitin-protein ligase RNF126 OS=Mus musculus... [more]
R126B_XENLA6.246e-1937.96RING finger protein 126-B OS=Xenopus laevis GN=rnf... [more]

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BLAST of Ca_19218 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7J9L6_MEDTR1.285e-15174.52RING finger protein OS=Medicago truncatula GN=MTR_... [more]
I1MY79_SOYBN4.308e-12366.96Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M5VYQ4_PRUPE3.655e-11462.93Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9GXX2_POPTR3.664e-10657.18Predicted protein (Fragment) OS=Populus trichocarp... [more]
F6GUP5_VITVI9.977e-10454.32Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SBM6_RICCO2.717e-10154.64Zinc finger protein, putative OS=Ricinus communis ... [more]
B9GLB5_POPTR2.153e-9856.36Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7MLQ1_ARALL4.060e-9753.21Zinc finger family protein OS=Arabidopsis lyrata s... [more]
Q9FM98_ARATH2.632e-9653.44Putative uncharacterized protein At5g56340 OS=Arab... [more]
R0G7B2_9BRAS7.657e-9653.07Uncharacterized protein OS=Capsella rubella GN=CAR... [more]

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BLAST of Ca_19218 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
SIRP1_ORYSJ8.485e-6540.40E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa ... [more]
RING1_GOSHI1.737e-4553.50E3 ubiquitin-protein ligase RING1 OS=Gossypium hir... [more]
RNG1L_ARATH1.393e-4350.98E3 ubiquitin-protein ligase RING1-like OS=Arabidop... [more]
RHC1A_ARATH1.299e-3044.94Probable E3 ubiquitin-protein ligase RHC1A OS=Arab... [more]
RZF1_ARATH2.245e-2753.06E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis th... [more]
RDUF1_ARATH3.337e-2344.86E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis t... [more]
RN115_MOUSE7.239e-2341.27E3 ubiquitin-protein ligase RNF115 OS=Mus musculus... [more]
RN115_HUMAN9.511e-2341.27E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens... [more]
RDUF2_ARATH1.303e-2238.62E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis t... [more]
MPSR1_ARATH5.175e-2236.13E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis t... [more]
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Expression

Available Analyses

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184Ring fingercoord: 245..285
score: 6.8
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 245..286
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10no descriptioncoord: 240..296
score: 4.3
NoneNo IPR availablePANTHERPTHR22763FAMILY NOT NAMEDcoord: 1..360
score: 3.9
NoneNo IPR availablePFAMPF13639zf-RING_2coord: 244..286
score: 8.6
NoneNo IPR availablePFAMPF14369zf-RING_3coord: 8..39
score: 2.9
NoneNo IPR availableSEGsegsegcoord: 83..90
score: NAcoord: 114..127
score: NAcoord: 156..163
score: NAcoord: 344..355
score
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 228..292
score: 2.6
NoneNo IPR availableSEGsegsegcoord: 107..114
score
NoneNo IPR availableSEGsegsegcoord: 19..30
score
NoneNo IPR availableSEGsegsegcoord: 10..23
score
NoneNo IPR availableSEGsegsegcoord: 11..18
score: NAcoord: 31..47
score
NoneNo IPR availableSEGsegsegcoord: 42..56
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_19218_v1.0_kabuli ID=Ca_19218_v1.0_kabuli; Name=Ca_19218; organism=Cicer arietinum; type=mRNA; length=1104bp
ATGGACGAAACAATGGCAGCAAGATATTGGTGTCACGCGTGTTCTCAAAT
AGTCAATCCTGTCATGGAAGTGGAGATGAAATGCCCAGTTTGCCAAAGTG
GATTTGTTGAAGAAATGAACAGTGCTGCTGGTATCAGCGAGATGCAAGGT
ATCGGCGAGATGCAAAATATACCAGAAAATGATTTTGGTTCGGATCGTGC
TGCCTCCCTTTGGGCACCAATCTTGCTAGGCATGATGAGTAATCCGCGAC
ATCGTCGAAGATTGAGACGAATAGAGCTTGAAAATGACTATAATAGTGGT
AGTCGTGATGATGATAATGGTGGTGTAGGCCATTATGATCGAGAGCTCGA
GTCTATCCTTCGGAGGAGGAGAAGAAGCTCAGCTACCATTCAGCAACTGC
TCCAAGGCATAAGAGCTGGACTGACATCTGAATCACATGAGAATACAGAC
AGTGATGACCATGTTAGAGAAAGAGAAAGAGAAAGAGAGCATGTAATTTT
GATCAATCCTTTTAATCAGACTATTATAGTTCAAGGTTCATATGATTCTA
ACCGGGATCAAAGTGATATTCATAGCACCATTGGTTCTCTGGGTGACTAT
TTCGTAGGGCCTGGTTTGGATCTATTGTTACAACATTTGGCTGAGAACGA
CCCCAATAGGTACGGAACTCCACCCGCCCCGAAGGAAGCTGTTGAAGCTC
TACCCACTGTGAAGATCAATGAGAATTTGCAGTGTTCTGTCTGTTTGGAT
GATTTTGAAGTTGGTTCTGAAGCTAAAGAGATGCCATGTAAACATAGGTT
TCATAGTGCATGCATCCTGCCCTGGCTTGAGCTTCATAGTTCTTGTCCAG
TTTGCAGGTTTCAATTGCGAGCAGATGAATCTAAGCAAGACTCCGTTGCG
TCAAGGAGTAGCAGAAATCAAAGGGAGGATGAAAATACTGTGCATGACAA
TGCTGAAGGAGACAATGAAGGGAGAAATTCAAGTGGGGGTAGAAGATTCT
CATTTCCTTGGCCTTTCAATGGATTATTTTCATCATCATCATCGTCATCA
TCATCTTCTAGTTCAAATGCAAATGGAAATGGTACTCAATCAGAAAGAAG
CTGA
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protein sequence of Ca_19218_v1.0_kabuli

>Ca_19218_v1.0_kabuli ID=Ca_19218_v1.0_kabuli; Name=Ca_19218_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=367bp
MDETMAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQG
IGEMQNIPENDFGSDRAASLWAPILLGMMSNPRHRRRLRRIELENDYNSG
SRDDDNGGVGHYDRELESILRRRRRSSATIQQLLQGIRAGLTSESHENTD
SDDHVREREREREHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDY
FVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLD
DFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVA
SRSSRNQREDENTVHDNAEGDNEGRNSSGGRRFSFPWPFNGLFSSSSSSS
SSSSSNANGNGTQSERS
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mRNA from alignment at Ca5:41634302..41635405-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_19218_v1.0_kabuli ID=Ca_19218_v1.0_kabuli; Name=Ca_19218; organism=Cicer arietinum; type=mRNA; length=1104bp; location=Sequence derived from: Ca5:41634302..41635405- (Cicer arietinum
ATGGACGAAACAATGGCAGCAAGATATTGGTGTCACGCGTGTTCTCAAAT
AGTCAATCCTGTCATGGAAGTGGAGATGAAATGCCCAGTTTGCCAAAGTG
GATTTGTTGAAGAAATGAACAGTGCTGCTGGTATCAGCGAGATGCAAGGT
ATCGGCGAGATGCAAAATATACCAGAAAATGATTTTGGTTCGGATCGTGC
TGCCTCCCTTTGGGCACCAATCTTGCTAGGCATGATGAGTAATCCGCGAC
ATCGTCGAAGATTGAGACGAATAGAGCTTGAAAATGACTATAATAGTGGT
AGTCGTGATGATGATAATGGTGGTGTAGGCCATTATGATCGAGAGCTCGA
GTCTATCCTTCGGAGGAGGAGAAGAAGCTCAGCTACCATTCAGCAACTGC
TCCAAGGCATAAGAGCTGGACTGACATCTGAATCACATGAGAATACAGAC
AGTGATGACCATGTTAGAGAAAGAGAAAGAGAAAGAGAGCATGTAATTTT
GATCAATCCTTTTAATCAGACTATTATAGTTCAAGGTTCATATGATTCTA
ACCGGGATCAAAGTGATATTCATAGCACCATTGGTTCTCTGGGTGACTAT
TTCGTAGGGCCTGGTTTGGATCTATTGTTACAACATTTGGCTGAGAACGA
CCCCAATAGGTACGGAACTCCACCCGCCCCGAAGGAAGCTGTTGAAGCTC
TACCCACTGTGAAGATCAATGAGAATTTGCAGTGTTCTGTCTGTTTGGAT
GATTTTGAAGTTGGTTCTGAAGCTAAAGAGATGCCATGTAAACATAGGTT
TCATAGTGCATGCATCCTGCCCTGGCTTGAGCTTCATAGTTCTTGTCCAG
TTTGCAGGTTTCAATTGCGAGCAGATGAATCTAAGCAAGACTCCGTTGCG
TCAAGGAGTAGCAGAAATCAAAGGGAGGATGAAAATACTGTGCATGACAA
TGCTGAAGGAGACAATGAAGGGAGAAATTCAAGTGGGGGTAGAAGATTCT
CATTTCCTTGGCCTTTCAATGGATTATTTTCATCATCATCATCGTCATCA
TCATCTTCTAGTTCAAATGCAAATGGAAATGGTACTCAATCAGAAAGAAG
CTGA
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Coding sequence (CDS) from alignment at Ca5:41634302..41635405-

>Ca_19218_v1.0_kabuli ID=Ca_19218_v1.0_kabuli; Name=Ca_19218; organism=Cicer arietinum; type=CDS; length=1104bp; location=Sequence derived from: Ca5:41634302..41635405- (Cicer arietinum
ATGGACGAAACAATGGCAGCAAGATATTGGTGTCACGCGTGTTCTCAAAT
AGTCAATCCTGTCATGGAAGTGGAGATGAAATGCCCAGTTTGCCAAAGTG
GATTTGTTGAAGAAATGAACAGTGCTGCTGGTATCAGCGAGATGCAAGGT
ATCGGCGAGATGCAAAATATACCAGAAAATGATTTTGGTTCGGATCGTGC
TGCCTCCCTTTGGGCACCAATCTTGCTAGGCATGATGAGTAATCCGCGAC
ATCGTCGAAGATTGAGACGAATAGAGCTTGAAAATGACTATAATAGTGGT
AGTCGTGATGATGATAATGGTGGTGTAGGCCATTATGATCGAGAGCTCGA
GTCTATCCTTCGGAGGAGGAGAAGAAGCTCAGCTACCATTCAGCAACTGC
TCCAAGGCATAAGAGCTGGACTGACATCTGAATCACATGAGAATACAGAC
AGTGATGACCATGTTAGAGAAAGAGAAAGAGAAAGAGAGCATGTAATTTT
GATCAATCCTTTTAATCAGACTATTATAGTTCAAGGTTCATATGATTCTA
ACCGGGATCAAAGTGATATTCATAGCACCATTGGTTCTCTGGGTGACTAT
TTCGTAGGGCCTGGTTTGGATCTATTGTTACAACATTTGGCTGAGAACGA
CCCCAATAGGTACGGAACTCCACCCGCCCCGAAGGAAGCTGTTGAAGCTC
TACCCACTGTGAAGATCAATGAGAATTTGCAGTGTTCTGTCTGTTTGGAT
GATTTTGAAGTTGGTTCTGAAGCTAAAGAGATGCCATGTAAACATAGGTT
TCATAGTGCATGCATCCTGCCCTGGCTTGAGCTTCATAGTTCTTGTCCAG
TTTGCAGGTTTCAATTGCGAGCAGATGAATCTAAGCAAGACTCCGTTGCG
TCAAGGAGTAGCAGAAATCAAAGGGAGGATGAAAATACTGTGCATGACAA
TGCTGAAGGAGACAATGAAGGGAGAAATTCAAGTGGGGGTAGAAGATTCT
CATTTCCTTGGCCTTTCAATGGATTATTTTCATCATCATCATCGTCATCA
TCATCTTCTAGTTCAAATGCAAATGGAAATGGTACTCAATCAGAAAGAAG
CTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K11982RNF115_126; E3 ubiquitin-protein ligase RNF115/126 [EC:6.3.2.19]
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding