Ca_17612, Ca_17612_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_17612 vs. TrEMBL
Match: G7LAU0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_8g027100 PE=4 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 9.048e-87 Identity = 177/257 (68.87%), Postives = 195/257 (75.88%), Query Frame = 1
Query: 31 IFNWMHKRFHHNNNLKDGFSSNMKKNETLINNIANHQALLKQVALTDMLGGWKDGILTIGTLGYDSLK--------------EHYDMVHDDADDVENFYNAEQEELNPLINNTF-EHNFEDVVCENHD---DDANKEEEITIRTFKEIVVVTPLICNEIMEEANDVEADQKKRITLADLFLADSDVKIKLHYPAPKVLLEPCEKPNIKSKHGFSFAKKIIPLVKDNARPXXXXXXXXXXXXXXXXHPDLDVKNHKAE 747
IFNW+HKRFH NN L DGF+SNMKKNE INN N QALLKQVALTDMLG WKDGILTIGTLGYD LK + +D+V DD DDVENFY+ EQEELNPLINNTF E+NFE V+CENHD DDA KEEE+ IR FKEIV V P+IC+EIME ANDVEADQKKRITLADLFLADSDVK KL Y A KVL+E EKP +K+K+GFSFAKKIIPLVK+NARP HPD+D+KNHKAE
Sbjct: 3 IFNWVHKRFHPNNTLNDGFASNMKKNEPSINNTDN-QALLKQVALTDMLGDWKDGILTIGTLGYDPLKSMNNHKEYFALEAEKQHDIVVDD-DDVENFYDVEQEELNPLINNTFDENNFEVVICENHDVVDDDARKEEEMIIRNFKEIVEVPPMICHEIME-ANDVEADQKKRITLADLFLADSDVKTKLDYSAAKVLVESSEKPKLKAKNGFSFAKKIIPLVKENARPMKDIKKLMKKMLKRKIHPDIDLKNHKAE 256
BLAST of Ca_17612 vs. TrEMBL
Match: K7KZS3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 1.451e-68 Identity = 158/292 (54.11%), Postives = 185/292 (63.36%), Query Frame = 1
Query: 31 IFNWMHKRFHHNNNLKDGFSSNMKKNETLINNIANHQALLKQVALTDMLGGWKDGILTIGTLGYDSLK--------------------EHYDMVHDDADDVENFYNAEQEELNPLINNTFEHNFEDVVCENHDDDANKEEEITIRTF-KEIVVVTPLICNEIMEEANDVEADQKK----RITLADLFLADSDVKIKLHYPAPKVLLEPCEKPNIKSKHGFSFAKKIIPLVKDNARPXXXXXXXXXXXXXXXXHPDLDVKNHKAEGQXXXXXXXXXXXXXXXXASDSSYFLPI 831
IFNW+HKRFHH+N LKDGF+SNMKK E INN A+ QALLKQVALT+ LGGW+DGILTIGTLGYD LK E +++ DD ++ + YNAE EELNPLI N+FEHNFE+VV EN+ DD + + +F EIVV P+I E++ EANDVEAD+KK RITLADLFLAD+DVKIKL PA L EKPN+K+KHG SFAKK+IP VKDN P HPDLDVKNHK E Q + SSYFLPI
Sbjct: 3 IFNWVHKRFHHHNALKDGFASNMKKTEPTINN-ADSQALLKQVALTESLGGWEDGILTIGTLGYDPLKNINPHKEYFALEIEVEQEDGEGENIMVDDHEEEQKGYNAEHEELNPLIYNSFEHNFENVVSENNHDDGD-----VVGSFNNEIVVAPPVISYEVV-EANDVEADEKKKKGERITLADLFLADTDVKIKLD-PAKVCHLASSEKPNLKAKHGLSFAKKLIPRVKDNPHPMKDIKKLMKKMLKRKIHPDLDVKNHKPESQ-EVSVAGVNNDNHMNEGNGSSYFLPI 285
BLAST of Ca_17612 vs. TrEMBL
Match: I1MKF7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 5.515e-68 Identity = 157/294 (53.40%), Postives = 186/294 (63.27%), Query Frame = 1
Query: 31 IFNWMHKRFHHNNNLKDGFSSNMKKNETLINNIANHQALLKQVALTDMLGGWKDGILTIGTLGYDSLK------EHY---------------DMVHDDADDVENFYNAEQEELNPLINNTFEHNFE-DVVCENHDDDANKEEEITIRTFK-EIVVVTPLICNEIMEEANDVEADQKK----RITLADLFLADSDVKIKLHYPAPKVLLEPCEKPNIKSKHGFSFAKKIIPLVKDNARPXXXXXXXXXXXXXXXXHPDLDVKNHKAEGQXXXXXXXXXXXXXXXXASDSSYFLPI 831
IFNW+HKRFHH+N LKDGF++NMKK E INN + QALLKQVALT+ LGGW+DGILTIGTLGYD LK E++ +++ DD + E YNA EELNPLI N+FEHNFE DVV EN+ DD ++ +R+F EIVV P+I E+ME +NDV+AD+KK RITLADLFLAD+DVKIKL A L EKPN+K+KHG SFAKK+IP VKDN P HPDLDVKNHK EGQ + SSYFLPI
Sbjct: 3 IFNWVHKRFHHHNTLKDGFATNMKKTEPTINN-TDSQALLKQVALTESLGGWEDGILTIGTLGYDPLKSINPHKEYFALEIEVEQEDGEGENNIMVDDHQEEEKGYNAAHEELNPLIYNSFEHNFEVDVVSENNHDDG----DVVVRSFNDEIVVAPPVISYEVME-SNDVDADEKKKKGERITLADLFLADTDVKIKLDPYAKVCHLASSEKPNLKAKHGLSFAKKLIPRVKDNPHPMKDIKKLMKKMLKRKIHPDLDVKNHKPEGQ-EVSAAGLNIDNHMNEGNGSSYFLPI 289
BLAST of Ca_17612 vs. TrEMBL
Match: B7FHH6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 5.905e-62 Identity = 137/202 (67.82%), Postives = 153/202 (75.74%), Query Frame = 1
Query: 97 MKKNETLINNIANHQALLKQVALTDMLGGWKDGILTIGTLGYDSLK--------------EHYDMVHDDADDVENFYNAEQEELNPLINNTF-EHNFEDVVCENHD---DDANKEEEITIRTFKEIVVVTPLICNEIMEEANDVEADQKKRITLADLFLADSDVKIKLHYPAPKVLLEPCEKPNIKSKHGFSFAKKIIPLVK 648
MKKNE INN N QALLKQVALTDMLG WKDGILTIGTLGYD LK + +D+V DD DDVENFY+ EQEELNPLINNTF E+NFE V+CENHD DDA KEEE+ IR FKEIV V P+IC+EIME ANDVEADQKKRITLADLFLADSDVK KL Y A KVL+E EKPN+K K F +++ PL++
Sbjct: 1 MKKNEPSINNTDN-QALLKQVALTDMLGDWKDGILTIGTLGYDPLKSMNNHKEYFALEAEKQHDIVVDD-DDVENFYDVEQEELNPLINNTFDENNFEVVICENHDVVDDDARKEEEMIIRNFKEIVEVPPMICHEIME-ANDVEADQKKRITLADLFLADSDVKTKLDYSAAKVLVESSEKPNLKQKMDFLLLRRLFPLLR 199
BLAST of Ca_17612 vs. TrEMBL
Match: K7MER7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.139e-55 Identity = 140/272 (51.47%), Postives = 165/272 (60.66%), Query Frame = 1
Query: 97 MKKNETLINNIANHQALLKQVALTDMLGGWKDGILTIGTLGYDSLK------EHY---------------DMVHDDADDVENFYNAEQEELNPLINNTFEHNFE-DVVCENHDDDANKEEEITIRTFK-EIVVVTPLICNEIMEEANDVEADQKK----RITLADLFLADSDVKIKLHYPAPKVLLEPCEKPNIKSKHGFSFAKKIIPLVKDNARPXXXXXXXXXXXXXXXXHPDLDVKNHKAEGQXXXXXXXXXXXXXXXXASDSSYFLPI 831
MKK E INN + QALLKQVALT+ LGGW+DGILTIGTLGYD LK E++ +++ DD + E YNA EELNPLI N+FEHNFE DVV EN+ DD ++ +R+F EIVV P+I E+ME +NDV+AD+KK RITLADLFLAD+DVKIKL A L EKPN+K+KHG SFAKK+IP VKDN P HPDLDVKNHK EGQ + SSYFLPI
Sbjct: 1 MKKTEPTINN-TDSQALLKQVALTESLGGWEDGILTIGTLGYDPLKSINPHKEYFALEIEVEQEDGEGENNIMVDDHQEEEKGYNAAHEELNPLIYNSFEHNFEVDVVSENNHDDG----DVVVRSFNDEIVVAPPVISYEVME-SNDVDADEKKKKGERITLADLFLADTDVKIKLDPYAKVCHLASSEKPNLKAKHGLSFAKKLIPRVKDNPHPMKDIKKLMKKMLKRKIHPDLDVKNHKPEGQ-EVSAAGLNIDNHMNEGNGSSYFLPI 265
BLAST of Ca_17612 vs. TrEMBL
Match: B9GR49_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_755432 PE=4 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.734e-29 Identity = 97/272 (35.66%), Postives = 139/272 (51.10%), Query Frame = 1
Query: 31 IFNWMHKRFHHNNNLKDGFSSNMKKNETLINNIANHQALLKQVALTDMLGGWKDGILTIGTLGYDSL------KEHYDMVHDDADDVE--------------------NFY---NAEQEELNPLINNTFEHNFEDVVCENHDDDANKEEEITIRTFKEIVVVTPLICNEIMEEANDVEADQKKRITLADLFLADSDVKIKLHYPAPKVLLEP-CEKPNIKSKHGFSFAKKII-PLVKDNARPXXXXXXXXXXXXXXXXHPDLDVKNHKAEGQ 753
IFNW+ +RFHH +KDG + N+KK E++ A+ QALLKQVAL D+L GWKDGILTIGTLG D L + Y ++ D + E ++Y N E EE+NPLI TF+H+FE++ ++ D +I N ++ ++ +RITLA+LFL DSD+K K + +V EP +KP ++K SFAKK+I P V +++RP HP+ D K +K E +
Sbjct: 92 IFNWVQRRFHHGT-IKDGLAGNVKKAESITKE-ADKQALLKQVALVDVLDGWKDGILTIGTLGLDPLIPFNQQNDQYFILESDEEGQEEEEDEGKEEEREIEQYSVDDDYYYDDNVEDEEVNPLIYATFDHSFEEIGSDSLHYD--------------------VITNSTTIAEHEQRKNKGERITLAELFLEDSDMKRK--PDSVEVETEPGNKKPVARAKSSISFAKKLIRPHVVEDSRPIKKFNQLMRRMLKRKIHPEFDWKGNKTESK 339
BLAST of Ca_17612 vs. TrEMBL
Match: B9I920_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_774540 PE=4 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.124e-28 Identity = 96/265 (36.23%), Postives = 136/265 (51.32%), Query Frame = 1
Query: 31 IFNWMHKRFHHNNNLKDGFSSNMKKNETLINNIANHQALLKQVALTDMLGGWKDGILTIGTLGYDSLK-------EHYDMVHDDADDVENFY-------------NAEQEELNPLINNTFEHNFEDVVCENHDDDANKEEEITIRTFKEIVVVTPLICNEIMEEANDVEADQKKRITLADLFLADSDVKIKLHYPAPKVLLEP---CEKPNIKSKHGFSFAKKII-PLVKDNARPXXXXXXXXXXXXXXXXHPDLDVKNHKAEGQ 753
IFNW+ +RFHH +KDG + N+KK E++ N A+ QALLKQVAL D+L GWKDGILTIGTLG D LK +++ + ++ ++VE N E EE++PLI TFEH+FE T V + + I E+ + + +RITLA+LFL D+D+K K V +E +KP ++K G SFAKK+I P +++RP HP+ D K +K + Q
Sbjct: 3 IFNWVQRRFHHGA-IKDGLARNVKKAESITNE-ADKQALLKQVALVDVLDGWKDGILTIGTLGLDPLKPFNQQNDQYFILESEEEEEVEREQEQYSVDDDYFDDDNVEDEEVSPLIYATFEHSFEG-------------------TGSNTVTCDVITTSSITEQ--EQRKRKGERITLAELFLEDADMKKK----PDSVEIETKSGNKKPVARAKGGLSFAKKLIRPRPGEDSRPIKKFNQLMRRMLKRKIHPEFDGKGNKTDNQ 240
BLAST of Ca_17612 vs. TrEMBL
Match: A5BGU5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008153 PE=4 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.344e-26 Identity = 101/299 (33.78%), Postives = 142/299 (47.49%), Query Frame = 1
Query: 31 IFNWMHKRFHHNNN---------------------------------------LKDGFSSNMKKNETLINNIANHQALLKQVALTDMLGGWKDGILTIGTLGYDSLKEHYDMVHDDA-DDVENFYNAEQEELNPLINNTFEHNFEDVVCENHDDDANKEEEITIRTF-----KEIVVVT----PL-----ICNEIMEEANDVEADQKK----RITLADLFLADSDVKIKLHYPAPKVLLEPCEKPNIKSKHGFSFAKKIIPLVKDNARPXXXXXXXXXXXXXXXXHPDLDVKNHKAEGQ 753
IFNW+H+RF+HN + L+DG ++N+KK E++ N+ + QALLK VAL DML GWKDGIL IGTLG+D + + A D E + E+EE+ L N E ED ++D + + F K I ++T PL +E+ E+ E DQ+K R TLADLF ADS+V+ K+ KV + +KP +SK+G SFAKK+IP V +++RP HP+L+ K K E Q
Sbjct: 3 IFNWVHRRFNHNVHSTPISLQKGLFPDPPTFFYVKLHIFLTEIEFFGGFVLWVLEDGLAANLKKVESITND-TDTQALLKHVALVDMLDGWKDGILAIGTLGFDDPLYSFSSEKECAMTDEEEGEDEEEEEVYSLNNENGEVEDED------EEDETEVNPLVFSAFGDNVPKPIPIMTVDGVPLSRFVGSSHEVGIESFTTENDQRKSKGERTTLADLFSADSEVRAKVDPEGLKV--DSGKKPAXRSKNGLSFAKKLIPRVGEDSRPIKKLHQLMTRMLKRKIHPELEGKIQKPEDQ 292
BLAST of Ca_17612 vs. TrEMBL
Match: B9T513_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0144380 PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.591e-25 Identity = 93/259 (35.91%), Postives = 128/259 (49.42%), Query Frame = 1
Query: 79 DGFSSNMKKNETLINNIANHQALLKQVALTDMLGGWKDGILTIGTLGYDSLK--------------------------------EHYDMVHDDADDVENFYNAEQEELNPLINNTFEHNFEDVVCENHDDDANKEEEITIRTFKEIVVVTPLICNEIMEEANDVEADQK-KRITLADLFLADSDVKIKLHYPAP-KVLLEPCEKPNIKSKHGFSFAKKIIPLVKDNARPXXXXXXXXXXXXXXXXHPDLDVKNHKAEGQ 753
DG + N+KK E++ N A+ QALLKQVAL D+L GW+DGILTIGTLG D LK EH DD ++ +++EE NPLI FEHN ED+ DAN + I T + I + + D++ +K +RITLA+LFLADSD+K K P P + L+ KP ++ K+ SFAKK+I V +++RP HP+L+ K K + Q
Sbjct: 11 DGLARNVKKAESITNE-ADKQALLKQVALVDVLDGWRDGILTIGTLGLDPLKPFNQQNEYFVLESEGEEDSEEEDDDDYNDNEEEHVQYSISSDDDDDDINASDEEEENPLIFTRFEHNSEDI---GPALDANAIKSNMIMTI-----------DSIEDSSCDLQRKRKGERITLAELFLADSDMKKK---PDPVENELKSGRKPPVRGKNSLSFAKKLISHVGEDSRPIKKFNQLMRRMLKRKIHPELEGKGVKTDYQ 251
BLAST of Ca_17612 vs. TrEMBL
Match: M5X706_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010082mg PE=4 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.168e-23 Identity = 83/196 (42.35%), Postives = 109/196 (55.61%), Query Frame = 1
Query: 31 IFNWMHKRFHHNNNLKDGFSSNMKKNETLINNIANHQALLKQVALT--DMLGGWKDGILTIGTLGYDSLK------------------EHYDMVH----DDADDVENF-YNAEQEELNPLINNTFEHNFEDVVCENHDDDANKEEEITIRTFKEIVVVTPL-----ICNEIMEEANDVEADQK-KRITLADLFLAD 525
IFNW+HKR H +KDGF+ N+KK+E L N + QA LKQV L D L GW+DGILTIGT G+D LK E + H DD DD E++ ++ E EELNPL+ TFEH+FED + N D K ++ + + V +TP I + + AND ++K +RITLADLF AD
Sbjct: 3 IFNWVHKRLHQRV-VKDGFAGNVKKSE-LETNDKDTQAFLKQVGLVNVDGLDGWRDGILTIGTFGFDPLKPSTHQNEYFVLESEEDDQESHGFSHSGNDDDDDDDEHYDHSVEDEELNPLMFTTFEHSFED-IGSNFDAIVQKPADVILTV--DGVPLTPFEGSSEISTKPDQSANDQSKNKKGQRITLADLFQAD 193 The following BLAST results are available for this feature:
BLAST of Ca_17612 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 24
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BLAST of Ca_17612 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_17612_v1.0_kabuli ID=Ca_17612_v1.0_kabuli; Name=Ca_17612; organism=Cicer arietinum; type=mRNA; length=834bpback to top protein sequence of Ca_17612_v1.0_kabuli >Ca_17612_v1.0_kabuli ID=Ca_17612_v1.0_kabuli; Name=Ca_17612_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=277bpback to top mRNA from alignment at Ca7:34762793..34775449- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_17612_v1.0_kabuli ID=Ca_17612_v1.0_kabuli; Name=Ca_17612; organism=Cicer arietinum; type=mRNA; length=12657bp; location=Sequence derived from: Ca7:34762793..34775449- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca7:34762793..34775449- >Ca_17612_v1.0_kabuli ID=Ca_17612_v1.0_kabuli; Name=Ca_17612; organism=Cicer arietinum; type=CDS; length=834bp; location=Sequence derived from: Ca7:34762793..34775449- (Cicer arietinumback to top |