Ca_24410, Ca_24410_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_24410
Unique NameCa_24410_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length447
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca7chromosomeCa7:526395..526841 +Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
InterProScan analysis for kabuli C. arietinum unigenes2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_24410-CDS1Ca_24410-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_24410_v1.0_kabuliCa_24410_v1.0_kabuliCicer arietinumpolypeptide


Homology
The following BLAST results are available for this feature:
BLAST of Ca_24410 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 27..41
score
NoneNo IPR availableSEGsegsegcoord: 6..29
score: NAcoord: 47..60
score
NoneNo IPR availableSEGsegsegcoord: 37..51
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_24410_v1.0_kabuli ID=Ca_24410_v1.0_kabuli; Name=Ca_24410; organism=Cicer arietinum; type=mRNA; length=447bp
ATGGAAGATGGTGAGGAGTTATATTTTAATCTCAATTTATCTTATCCTCC
CTCTCCTATGGATGTGCTTATGGCTTCTCCTCCAACTGTTCCAGTGGATG
AAGATGTGCTCCCACCACCAGATTTTTCGCAACAAATTCCTTTTGCTGCA
AACTTTGAAAAACCTGCCCAACCTCTCCCTAAGGTCACAGGTGTGTTCAG
TTCCCTTGACTCCTTTTTTATTGCCACGACTCATAACCATTCAAAGGACA
AGGCTCAGAGCTCTCAGAATAAGAGTTCTAGTGTAAATGATCAGCCTAAG
GGTTCGGTTCCTAGCACAAGGATTCAGGACAGCAAGAATCAGAAGCAGAT
GAAACTTCTCAAATTAATTAGGAAAGACCAGAAGAAAATCCTTCAGCGCT
TCACTCACTTTCAGAACTCTTTGGTTCAATTTGGTCTCATTCTTTAA
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protein sequence of Ca_24410_v1.0_kabuli

>Ca_24410_v1.0_kabuli ID=Ca_24410_v1.0_kabuli; Name=Ca_24410_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=148bp
MEDGEELYFNLNLSYPPSPMDVLMASPPTVPVDEDVLPPPDFSQQIPFAA
NFEKPAQPLPKVTGVFSSLDSFFIATTHNHSKDKAQSSQNKSSSVNDQPK
GSVPSTRIQDSKNQKQMKLLKLIRKDQKKILQRFTHFQNSLVQFGLIL
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mRNA from alignment at Ca7:526395..526841+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_24410_v1.0_kabuli ID=Ca_24410_v1.0_kabuli; Name=Ca_24410; organism=Cicer arietinum; type=mRNA; length=447bp; location=Sequence derived from: Ca7:526395..526841+ (Cicer arietinum
ATGGAAGATGGTGAGGAGTTATATTTTAATCTCAATTTATCTTATCCTCC
CTCTCCTATGGATGTGCTTATGGCTTCTCCTCCAACTGTTCCAGTGGATG
AAGATGTGCTCCCACCACCAGATTTTTCGCAACAAATTCCTTTTGCTGCA
AACTTTGAAAAACCTGCCCAACCTCTCCCTAAGGTCACAGGTGTGTTCAG
TTCCCTTGACTCCTTTTTTATTGCCACGACTCATAACCATTCAAAGGACA
AGGCTCAGAGCTCTCAGAATAAGAGTTCTAGTGTAAATGATCAGCCTAAG
GGTTCGGTTCCTAGCACAAGGATTCAGGACAGCAAGAATCAGAAGCAGAT
GAAACTTCTCAAATTAATTAGGAAAGACCAGAAGAAAATCCTTCAGCGCT
TCACTCACTTTCAGAACTCTTTGGTTCAATTTGGTCTCATTCTTTAA
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Coding sequence (CDS) from alignment at Ca7:526395..526841+

>Ca_24410_v1.0_kabuli ID=Ca_24410_v1.0_kabuli; Name=Ca_24410; organism=Cicer arietinum; type=CDS; length=447bp; location=Sequence derived from: Ca7:526395..526841+ (Cicer arietinum
ATGGAAGATGGTGAGGAGTTATATTTTAATCTCAATTTATCTTATCCTCC
CTCTCCTATGGATGTGCTTATGGCTTCTCCTCCAACTGTTCCAGTGGATG
AAGATGTGCTCCCACCACCAGATTTTTCGCAACAAATTCCTTTTGCTGCA
AACTTTGAAAAACCTGCCCAACCTCTCCCTAAGGTCACAGGTGTGTTCAG
TTCCCTTGACTCCTTTTTTATTGCCACGACTCATAACCATTCAAAGGACA
AGGCTCAGAGCTCTCAGAATAAGAGTTCTAGTGTAAATGATCAGCCTAAG
GGTTCGGTTCCTAGCACAAGGATTCAGGACAGCAAGAATCAGAAGCAGAT
GAAACTTCTCAAATTAATTAGGAAAGACCAGAAGAAAATCCTTCAGCGCT
TCACTCACTTTCAGAACTCTTTGGTTCAATTTGGTCTCATTCTTTAA
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