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Transcript Overview
| Name | PHYA |
|---|
| Unique Name | AY688953.1-PHYA.m1 |
|---|
| Type | mRNA |
|---|
| Organism | Pisum sativum (pea) |
|---|
| Source | genbank |
|---|
| Product | phytochrome A apoprotein |
|---|
| Genbank Note | photoreceptor |
|---|
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| AY688953.1-PHYA.m1-cds1 | AY688953.1-PHYA.m1-cds1 | Pisum sativum | CDS |
| AY688953.1-PHYA.m1-cds2 | AY688953.1-PHYA.m1-cds2 | Pisum sativum | CDS |
| AY688953.1-PHYA.m1-cds3 | AY688953.1-PHYA.m1-cds3 | Pisum sativum | CDS |
| AY688953.1-PHYA.m1-cds4 | AY688953.1-PHYA.m1-cds4 | Pisum sativum | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| PHYA | AY688953.1-PHYA.p1 | Pisum sativum | polypeptide |
Sequences
The
following sequences are available for this feature:
mRNA sequence >AY688953.1-PHYA.m1 ID=AY688953.1-PHYA.m1; Name=PHYA; organism=Pisum sativum; type=mRNA; length=3375bp
atgtcaaccacgaggcctagccaatcgtccaacaattcggggaggtcaag
aaatagtgctaggattattgctcagacgactgtggatgcaaagcttcatg
caacttttgaggagtccggtagttcgtttgactactcgagttcggtgcgt
gtttctggctcggtggatggagatcaacaaccgaggtccaacaaagtgac
gacggcttacctcaatcatatacagagaggtaagcagatccagcctttcg
ggtgcttgctagctttagatgagaaaacgtgcaaggttgttgcgtatagt
gagaatgcgcctgagatgctgactatggtgagtcatgctgttcctagcgt
tggtgaccatcctgctcttggcattggaactgacataaggactgttttca
ctgcgccgagtgcttctgccttgcagaaggcgctagggtttgcggaggtt
tcacttcttaacccgattcttgttcattgcaagacttctgggaagccgtt
ttacgcgatcattcatcgtgttactggtagtttgatcattgactttgagc
cggtgaagccttatgaagttcccatgactgctgcgggtgccttgcaatct
tacaaacttgctgctaaagcaattacaagattgcaatctttggctagtgg
cagcatggaaaggctttgtgataccatggttcaagaagtttttgaactaa
cgggttatgacagggtgatggcttataaatttcacgaggatgatcacggg
gaggtgattgctgagatagcaaagccaggcctagagccatatctaggtct
gcactatccggcgacagatattccccaggctgcgcggtttctatttatga
agaacaaggtccgtatgatagttgattgtaatgcaaaacatgtgaaggtt
cttcaagacgaaaaactcccatttgatttgactctgtgcggttcgacctt
gagagctccacatagttgccatttgcagtacatggctaacatggattcaa
ttgcttcgttggttatggcagttgtcgtcaatgacagcgatgaagatgga
gatagcgctgacgcagttctcccacaaaagaaaaagagactttggggttt
ggtagtttgtcataacactactccaaggtttgttccttttcctctaaggt
atgcttgtgagtttctggctcaagtgtttgccatccatgtgaacaaagaa
atagagttagaatatcagattcttgagaagaatatcctgcgcacgcagac
gctgttgtgtgatatgttgatgcgagatgcacccttaggtattgtatcac
aaagccctaatataatggatctagtgaaatgtgatggggctgcactcttt
tatagaaacaagttatggttattaggagcgacaccgactgaatctcaatt
aagagagatagctttatggatgtctgagtatcatacagattcaacaggtt
tgagtacagacagcttgtcggatgcagggtttccaggggctctttctctt
agtgatactgtatgtggaatggcagctgttagaataacttcaaaagacat
agttttctggtttaggtcgcacactgctgcagaaatccgatggggtggtg
caaagcatgaaccgggcgaccaagacgatggtaggaagatgcatccaaga
tcatcattcaaggctttccttgaagttgtgaaagccagaagcgtgccgtg
gaaagactttgaaatggatgctattcattcgttgcagttaatactgagaa
atgcgtccaaagatacagatattatagatttgaatacgaaggcaatcaat
acaagactaaatgatttgaagattgaagggatgcaggaattggaagcagt
gacaagtgagatggttagattaattgaaacagcaacagtgcctattttgg
cagtggatgttgatgggacggtcaacggatggaatataaaaatcgccgag
ttgacaggtcttccggttggcgaagctattggaaaacatctactcaccct
ggttgaggattcttcaactgatatagtcaagaagatgctcaacttggcac
tgcagggtgaagaagagaagaatgttcaattcgagataaaaacacatggg
gatcaggtggaatccggtcctattagtttgatagttaacgcatgtgcaag
caaggatcttcgtgaaaatgtagtgggggtttgttttgtggcccaagata
taactgctcagaagactgtcatggacaaattcacccgaatcgaaggcgat
tacaaagcaattgtgcagaacccaaatcagttgatccctcctatattcgg
tacagatgaatttggctggtgttgtgagtggaatgcagctatgattaagt
taaccggatggaagcgcgaggaggtgatggataaaatgcttctcggagag
gttttcggaactcaaatgtcttgttgtcgtctaaagaatcaagaagcttt
tgttaatttcggcattgtacttaataaagccatgaccggtttggaaacag
aaaaggtcccttttggcttcttctctcgaaaaggcaagtatgtagagtgc
ctactctcggtgagtaagaaaatcgacgcagagggcctagttaccggagt
cttctgtttcttgcagttagctagccctgagctgcaacaagcattacata
ttcagcgcctgtccgaacaaaccgctctcaagagactgaaagtactaact
tacatgaaaaggcagatcaggaatccgttggctgggatcgtgttttccag
taaaatgctggagggtactgacttggaaaccgaacaaaagcgaatcgtga
acactagttctcagtgccaacgccagcttagcaaaattcttgacgactct
gatctcgacggcatcattgatgggtacttggatcttgagatggctgaatt
cactttacatgaggtactggttacctctcttagtcaagtcatgaatagga
gtaacacaaagggtatccgtatagccaacgatgttgcggagcatatcgcg
agggaaaccttgtatggtgatagtcttaggcttcagcaggtcctagctga
ctttttactaatttccatcaattccacacctaatggaggccaggttgtta
tagcagcctccttaactaaagaacagttgggaaaatctgtccatcttgtt
aacttggagctcagcataacacacggtggtagtggcgtgccagaagcggc
gctgaaccagatgtttggaaataatgtgctagaatctgaggagggtatta
gcctacacatcagtcggaagttgttaaagcttatgaatggagatgttcgt
tatttaaaagaagcaggaaaatcatcgtttattctatctgttgaacttgc
agcagctcataagttgaaaggttga back to topprotein sequence of PHYA >AY688953.1-PHYA.p1 ID=AY688953.1-PHYA.p1; Name=PHYA; organism=Pisum sativum; type=polypeptide; length=1124bp
MSTTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVR
VSGSVDGDQQPRSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYS
ENAPEMLTMVSHAVPSVGDHPALGIGTDIRTVFTAPSASALQKALGFAEV
SLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQS
YKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHG
EVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV
LQDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDG
DSADAVLPQKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE
IELEYQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALF
YRNKLWLLGATPTESQLREIALWMSEYHTDSTGLSTDSLSDAGFPGALSL
SDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGDQDDGRKMHPR
SSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAIN
TRLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAE
LTGLPVGEAIGKHLLTLVEDSSTDIVKKMLNLALQGEEEKNVQFEIKTHG
DQVESGPISLIVNACASKDLRENVVGVCFVAQDITAQKTVMDKFTRIEGD
YKAIVQNPNQLIPPIFGTDEFGWCCEWNAAMIKLTGWKREEVMDKMLLGE
VFGTQMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFFSRKGKYVEC
LLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLT
YMKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDS
DLDGIIDGYLDLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIA
RETLYGDSLRLQQVLADFLLISINSTPNGGQVVIAASLTKEQLGKSVHLV
NLELSITHGGSGVPEAALNQMFGNNVLESEEGISLHISRKLLKLMNGDVR
YLKEAGKSSFILSVELAAAHKLKG back to topmRNA from alignment at AY688953:1741..5411+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >AY688953.1-PHYA.m1 ID=AY688953.1-PHYA.m1; Name=PHYA; organism=Pisum sativum; type=mRNA; length=3671bp; location=Sequence derived from: AY688953:1741..5411+ (Pisum sativum
atgtcaaccacgaggcctagccaatcgtccaacaattcggggaggtcaag
aaatagtgctaggattattgctcagacgactgtggatgcaaagcttcatg
caacttttgaggagtccggtagttcgtttgactactcgagttcggtgcgt
gtttctggctcggtggatggagatcaacaaccgaggtccaacaaagtgac
gacggcttacctcaatcatatacagagaggtaagcagatccagcctttcg
ggtgcttgctagctttagatgagaaaacgtgcaaggttgttgcgtatagt
gagaatgcgcctgagatgctgactatggtgagtcatgctgttcctagcgt
tggtgaccatcctgctcttggcattggaactgacataaggactgttttca
ctgcgccgagtgcttctgccttgcagaaggcgctagggtttgcggaggtt
tcacttcttaacccgattcttgttcattgcaagacttctgggaagccgtt
ttacgcgatcattcatcgtgttactggtagtttgatcattgactttgagc
cggtgaagccttatgaagttcccatgactgctgcgggtgccttgcaatct
tacaaacttgctgctaaagcaattacaagattgcaatctttggctagtgg
cagcatggaaaggctttgtgataccatggttcaagaagtttttgaactaa
cgggttatgacagggtgatggcttataaatttcacgaggatgatcacggg
gaggtgattgctgagatagcaaagccaggcctagagccatatctaggtct
gcactatccggcgacagatattccccaggctgcgcggtttctatttatga
agaacaaggtccgtatgatagttgattgtaatgcaaaacatgtgaaggtt
cttcaagacgaaaaactcccatttgatttgactctgtgcggttcgacctt
gagagctccacatagttgccatttgcagtacatggctaacatggattcaa
ttgcttcgttggttatggcagttgtcgtcaatgacagcgatgaagatgga
gatagcgctgacgcagttctcccacaaaagaaaaagagactttggggttt
ggtagtttgtcataacactactccaaggtttgttccttttcctctaaggt
atgcttgtgagtttctggctcaagtgtttgccatccatgtgaacaaagaa
atagagttagaatatcagattcttgagaagaatatcctgcgcacgcagac
gctgttgtgtgatatgttgatgcgagatgcacccttaggtattgtatcac
aaagccctaatataatggatctagtgaaatgtgatggggctgcactcttt
tatagaaacaagttatggttattaggagcgacaccgactgaatctcaatt
aagagagatagctttatggatgtctgagtatcatacagattcaacaggtt
tgagtacagacagcttgtcggatgcagggtttccaggggctctttctctt
agtgatactgtatgtggaatggcagctgttagaataacttcaaaagacat
agttttctggtttaggtcgcacactgctgcagaaatccgatggggtggtg
caaagcatgaaccgggcgaccaagacgatggtaggaagatgcatccaaga
tcatcattcaaggctttccttgaagttgtgaaagccagaagcgtgccgtg
gaaagactttgaaatggatgctattcattcgttgcagttaatactgagaa
atgcgtccaaagatacagatattatagatttgaatacgaaggcaatcaat
acaagactaaatgatttgaagattgaagggatgcaggaattggaagcagt
gacaagtgagatggttagattaattgaaacagcaacagtgcctattttgg
cagtggatgttgatgggacggtcaacggatggaatataaaaatcgccgag
ttgacaggtcttccggttggcgaagctattggaaaacatctactcaccct
ggttgaggattcttcaactgatatagtcaagaagatgctcaacttggcac
tgcagggtatgccttttttccttttccatcttattatcctttacttaaga
ctctaactgttgattttgttctcttataatgtaatcaggtgaagaagaga
agaatgttcaattcgagataaaaacacatggggatcaggtggaatccggt
cctattagtttgatagttaacgcatgtgcaagcaaggatcttcgtgaaaa
tgtagtgggggtttgttttgtggcccaagatataactgctcagaagactg
tcatggacaaattcacccgaatcgaaggcgattacaaagcaattgtgcag
aacccaaatcagttgatccctcctatattcggtacagatgaatttggctg
gtgttgtgagtggaatgcagctatgattaagttaaccggatggaagcgcg
aggaggtgatggataaaatgcttctcggagaggttttcggaactcaaatg
tcttgttgtcgtctaaagaatcaagaagcttttgttaatttcggcattgt
acttaataaagccatgaccggtttggaaacagaaaaggtcccttttggct
tcttctctcgaaaaggcaagtatgtagagtgcctactctcggtgagtaag
aaaatcgacgcagagggcctagttaccggagtcttctgtttcttgcagtt
agctagccctgagctgcaacaagcattacatattcagcgcctgtccgaac
aaaccgctctcaagagactgaaagtactaacttacatgaaaaggcagatc
aggaatccgttggctgggatcgtgttttccagtaaaatgctggagggtac
tgacttggaaaccgaacaaaagcgaatcgtgaacactagttctcagtgcc
aacgccagcttagcaaaattcttgacgactctgatctcgacggcatcatt
gatgggtatgatatcagtaaatatattgttcttttaacatttttttttac
ccttactcacattcatgtgtgaaattttgacaggtacttggatcttgaga
tggctgaattcactttacatgaggtactggttacctctcttagtcaagtc
atgaataggagtaacacaaagggtatccgtatagccaacgatgttgcgga
gcatatcgcgagggaaaccttgtatggtgatagtcttaggcttcagcagg
tcctagctgactttttactaatttccatcaattccacacctaatggaggc
caggttgttatagcagcctccttaactaaagaacagttgggaaaatctgt
ccatcttgttaacttggagctcaggtaactgttccatattcacgcatgta
tcgattttcagtatccgatgatttaagcctcggtaataatcttagctttg
gtgaaactgctaactgcaataaactaatatctgtatatattttgtttgcg
atttgtgtagcataacacacggtggtagtggcgtgccagaagcggcgctg
aaccagatgtttggaaataatgtgctagaatctgaggagggtattagcct
acacatcagtcggaagttgttaaagcttatgaatggagatgttcgttatt
taaaagaagcaggaaaatcatcgtttattctatctgttgaacttgcagca
gctcataagttgaaaggttga back to topCoding sequence (CDS) from alignment at AY688953:1741..5411+ >AY688953.1-PHYA.m1 ID=AY688953.1-PHYA.m1; Name=PHYA; organism=Pisum sativum; type=CDS; length=3375bp; location=Sequence derived from: AY688953:1741..5411+ (Pisum sativum
atgtcaaccacgaggcctagccaatcgtccaacaattcggggaggtcaag
aaatagtgctaggattattgctcagacgactgtggatgcaaagcttcatg
caacttttgaggagtccggtagttcgtttgactactcgagttcggtgcgt
gtttctggctcggtggatggagatcaacaaccgaggtccaacaaagtgac
gacggcttacctcaatcatatacagagaggtaagcagatccagcctttcg
ggtgcttgctagctttagatgagaaaacgtgcaaggttgttgcgtatagt
gagaatgcgcctgagatgctgactatggtgagtcatgctgttcctagcgt
tggtgaccatcctgctcttggcattggaactgacataaggactgttttca
ctgcgccgagtgcttctgccttgcagaaggcgctagggtttgcggaggtt
tcacttcttaacccgattcttgttcattgcaagacttctgggaagccgtt
ttacgcgatcattcatcgtgttactggtagtttgatcattgactttgagc
cggtgaagccttatgaagttcccatgactgctgcgggtgccttgcaatct
tacaaacttgctgctaaagcaattacaagattgcaatctttggctagtgg
cagcatggaaaggctttgtgataccatggttcaagaagtttttgaactaa
cgggttatgacagggtgatggcttataaatttcacgaggatgatcacggg
gaggtgattgctgagatagcaaagccaggcctagagccatatctaggtct
gcactatccggcgacagatattccccaggctgcgcggtttctatttatga
agaacaaggtccgtatgatagttgattgtaatgcaaaacatgtgaaggtt
cttcaagacgaaaaactcccatttgatttgactctgtgcggttcgacctt
gagagctccacatagttgccatttgcagtacatggctaacatggattcaa
ttgcttcgttggttatggcagttgtcgtcaatgacagcgatgaagatgga
gatagcgctgacgcagttctcccacaaaagaaaaagagactttggggttt
ggtagtttgtcataacactactccaaggtttgttccttttcctctaaggt
atgcttgtgagtttctggctcaagtgtttgccatccatgtgaacaaagaa
atagagttagaatatcagattcttgagaagaatatcctgcgcacgcagac
gctgttgtgtgatatgttgatgcgagatgcacccttaggtattgtatcac
aaagccctaatataatggatctagtgaaatgtgatggggctgcactcttt
tatagaaacaagttatggttattaggagcgacaccgactgaatctcaatt
aagagagatagctttatggatgtctgagtatcatacagattcaacaggtt
tgagtacagacagcttgtcggatgcagggtttccaggggctctttctctt
agtgatactgtatgtggaatggcagctgttagaataacttcaaaagacat
agttttctggtttaggtcgcacactgctgcagaaatccgatggggtggtg
caaagcatgaaccgggcgaccaagacgatggtaggaagatgcatccaaga
tcatcattcaaggctttccttgaagttgtgaaagccagaagcgtgccgtg
gaaagactttgaaatggatgctattcattcgttgcagttaatactgagaa
atgcgtccaaagatacagatattatagatttgaatacgaaggcaatcaat
acaagactaaatgatttgaagattgaagggatgcaggaattggaagcagt
gacaagtgagatggttagattaattgaaacagcaacagtgcctattttgg
cagtggatgttgatgggacggtcaacggatggaatataaaaatcgccgag
ttgacaggtcttccggttggcgaagctattggaaaacatctactcaccct
ggttgaggattcttcaactgatatagtcaagaagatgctcaacttggcac
tgcagggtgaagaagagaagaatgttcaattcgagataaaaacacatggg
gatcaggtggaatccggtcctattagtttgatagttaacgcatgtgcaag
caaggatcttcgtgaaaatgtagtgggggtttgttttgtggcccaagata
taactgctcagaagactgtcatggacaaattcacccgaatcgaaggcgat
tacaaagcaattgtgcagaacccaaatcagttgatccctcctatattcgg
tacagatgaatttggctggtgttgtgagtggaatgcagctatgattaagt
taaccggatggaagcgcgaggaggtgatggataaaatgcttctcggagag
gttttcggaactcaaatgtcttgttgtcgtctaaagaatcaagaagcttt
tgttaatttcggcattgtacttaataaagccatgaccggtttggaaacag
aaaaggtcccttttggcttcttctctcgaaaaggcaagtatgtagagtgc
ctactctcggtgagtaagaaaatcgacgcagagggcctagttaccggagt
cttctgtttcttgcagttagctagccctgagctgcaacaagcattacata
ttcagcgcctgtccgaacaaaccgctctcaagagactgaaagtactaact
tacatgaaaaggcagatcaggaatccgttggctgggatcgtgttttccag
taaaatgctggagggtactgacttggaaaccgaacaaaagcgaatcgtga
acactagttctcagtgccaacgccagcttagcaaaattcttgacgactct
gatctcgacggcatcattgatgggtacttggatcttgagatggctgaatt
cactttacatgaggtactggttacctctcttagtcaagtcatgaatagga
gtaacacaaagggtatccgtatagccaacgatgttgcggagcatatcgcg
agggaaaccttgtatggtgatagtcttaggcttcagcaggtcctagctga
ctttttactaatttccatcaattccacacctaatggaggccaggttgtta
tagcagcctccttaactaaagaacagttgggaaaatctgtccatcttgtt
aacttggagctcagcataacacacggtggtagtggcgtgccagaagcggc
gctgaaccagatgtttggaaataatgtgctagaatctgaggagggtatta
gcctacacatcagtcggaagttgttaaagcttatgaatggagatgttcgt
tatttaaaagaagcaggaaaatcatcgtttattctatctgttgaacttgc
agcagctcataagttgaaaggttga back to top
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