Ca_19463.1, Ca_19463.1_ICC4958_v2 (mRNA) Cicer arietinum

Transcript Overview
NameCa_19463.1
Unique NameCa_19463.1_ICC4958_v2
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length4013
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca_LG_7supercontigCa_LG_7:7079263..7083275 +Cicer arietinum ICC 4958 genome v2n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum ICC 4958 genome v22015-08-11
InterProScan: C. arietinum ICC 4958, v2.0 (desi)2019-05-21
BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
caipsR802Pisum sativum Cameor genome v1aPisum sativum
caipvR0874Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0876Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuR0841Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivuR0843Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvR1003Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuR0970Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccR0926Cajanus cajan Asha genome v1.0Cajanus cajan
caiccR0950Cajanus cajan Asha genome v1.0Cajanus cajan
ancaiL0232Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0538Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL1422Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caizwsR809Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caizwsR881Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caizwsR897Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caivfhR862Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caitifR863Vicia faba cv. Tiffany genome v1.0Vicia faba
caitifR885Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR892Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivfhR928Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivssR0932Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivssR1013Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivssR1029Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivuaR788Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caivuaR791Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caivuaR908Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caicanR0859Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat04G0549600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-KK1_000856Cajanus cajan Asha genome v1.0Cajanus cajan
jg15769.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat4g162240.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Hedin2.R1.4g050640.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr10.1409Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.010G115700.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun10g147900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Tiffany.R1.4g039440.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_18072Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004510590.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ca_19463Ca_19463_ICC4958_v2Cicer arietinumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_19463.1_ICC4958_v2Ca_19463.1_ICC4958_v2Cicer arietinumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_19463.1.exon1Ca_19463.1.exon1_ICC4958_v2Cicer arietinumexon
Ca_19463.1.exon2Ca_19463.1.exon2_ICC4958_v2Cicer arietinumexon
Ca_19463.1.exon3Ca_19463.1.exon3_ICC4958_v2Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_19463.1.cds1Ca_19463.1.cds1_ICC4958_v2Cicer arietinumCDS
Ca_19463.1.cds2Ca_19463.1.cds2_ICC4958_v2Cicer arietinumCDS
Ca_19463.1.cds3Ca_19463.1.cds3_ICC4958_v2Cicer arietinumCDS


Homology
[Close]
BLAST of Ca_19463.1 vs. DB:Swiss
Match: ORML1_MOUSE (ORM1-like protein 1 OS=Mus musculus OX=10090 GN=Ormdl1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.614e-33
Identity = 63/148 (42.57%), Postives = 87/148 (58.78%), Query Frame = 1 
Query:   22 AVPPADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPGIAWTIVNLAHFLVTYHFFHWKKGTPFAD-DQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRIFGIN 462
             V  +++N NT      G+W TY L +    I++LS+  CS  +AWT+ N+ H L  Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKF T+ P++LY +AS  T Y+      NT ++  +++ K P +H VRIFGIN
Sbjct:    4 GVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFCSVPVAWTLTNIIHNLGMYVFLHAVKGTPFETPDQGRARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYDPTHFILNTASLLSVLIPKMPQLHGVRIFGIN 151
[Close]
BLAST of Ca_19463.1 vs. DB:Swiss
Match: ORML3_MOUSE (ORM1-like protein 3 OS=Mus musculus OX=10090 GN=Ormdl3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.126e-33
Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 1 
Query:   34 ADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPGIAWTIVNLAHFLVTYHFFHWKKGTPFAD-DQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRIFGIN 462
            +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H L  Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y+      NTV++  +++ K P +H VRIFGIN
Sbjct:    8 SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNLGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQVHFILNTVSLMTVLIPKLPQLHGVRIFGIN 151
[Close]
BLAST of Ca_19463.1 vs. DB:Swiss
Match: ORML3_RAT (ORM1-like protein 3 OS=Rattus norvegicus OX=10116 GN=Ormdl3 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 6.372e-33
Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 1 
Query:   34 ADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPGIAWTIVNLAHFLVTYHFFHWKKGTPFAD-DQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRIFGIN 462
            +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H L  Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y+      NTV++  +++ K P +H VRIFGIN
Sbjct:    8 SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNLGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQVHFILNTVSLMSVLIPKLPQLHGVRIFGIN 151
[Close]
BLAST of Ca_19463.1 vs. DB:Swiss
Match: ORML3_HUMAN (ORM1-like protein 3 OS=Homo sapiens OX=9606 GN=ORMDL3 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.219e-33
Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 1 
Query:   34 ADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPGIAWTIVNLAHFLVTYHFFHWKKGTPFAD-DQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRIFGIN 462
            +++N NT      G+W +Y+L +    I++LS+   S  + WT+ NL H +  Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y+      NTV++  +++ K P +H VRIFGIN
Sbjct:    8 SEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQIHFVLNTVSLMSVLIPKLPQLHGVRIFGIN 151
[Close]
BLAST of Ca_19463.1 vs. DB:Swiss
Match: ORML1_XENLA (ORM1-like protein 1 OS=Xenopus laevis OX=8355 GN=ormdl1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.146e-32
Identity = 64/148 (43.24%), Postives = 88/148 (59.46%), Query Frame = 1 
Query:   22 AVPPADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPGIAWTIVNLAHFLVTYHFFHWKKGTPFAD-DQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRIFGIN 462
             V  +++N NT      G+W TY L +    I++LS+   S  +AWT+ N+ H L  Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P++LY +AS  T Y+    F NT ++  +++ K P +H VRIFGIN
Sbjct:    4 GVAHSEVNPNTRVMNSRGMWLTYALGVGMLHIVLLSIPFFSVPVAWTLTNVIHNLGMYVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFLTISPIILYFLASFYTKYDPTHFFINTASLLSVLIPKLPQLHGVRIFGIN 151
[Close]
BLAST of Ca_19463.1 vs. DB:Swiss
Match: ORML3_BOVIN (ORM1-like protein 3 OS=Bos taurus OX=9913 GN=ORMDL3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.209e-32
Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1 
Query:   34 ADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPGIAWTIVNLAHFLVTYHFFHWKKGTPFAD-DQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRIFGIN 462
            +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H +  Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y+      NTV++  +++ K P +H VRIFGIN
Sbjct:    8 SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQIHFILNTVSLMSVLIPKLPQLHGVRIFGIN 151
[Close]
BLAST of Ca_19463.1 vs. DB:Swiss
Match: ORML3_PONAB (ORM1-like protein 3 OS=Pongo abelii OX=9601 GN=ORMDL3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.604e-32
Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1 
Query:   34 ADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPGIAWTIVNLAHFLVTYHFFHWKKGTPFAD-DQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRIFGIN 462
            +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H +  Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y+      NTV++  +++ K P +H VRIFGIN
Sbjct:    8 SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQIHFVLNTVSLMSVLIPKLPQLHGVRIFGIN 151
[Close]
BLAST of Ca_19463.1 vs. DB:Swiss
Match: ORML2_HUMAN (ORM1-like protein 2 OS=Homo sapiens OX=9606 GN=ORMDL2 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.788e-32
Identity = 61/148 (41.22%), Postives = 88/148 (59.46%), Query Frame = 1 
Query:   22 AVPPADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPGIAWTIVNLAHFLVTYHFFHWKKGTPFAD-DQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRIFGIN 462
             V  +++N NT      G+W  YI+++    +++LS+   S  + WT+ N+ H L TY F H  KGTPF   DQG    LT WEQ+D G Q T +RKFL++ P+VLYL+AS  T Y+      NT ++  +++ K P  H VR+FGIN
Sbjct:    4 GVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLATYVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYDAAHFLINTASLLSVLLPKLPQFHGVRVFGIN 151
[Close]
BLAST of Ca_19463.1 vs. DB:Swiss
Match: ORML3_AILME (ORM1-like protein 3 OS=Ailuropoda melanoleuca OX=9646 GN=ORMDL3 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.532e-32
Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 1 
Query:   34 ADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPGIAWTIVNLAHFLVTYHFFHWKKGTPFAD-DQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRIFGIN 462
            +++N NT      G+W +Y+L +    +++LS+   S  + WT+ NL H    Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+VLY + S  T Y+      NTV++  +++ K P +H VRIFGIN
Sbjct:    8 SEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNTGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYDQIHFVLNTVSLMSVLIPKLPQLHGVRIFGIN 151
[Close]
BLAST of Ca_19463.1 vs. DB:Swiss
Match: ORML3_DANRE (ORM1-like protein 3 OS=Danio rerio OX=7955 GN=ormdl3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.729e-32
Identity = 58/145 (40.00%), Postives = 85/145 (58.62%), Query Frame = 1 
Query:   34 ADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPGIAWTIVNLAHFLVTYHFFHWKKGTPFAD-DQGIYNRLTWWEQVDNGKQLTRNRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRIFGINA 465
            +++N NT      G+W +Y+L +    I++LS+   S  + WT+ NL H +  Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P++LY + S  T Y+      NT+++  +++ K P  H VR+FGIN 
Sbjct:    8 SEVNPNTRVMNSRGIWLSYVLGIGLLHIILLSIPFVSVPVVWTLTNLIHNMCMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIILYFLTSFYTKYDRVHFVINTISLLTVLIPKLPQFHGVRLFGINK 152
The following BLAST results are available for this feature:
BLAST of Ca_19463.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ORML1_MOUSE2.614e-3342.57ORM1-like protein 1 OS=Mus musculus OX=10090 GN=Or... [more]
ORML3_MOUSE4.126e-3342.36ORM1-like protein 3 OS=Mus musculus OX=10090 GN=Or... [more]
ORML3_RAT6.372e-3342.36ORM1-like protein 3 OS=Rattus norvegicus OX=10116 ... [more]
ORML3_HUMAN9.219e-3342.36ORM1-like protein 3 OS=Homo sapiens OX=9606 GN=ORM... [more]
ORML1_XENLA1.146e-3243.24ORM1-like protein 1 OS=Xenopus laevis OX=8355 GN=o... [more]
ORML3_BOVIN1.209e-3241.67ORM1-like protein 3 OS=Bos taurus OX=9913 GN=ORMDL... [more]
ORML3_PONAB1.604e-3241.67ORM1-like protein 3 OS=Pongo abelii OX=9601 GN=ORM... [more]
ORML2_HUMAN1.788e-3241.22ORM1-like protein 2 OS=Homo sapiens OX=9606 GN=ORM... [more]
ORML3_AILME5.532e-3241.67ORM1-like protein 3 OS=Ailuropoda melanoleuca OX=9... [more]
ORML3_DANRE9.729e-3240.00ORM1-like protein 3 OS=Danio rerio OX=7955 GN=ormd... [more]
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InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007203ORMDL familyPFAMPF04061ORMDLcoord: 15..149
e-value: 3.8E-50
score: 169.2
IPR007203ORMDL familyPIRSFPIRSF018147ORM1coord: 3..157
e-value: 4.0E-63
score: 210.6
IPR007203ORMDL familyPANTHERPTHR12665ORMDL PROTEINScoord: 1..157
NoneNo IPR availablePANTHERPTHR12665:SF18ORMDL FAMILY PROTEINcoord: 1..157

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_19463.1_ICC4958_v2 ID=Ca_19463.1_ICC4958_v2; Name=Ca_19463.1; organism=Cicer arietinum; type=mRNA; length=4013bp
ATGGCAAATCTGTACGTGAAAGCTGTGCCACCTGCGGATCTGAACAGGAA
CACAGAGTGGTTCACGTACCCTGGTGTTTGGACAACCTATATTCTCATCT
TGTTCTTTTCATGGATCCTTGTTCTCTCTGTTTTTGGTTGTTCACCTGGA
ATCGCTTGGACCATCGTCAATCTCGCTCATTTCCTTGTATCTTCTTCTTT
TACCCTTTCCTTTTCCTTTTTATTTTTCATTTTTAAGTATTGTTTTTATT
TTTTAATTGAATTGAATTCATGTCTTGTTGATTTGGCTTCTTTTTGTTGT
TCTTGTTGCCTGATTTACCCTTTGATGAATGATGATGACCTATTTGGAAA
CCTTATAGTTCTAGGATTTTTTTAGTGTTTGTATGCTATGTAGTACCGAT
ACCTCTGATCGAAGGCGTGTCGACGCGACACTGACACCTTGATTATATTA
TTCTATTGATTTATTTTCTCAAATTATTACCGGTATCTGTGATAGTTAGT
GTCCGGTGTTCGTATCAGTATCCCTGCTTCATAGTATGTGTGTTTATGTG
GTGGGGTAATTAGGTTATTGATTGGTTGAATAGTTTGTAGATGGGGAAAT
TGTGTTGTGTTGATTGTACTTTTGATGGATGAATTTATGCGCTTCATGTT
TTGTGGGGTTTGTGAGATGAGATATTGAATTTGATATTGAAGTTAATTAA
TTGTGCTCGAGTTGAAAAGGTTCAGATGTTAATTTATTGAGTCGTGATTC
AGATTGCATAGTTATTTAGTGCGGGGCTTGCTACTTCTTGTGTGTAAATG
ATTCAGCATTTTTATTCTTGCTGTTCAGAAATATCAAGTGAGAGAGAGAG
TTTTCATAAGATACATATAAATTAGAGACTCTGTCATCATATAAAATCAT
AATATGCAATTGGAAGTGAACTGTGTTCATGTAATTTTCACAGTTTCGAT
CTTCCTTGCAATGTTCTAAATTTTGTTACTTACCTCTATTCAGTTTAACT
TTAGAAGTACACTAGTTTAATTCAAAGAGCATTATAAGATGTGGGTATTC
TTGTGTAGTATATTAGTTTATTTGTTTGACATAGTGATATAACAAAAAAT
ACTTCATAAGTTCATATGATTTTGGCAGTAACTTGGAATAAATTAACTGT
TATGTCTTTCAATCATCGTTCAGTTTTTGGGATGGGTGGGTTGTTGTATT
TCTATATTTCCTAGTTGAACTTGAACATAATGTCGAGGCAACCTATTTTA
GCTCATGAATTTTAACATTTTGTTTTCAGTTATTGTAATGTTAATATGAT
CTCTTTACATGGCTTGATTGATTATGTTGTGTCTATCAGGTAACATATCA
CTTTTTCCACTGGAAGAAAGGAACTCCATTTGCTGATGATCAGGGGATCT
ACAACAGATTGACATGGTGGGAGCAGGTTGACAATGGAAAGCAGCTCACT
CGTAACAGGAAGTTTTTGACGGTTGTTCCTTTGGTTCTGTAAGTTCTCTT
TTAATTTTACATGCCTGCTTTTTTATATTTAAAGGTATTTTGTTCTTGCT
GATATCACAGGGTTTTTATATATTTTTTATGTACAGTTTTGTTATGTAAA
CACTAATTAGTCTATGCTCGTTAAAATAATAAAATGTTGTCTAAACTGAT
GTGGATGAATGAATGTATTTGTGTTGTGTGCCTTCTTGATCGTATTATTG
TAACTTGTGCATTTTATGCTCATTTTGATCTATAACTTGAAAATAGATGT
CACGTGTTTGTGGAAATCATGAATATGTCCAATTTAATTTACTTGTGGCT
ACCGATAGAGTTAGATTATTTTCTTTCTCTCATTATGTGTGGGCATGATA
TGTCATATGTGGTCATTCCCTTCTGGTTGTGAGGAGCACTTCTCTCAGCT
ATCTAGTGTTGTCAAATAGCAGCGCTATATTGTAGTGGAATCGTAACAAA
CTGTTGTTGTTTTCCAATACACGATTTAGTACAAAGTGTTGTCAAATGGT
GTGGCACTATGACACTAGTATAGCATAATTGAATAATGCTAGCAATACAC
TCTTTAACACACACTTTTGAAGACACTCTCTTTGATTGGTTAAAATCTAC
CTGGGCCCCACCAAATTCGTGGGGGACTCACATGATTTGGTGGGATCTAT
GAAAATCTTAACCAATCAAAGAAAGTGTGTTGCTAGCACTCCTCAACATA
ATTTGAACAAACCTTTATTTTCTGTGATCCACAATTGACAACATTGAGCC
TACCTGTGAAAACTCTCATCCAGTTAGCTCTATGTCCTAATATTTATATC
ATCATATTTAGTTGCTTCAGCTCTTGAATGACATTTGTTTTGAGGAAAGA
ATGAAAATGTTACTACTTATTCCCAATTAATGTAAGTGTAAACCTTGCAA
CTATTATGTAAGAAAACCGGATCATATATAAAGAAATCGTGTAGATTGTA
GCCTATTACTAAATGTTTTTTATTGGATAGATTGTAAATGATATGGGGTG
AGGAAGTAATAATGATAACAAGGTTTCTATGATGATAATTTCGATGTGTA
TGAGGATTAATGATTAGTTATGCCATAAAATGTTTTGAATGAAGAAATAT
CGTTATATATAAAAAGAAAGAATTTGACTCCACTCCGCCAAAGTGAAGAG
GGCATGAGAAAAAAGCGAAGAATATATAACCATTGGTTTGGAGATCAATA
GAATCTTTTGGCAACTTCACAAGTTGTTATATAGGTGCATGAATTTTATC
TGAATTTCAATAATTGGTTTTCTAGTCATCATTTATAACTTTGCACTTTG
GTCTTTAAAGTTTAAAGTGCTCCCTATTCCCTTCACTTTAGAGGAGCATG
AGTCAAAAAGAGAAGATAACAAATAACAAAGCCTCTTAACAAGGGCCCAA
AGGTTAAACAAAGAAAATGCACCGACAAACAAGTTAAAGCAAATCCCTTT
GAGTTTCTGGCTGAAATTTCCACTGTGCATCACTTTATGTCTCTATAATA
TATAGTTATCTTTTCCATTGTGCATCAACTATTAAATTATACTTGTAGGA
ATGTGCATATTGCATAATTTAGTACAAGTAGGGCTGTCAAACCTGGTTTT
TTCTGTTTACTAAGCATGTCCAGGAGCTAGTATCATAATATGCATTGCAT
GTTTTTGGTCTGTGATGTCATCCTAATGGGAGAGTCAAGAGAGGTGAAAA
TTAGATAATTTACTATTCTACTAATTGCATAAGTTTTGATGTACCATACA
AGATGATGCAGAATTTCGGGCACATGTAAACTATAAGATTGTAGTTGGTT
GGATGAAATGGAGAAGTGTATGATGTGTTTTTTGTGATCAAAAGTTGTCT
ATCAAGTTTCAAAGGAAGTTCTACTACAGAACTATTAGACTTGTGCGCTA
CAATATGATACTGAATTTCGAATTGTAAATGACCAAGCATAACTGTAGGT
GAAACTATTATAAATGACTTAAATCAAGATTTGCTAGCTGAGAATTTAGT
TCATGACACTACTATAAATGTATCATTTAATTCACGTAGCTATCCCATCT
ATGTGATTTTATTTATTTATTTATAAATAGATGAATGACCAAACATAATT
AAGTAGCATATTCATAATTAACATCAAAATTTAACAACTTATTAACAATA
AATAAAAGAAAGCTTTGGCCAACACTTAAACTAATATTGTTTGTATATTT
TGAAGAGTCTTATTAAGTGATCTATTTGATGACGAAAGAAGTCTTACTAA
ATGATTAATGTTTGATGGCTAGAGTTGTCTTATTGAATCAGCTATCTACA
ATCCAAATTTTTCTGCTATTATTGTTTAAAATTCAAATAGTTATTTACTG
TTTTTTTCTTCATCTGATTGACAGGTACTTGATAGCCTCACACACAACTG
ACTATGAACACCCCATGCTGTTCTTCAACACGGTCGCAGTGTTTGTTCTA
GTTGTCGCGAAGTTCCCCCACATGCACAAGGTCAGGATATTCGGTATCAA
CGCTGATAAGTAA
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protein sequence of Ca_19463.1_ICC4958_v2

>Ca_19463.1_ICC4958_v2 ID=Ca_19463.1_ICC4958_v2; Name=Ca_19463.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=157bp
MANLYVKAVPPADLNRNTEWFTYPGVWTTYILILFFSWILVLSVFGCSPG
IAWTIVNLAHFLVTYHFFHWKKGTPFADDQGIYNRLTWWEQVDNGKQLTR
NRKFLTVVPLVLYLIASHTTDYEHPMLFFNTVAVFVLVVAKFPHMHKVRI
FGINADK
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mRNA from alignment at Ca_LG_7:7079263..7083275+

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_19463.1_ICC4958_v2 ID=Ca_19463.1_ICC4958_v2; Name=Ca_19463.1; organism=Cicer arietinum; type=mRNA; length=4013bp; location=Sequence derived from: Ca_LG_7:7079263..7083275+ (Cicer arietinum
ATGGCAAATCTGTACGTGAAAGCTGTGCCACCTGCGGATCTGAACAGGAA
CACAGAGTGGTTCACGTACCCTGGTGTTTGGACAACCTATATTCTCATCT
TGTTCTTTTCATGGATCCTTGTTCTCTCTGTTTTTGGTTGTTCACCTGGA
ATCGCTTGGACCATCGTCAATCTCGCTCATTTCCTTGTATCTTCTTCTTT
TACCCTTTCCTTTTCCTTTTTATTTTTCATTTTTAAGTATTGTTTTTATT
TTTTAATTGAATTGAATTCATGTCTTGTTGATTTGGCTTCTTTTTGTTGT
TCTTGTTGCCTGATTTACCCTTTGATGAATGATGATGACCTATTTGGAAA
CCTTATAGTTCTAGGATTTTTTTAGTGTTTGTATGCTATGTAGTACCGAT
ACCTCTGATCGAAGGCGTGTCGACGCGACACTGACACCTTGATTATATTA
TTCTATTGATTTATTTTCTCAAATTATTACCGGTATCTGTGATAGTTAGT
GTCCGGTGTTCGTATCAGTATCCCTGCTTCATAGTATGTGTGTTTATGTG
GTGGGGTAATTAGGTTATTGATTGGTTGAATAGTTTGTAGATGGGGAAAT
TGTGTTGTGTTGATTGTACTTTTGATGGATGAATTTATGCGCTTCATGTT
TTGTGGGGTTTGTGAGATGAGATATTGAATTTGATATTGAAGTTAATTAA
TTGTGCTCGAGTTGAAAAGGTTCAGATGTTAATTTATTGAGTCGTGATTC
AGATTGCATAGTTATTTAGTGCGGGGCTTGCTACTTCTTGTGTGTAAATG
ATTCAGCATTTTTATTCTTGCTGTTCAGAAATATCAAGTGAGAGAGAGAG
TTTTCATAAGATACATATAAATTAGAGACTCTGTCATCATATAAAATCAT
AATATGCAATTGGAAGTGAACTGTGTTCATGTAATTTTCACAGTTTCGAT
CTTCCTTGCAATGTTCTAAATTTTGTTACTTACCTCTATTCAGTTTAACT
TTAGAAGTACACTAGTTTAATTCAAAGAGCATTATAAGATGTGGGTATTC
TTGTGTAGTATATTAGTTTATTTGTTTGACATAGTGATATAACAAAAAAT
ACTTCATAAGTTCATATGATTTTGGCAGTAACTTGGAATAAATTAACTGT
TATGTCTTTCAATCATCGTTCAGTTTTTGGGATGGGTGGGTTGTTGTATT
TCTATATTTCCTAGTTGAACTTGAACATAATGTCGAGGCAACCTATTTTA
GCTCATGAATTTTAACATTTTGTTTTCAGTTATTGTAATGTTAATATGAT
CTCTTTACATGGCTTGATTGATTATGTTGTGTCTATCAGGTAACATATCA
CTTTTTCCACTGGAAGAAAGGAACTCCATTTGCTGATGATCAGGGGATCT
ACAACAGATTGACATGGTGGGAGCAGGTTGACAATGGAAAGCAGCTCACT
CGTAACAGGAAGTTTTTGACGGTTGTTCCTTTGGTTCTGTAAGTTCTCTT
TTAATTTTACATGCCTGCTTTTTTATATTTAAAGGTATTTTGTTCTTGCT
GATATCACAGGGTTTTTATATATTTTTTATGTACAGTTTTGTTATGTAAA
CACTAATTAGTCTATGCTCGTTAAAATAATAAAATGTTGTCTAAACTGAT
GTGGATGAATGAATGTATTTGTGTTGTGTGCCTTCTTGATCGTATTATTG
TAACTTGTGCATTTTATGCTCATTTTGATCTATAACTTGAAAATAGATGT
CACGTGTTTGTGGAAATCATGAATATGTCCAATTTAATTTACTTGTGGCT
ACCGATAGAGTTAGATTATTTTCTTTCTCTCATTATGTGTGGGCATGATA
TGTCATATGTGGTCATTCCCTTCTGGTTGTGAGGAGCACTTCTCTCAGCT
ATCTAGTGTTGTCAAATAGCAGCGCTATATTGTAGTGGAATCGTAACAAA
CTGTTGTTGTTTTCCAATACACGATTTAGTACAAAGTGTTGTCAAATGGT
GTGGCACTATGACACTAGTATAGCATAATTGAATAATGCTAGCAATACAC
TCTTTAACACACACTTTTGAAGACACTCTCTTTGATTGGTTAAAATCTAC
CTGGGCCCCACCAAATTCGTGGGGGACTCACATGATTTGGTGGGATCTAT
GAAAATCTTAACCAATCAAAGAAAGTGTGTTGCTAGCACTCCTCAACATA
ATTTGAACAAACCTTTATTTTCTGTGATCCACAATTGACAACATTGAGCC
TACCTGTGAAAACTCTCATCCAGTTAGCTCTATGTCCTAATATTTATATC
ATCATATTTAGTTGCTTCAGCTCTTGAATGACATTTGTTTTGAGGAAAGA
ATGAAAATGTTACTACTTATTCCCAATTAATGTAAGTGTAAACCTTGCAA
CTATTATGTAAGAAAACCGGATCATATATAAAGAAATCGTGTAGATTGTA
GCCTATTACTAAATGTTTTTTATTGGATAGATTGTAAATGATATGGGGTG
AGGAAGTAATAATGATAACAAGGTTTCTATGATGATAATTTCGATGTGTA
TGAGGATTAATGATTAGTTATGCCATAAAATGTTTTGAATGAAGAAATAT
CGTTATATATAAAAAGAAAGAATTTGACTCCACTCCGCCAAAGTGAAGAG
GGCATGAGAAAAAAGCGAAGAATATATAACCATTGGTTTGGAGATCAATA
GAATCTTTTGGCAACTTCACAAGTTGTTATATAGGTGCATGAATTTTATC
TGAATTTCAATAATTGGTTTTCTAGTCATCATTTATAACTTTGCACTTTG
GTCTTTAAAGTTTAAAGTGCTCCCTATTCCCTTCACTTTAGAGGAGCATG
AGTCAAAAAGAGAAGATAACAAATAACAAAGCCTCTTAACAAGGGCCCAA
AGGTTAAACAAAGAAAATGCACCGACAAACAAGTTAAAGCAAATCCCTTT
GAGTTTCTGGCTGAAATTTCCACTGTGCATCACTTTATGTCTCTATAATA
TATAGTTATCTTTTCCATTGTGCATCAACTATTAAATTATACTTGTAGGA
ATGTGCATATTGCATAATTTAGTACAAGTAGGGCTGTCAAACCTGGTTTT
TTCTGTTTACTAAGCATGTCCAGGAGCTAGTATCATAATATGCATTGCAT
GTTTTTGGTCTGTGATGTCATCCTAATGGGAGAGTCAAGAGAGGTGAAAA
TTAGATAATTTACTATTCTACTAATTGCATAAGTTTTGATGTACCATACA
AGATGATGCAGAATTTCGGGCACATGTAAACTATAAGATTGTAGTTGGTT
GGATGAAATGGAGAAGTGTATGATGTGTTTTTTGTGATCAAAAGTTGTCT
ATCAAGTTTCAAAGGAAGTTCTACTACAGAACTATTAGACTTGTGCGCTA
CAATATGATACTGAATTTCGAATTGTAAATGACCAAGCATAACTGTAGGT
GAAACTATTATAAATGACTTAAATCAAGATTTGCTAGCTGAGAATTTAGT
TCATGACACTACTATAAATGTATCATTTAATTCACGTAGCTATCCCATCT
ATGTGATTTTATTTATTTATTTATAAATAGATGAATGACCAAACATAATT
AAGTAGCATATTCATAATTAACATCAAAATTTAACAACTTATTAACAATA
AATAAAAGAAAGCTTTGGCCAACACTTAAACTAATATTGTTTGTATATTT
TGAAGAGTCTTATTAAGTGATCTATTTGATGACGAAAGAAGTCTTACTAA
ATGATTAATGTTTGATGGCTAGAGTTGTCTTATTGAATCAGCTATCTACA
ATCCAAATTTTTCTGCTATTATTGTTTAAAATTCAAATAGTTATTTACTG
TTTTTTTCTTCATCTGATTGACAGGTACTTGATAGCCTCACACACAACTG
ACTATGAACACCCCATGCTGTTCTTCAACACGGTCGCAGTGTTTGTTCTA
GTTGTCGCGAAGTTCCCCCACATGCACAAGGTCAGGATATTCGGTATCAA
CGCTGATAAGTAA
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Coding sequence (CDS) from alignment at Ca_LG_7:7079263..7083275+

>Ca_19463.1_ICC4958_v2 ID=Ca_19463.1_ICC4958_v2; Name=Ca_19463.1; organism=Cicer arietinum; type=CDS; length=474bp; location=Sequence derived from: Ca_LG_7:7079263..7083275+ (Cicer arietinum
ATGGCAAATCTGTACGTGAAAGCTGTGCCACCTGCGGATCTGAACAGGAA
CACAGAGTGGTTCACGTACCCTGGTGTTTGGACAACCTATATTCTCATCT
TGTTCTTTTCATGGATCCTTGTTCTCTCTGTTTTTGGTTGTTCACCTGGA
ATCGCTTGGACCATCGTCAATCTCGCTCATTTCCTTGTAACATATCACTT
TTTCCACTGGAAGAAAGGAACTCCATTTGCTGATGATCAGGGGATCTACA
ACAGATTGACATGGTGGGAGCAGGTTGACAATGGAAAGCAGCTCACTCGT
AACAGGAAGTTTTTGACGGTTGTTCCTTTGGTTCTGTACTTGATAGCCTC
ACACACAACTGACTATGAACACCCCATGCTGTTCTTCAACACGGTCGCAG
TGTTTGTTCTAGTTGTCGCGAAGTTCCCCCACATGCACAAGGTCAGGATA
TTCGGTATCAACGCTGATAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007203ORMDL
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
GO:0016021integral component of membrane