Ca_29795.1, Ca_29795.1_ICC4958_v2 (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP312_ARATH (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana OX=3702 GN=LOI1 PE=1 SV=1) HSP 1 Score: 954.125 bits (2465), Expect = 0.000e+0 Identity = 461/685 (67.30%), Postives = 547/685 (79.85%), Query Frame = 1 Query: 1 MILHPQNLLGSLLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052 M L + LG LL++A+S +S LGR VHA I++T D+P P FL+N+L+NMYSKLD SA+LVL LT VV+WTSLISG N F TA + F MRR+ V PNDFTFP FKA ASL +P+TGKQ+HALA+K G+I DVFVGCSAFDMYCKT LR +AR +FDE+P RN TWNA+ISN+V DGR +AI AF EF + GHPNSITFCAFLNAC D L NLG QLH ++R G+ DVSV NGLIDFYGKC I SSE++F+ +G K N VSWCS++AA VQNHE+E+A +++L +RK+ VE +DFMISS+LSACA + GLELGRS+HA AVKACVE IFVGSALVD+YGKCG IE++EQ F EMPE+NLVT N+LIGGYAHQG V MAL LFEEM G TP+Y+T VS+LSACSRAGAVE GM+IF+SMR YGIEPGAEHY+CIVD+LGR+G+V+RAYEFI+ MP++PTISVWGAL ACRMHGK +LG +AAE LF+LD DSGNHV+LSN A+AGRW EA +R+E+K +GIKK GYSWI VKN++H FQAKD SH N EIQ L KLR EM+ AGY PD LSL+DLE+EEKA+EV +HSEK+ALAFGL++LP VPIRITKNLRICGDCHS KF+S V REIIVRDN+RFHRFKDG CSCKDYW Sbjct: 1 MSLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1) HSP 1 Score: 528.865 bits (1361), Expect = 5.213e-175 Identity = 278/665 (41.80%), Postives = 400/665 (60.15%), Query Frame = 1 Query: 73 GRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSL-DAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERAC-MVFLEARKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGAC-RMHG-KTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIAL-PQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052 GR VH H+I T + N LVNMY+K + A+ V V+W S+I+G N F+ A + +MRR + P FT + ASL G+Q+H +LK G +V V + +Y +TG E R +F MP + +WN+ I + RSL +A+ F N ITF + L+A LG+Q+H ++ ++ + N LI YGKCG++ E +FSR+ +R+ V+W SM++ + N +A +V+ + FM +++LSA A + LE G VHA +V+AC+E ++ VGSALVD+Y KCG ++ A + F MP RN +WN++I GYA G AL+LFE M L + P +VT V VLSACS AG +E G + FESM +YG+ P EH++C+ D+LGR+G +D+ +FI+ MPM+P + +W +LGAC R +G K +LGK AAE LF+L+ ++ N+V+L NM A+ GRWE+ RK+MKD +KK GYSW+ +K+ +H+F A D SH I L +L R+M++AGYVP T +L+DLE E K + YHSEK+A+AF L A +PIRI KNLR+CGDCHSA K+IS+I GR+II+RD++RFH F+DG CSC D+W Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ-TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995 HSP 2 Score: 154.451 bits (389), Expect = 1.421e-37 Identity = 124/462 (26.84%), Postives = 212/462 (45.89%), Query Frame = 1 Query: 127 FLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMP--MTGKQVHALALKGGQIYDVFVGCSAFDMYCK-TGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSN--LGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARK--EVEPTDFMISSMLS-----ACAELGGLELGRSVHALAVKACVED-NIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIF-ESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGA 1470 +L N+L+N Y + SA+ V L V+W ++SG N A + +M ++ + N + F V +A + + G+Q+H L K D V MY K G A F ++ +NS +WN+ IS Q G A F P TF + + + L Q+ I + G D+ V +GL+ + K G + + VF+++ RN V+ ++ LV+ E A +F++ +V P ++I +LS + AE GL+ GR VH + + D + +G+ LV++Y KCGSI +A +VF M +++ V+WN++I G G A+ ++ M + P TL+S LS+C+ + G QI ES++L GI+ ++ L +G ++ + +MP +S W +++GA Sbjct: 37 YLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR--RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL--GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490 HSP 3 Score: 120.939 bits (302), Expect = 7.028e-27 Identity = 88/294 (29.93%), Postives = 140/294 (47.62%), Query Frame = 1 Query: 424 DVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNAC--VDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKC-GDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELG--GLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAV 1287 DV++ + + Y +TG V AR +FDEMP RN +W +S ++G +A+ ++ + N F + L AC + ++ GRQ+H + + Y D V+N LI Y KC G + + F I K N VSW S+++ Q ++ A +F + + PT++ S+++ L + L + K+ + ++FVGS LV + K GS+ A +VF +M RN VT N L+ G Q A +LF +M SYV L+S S A V Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVK-NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV 327 HSP 4 Score: 98.5969 bits (244), Expect = 6.929e-20 Identity = 84/300 (28.00%), Postives = 141/300 (47.00%), Query Frame = 1 Query: 640 AFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELG--GLELGRSVHALAVKACVEDNIFVGSALVDLYGKC-GSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTL-GSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLF 1524 +F+ +CV R H+ + + +DV + N LI+ Y + GD VS+ VF + RN VSW +++ +N E + A + + KE + + S+L AC E+G G+ GR +H L K + V + L+ +Y KC GS+ A F ++ +N V+WN++I Y+ GD A R+F M GSR ++ +LV+ +ACS R ++ G+ + +V +SG + A + M +++ G ++G R K G+ A KLF Sbjct: 8 SFVQSCVG--HRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL-RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT--TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR----QKWGE-EATKLF 297
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1) HSP 1 Score: 505.368 bits (1300), Expect = 4.954e-166 Identity = 267/678 (39.38%), Postives = 404/678 (59.59%), Query Frame = 1 Query: 34 LLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMT-GKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGH---PNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEAR-KEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052 +L +AV +S LG+ VH ++ L +SN L+NMY KL A+ V +++W S+I+G N V A F + R + P+ +T V KA++SL ++ KQVH A+K + D FV + D Y + EA +F E + + WNA ++ Q S D K F +H + T C N G+Q+HA+ ++ GY D+ V++G++D Y KCGD+ +++ F I +V +W +M++ ++N EEERA VF + R V P +F I+++ A + L LE GR +HA A+K ++ FVG++LVD+Y KCGSI++A +F + N+ WNA++ G A G+ L+LF++M S G+ P VT + VLSACS +G V + SM +YGI+P EHY+C+ D LGR+GLV +A I++M ME + S++ LL ACR+ G T+ GK A KL EL+ +DS +V+LSNM A+A +W+E + R MK +KK+ G+SWI VKN+IH+F D S+ + I + + R++K+ GYVP+T+ +L D+E+EEK ++YHSEK+A+AFGL++ P PIR+ KNLR+CGDCH+A+K+I+++ REI++RD +RFHRFKDG CSC DYW Sbjct: 321 MLATAVKVDSLALGQQVHCMALKL-GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQ---SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV-AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK--SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990 HSP 2 Score: 176.407 bits (446), Expect = 9.223e-45 Identity = 116/422 (27.49%), Postives = 206/422 (48.82%), Query Frame = 1 Query: 238 ISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRS-NLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKEVEPT-DFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIF-ESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTK 1494 +S +H+ ++ F +M V + TF + + + G+QVH +ALK G + V S +MYCK AR +FD M R+ +WN+ I+ Q+G ++A+ F + L P+ T + L A +L +Q+H ++ D V+ LID Y + + +E++F R ++V+W +M+A Q+H+ + +F K+ E + DF ++++ C L + G+ VHA A+K+ + +++V S ++D+Y KCG + A+ F +P + V W +I G G+ A +F +M L G+ P T+ ++ A S A+E+G QI +++LN +P +VD+ + G +D AY + + M I+ W A+L HG+ K Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER--HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL--MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGK 701 HSP 3 Score: 131.339 bits (329), Expect = 3.581e-30 Identity = 143/569 (25.13%), Postives = 242/569 (42.53%), Query Frame = 1 Query: 34 LLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVT-----AFLHFTNMRRDSVHPNDFTFPGVFK---------ASASLH-----MPMTGKQVHALAL----------KGGQIY-------DVFVGCSAFDMYCKTGLRVEARNMF----------DEMPHRNSATWNAYISNAVQ--------DGRSLDAIAAFKEFLCVHGHP--------------------NSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLE-ARKEVEPTDFMISSMLSACAELG-GLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVD--------RAYEFIQNMPMEPTISVWGALLGACRMHGK 1488 L +A++++ +LG+ HA I+ + P FL N+L++MYSK L A+ V +V+W S+++ + V AFL F +R+D V+ + T + K AS S H + + G + A AL K G++ DV + Y + G + EA ++ +E+ R A + S+A Q D S+ I + L + H + +TF L V LG+Q+H ++ G ++V+N LI+ Y K + VF + +R+++SW S++A + QN E A +F++ R ++P + ++S+L A + L GL L + VH A+K + FV +AL+D Y + ++ AE +F E +LV WNA++ GY D L+LF M +G TL +V C A+ +G Q+ Y I+ G + +DL SG++D A +F + P W ++ C +G+ Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENP-ERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS-ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH--KQGERSDDFTLATVFKTCGFLFAINQGKQVHA-----YAIKSGYD-----LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGE 598
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 8.897e-160 Identity = 253/687 (36.83%), Postives = 399/687 (58.08%), Query Frame = 1 Query: 7 LHPQNLLGSLLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFD--EMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNA--CVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEA-RKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052 +H + SL++SA T+ + L + +HA ++ FL L++ S + A+ V P + W ++I G N F A L ++NM+ V P+ FTFP + KA + L G+ VHA + G DVFV +Y K AR +F+ +P R +W A +S Q+G ++A+ F + + P+ + + LNA C+ L+ GR +HA +V+ G + + + L Y KCG + +++++F ++ + N++ W +M++ +N A +F E K+V P I+S +SACA++G LE RS++ ++ D++F+ SAL+D++ KCGS+E A VF +R++V W+A+I GY G A+ L+ M G G+ P+ VT + +L AC+ +G V G F M ++ I P +HYAC++DLLGR+G +D+AYE I+ MP++P ++VWGALL AC+ H +LG+ AA++LF +D ++G++V LSN+ A+A W+ +R MK+ G+ K+VG SW+ V+ R+ F+ D SH R EI+ + + +KE G+V + + SL DL DEE + HSE+IA+A+GLI+ PQ P+RITKNLR C +CH+A K IS++V REI+VRD +RFH FKDG CSC DYW Sbjct: 18 IHSDSFYASLIDSA--THKAQL-KQIHARLL-VLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ--GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG--GVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 479.945 bits (1234), Expect = 6.669e-159 Identity = 264/751 (35.15%), Postives = 399/751 (53.13%), Query Frame = 1 Query: 13 PQNLLGSLLESAVSTNSSILGRAVHAHI-IRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHR-----------------------------------NSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRI-------------GRKRN---------------------VVSWCSMLAALVQNHEEERACMVFLEAR-KEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052 PQ+++G LES+ SS L + AH I ++S L+ YS + N A LVL PT+ +++SLI + F + F+ M + P+ P +FK A L GKQ+H ++ G D FV S F MY + G +AR +FD M + N +WN +S + G +A+ F++ + P+ +T + L + D+ N+GR +H ++++ G +D V + +ID YGK G + +F++ G RN VVSW S++A QN ++ A +F E + V+P I SML AC + L GRS H AV+ + DN+ VGSAL+D+Y KCG I ++ VF MP +NLV WN+L+ G++ G + +FE +L + P +++ S+LSAC + G + G + F+ M YGI+P EHY+C+V+LLGR+G + AY+ I+ MP EP VWGALL +CR+ L +IAAEKLF L+ + G +V+LSN+ A+ G W E IR +M+ +G+KKN G SWI VKNR++ A D SH + +I + ++ +EM+++G+ P+ + +L D+E++E+ +W HSEK+A+ FGL+ P P+++ KNLRICGDCH+ IKFIS GREI +RD +RFH FKDG CSC D+W Sbjct: 13 PQSIVG-FLESSSYHWSSSLSKTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE--SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 480.33 bits (1235), Expect = 2.030e-157 Identity = 255/677 (37.67%), Postives = 401/677 (59.23%), Query Frame = 1 Query: 67 ILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQI-YDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGH-PNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVF-----LE-------ARKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPME-PTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052 ++G+ VHA+ +R + L SF+ N LV MY KL L S++++L +VTW +++S N + + A + M + V P++FT V A + L M TGK++HA ALK G + + FVG + DMYC + R +FD M R WNA I+ Q+ +A+ F G NS T + ACV + + +H F+V+ G D V N L+D Y + G I + +F ++ R++V+W +M+ V + E A ++ LE +R ++P + ++L +CA L L G+ +HA A+K + ++ VGSALVD+Y KCG ++ + +VF ++P++N++TWN +I Y G+ A+ L M + +G+ P+ VT +SV +ACS +G V+ G++IF M+ +YG+EP ++HYAC+VDLLGR+G + AY+ + MP + W +LLGA R+H ++G+IAA+ L +L+ + ++V+L+N+ +SAG W++AT +R+ MK+ G++K G SWI + +H F A DSSH ++ ++ L L M++ GYVPDT+ L ++E++EK + HSEK+A+AFG++ IR+ KNLR+C DCH A KFIS+IV REII+RD RFHRFK+G CSC DYW Sbjct: 219 MMGKQVHAYGLRKGE--LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV--QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890 HSP 2 Score: 194.512 bits (493), Expect = 4.408e-51 Identity = 135/511 (26.42%), Postives = 245/511 (47.95%), Query Frame = 1 Query: 7 LHPQNL-LGSLLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMP---MTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNAC--VDTLRSNLGRQLHAFIVRCG-YKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVF--LEARKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSR---------GMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHG 1485 + P N +LL++ LG+ +HAH+ + ++N LVN+Y K + V V+W SLIS ++ A F M ++V P+ FT V A ++L MP M GKQVHA L+ G++ + F+ + MY K G ++ + R+ TWN +S+ Q+ + L+A+ +E + P+ T + L AC ++ LR+ G++LHA+ ++ G E+ V + L+D Y C ++S VF + R + W +M+A QN ++ A ++F +E + ++ ++ AC G ++H VK ++ + FV + L+D+Y + G I+ A ++F +M +R+LVTWN +I GY AL L +M R + P+ +TL+++L +C+ A+ +G +I + + + + +VD+ + G + + + +P + I+ W ++ A MHG Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT--GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT-WNVIIMAYGMHG 597 HSP 3 Score: 185.652 bits (470), Expect = 4.870e-48 Identity = 129/406 (31.77%), Postives = 205/406 (50.49%), Query Frame = 1 Query: 226 WTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYD-VFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSN---LGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELGGLELGRSVHALAVK-ACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNM 1425 W L+ V + A L + +M + P+++ FP + KA A L GKQ+HA K G D V V + ++Y K G +FD + RN +WN+ IS+ + A+ AF+ L + P+S T + + AC + +G+Q+HA+ +R G + + + N L+ YGK G + SS+++ G R++V+W ++L++L QN + A E E VEP +F ISS+L AC+ L L G+ +HA A+K +++N FVGSALVD+Y C + + +VF M +R + WNA+I GY+ AL LF M S G+ + T+ V+ AC R+GA R I + G++ ++D+ R G +D A M Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME-ESAGLLANSTTMAGVVPACVRSGAFSRKEAI-HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466 HSP 4 Score: 134.42 bits (337), Expect = 2.956e-31 Identity = 95/324 (29.32%), Postives = 158/324 (48.77%), Query Frame = 1 Query: 514 RNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKED-VSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELG---GLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGA 1470 R+ W + + V+ +A+ + + + + P++ F A L A D LG+Q+HA + + GY D V+VAN L++ Y KCGD + VF RI +RN VSW S++++L + E A F E VEP+ F + S+++AC+ L GL +G+ VHA ++ E N F+ + LV +YGK G + +++ + R+LVTWN ++ + AL EM L G+ P T+ SVL ACS + G ++ N ++ + + +VD+ V M + I +W A++ Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS-ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL--EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAG 378 HSP 5 Score: 79.7221 bits (195), Expect = 4.957e-14 Identity = 51/157 (32.48%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 808 IGRKRNVVSWCSMLAALVQNHEEERACMVFLEA-RKEVEPTDFMISSMLSACAELGGLELGRSVHALAVK-ACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACS 1272 I + R+ W +L + V+++ A + +++ ++P ++ ++L A A+L +ELG+ +HA K D++ V + LV+LY KCG +VF + ERN V+WN+LI MAL F M + PS TLVSV++ACS Sbjct: 56 ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML--DENVEPSSFTLVSVVTACS 210
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1) HSP 1 Score: 469.159 bits (1206), Expect = 1.970e-156 Identity = 242/581 (41.65%), Postives = 350/581 (60.24%), Query Frame = 1 Query: 316 PNDFTFPG-VFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEA-RKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052 P D F + K + + G+ VHA L+ +D+ +G + +MY K G EAR +F++MP R+ TW IS Q R DA+ F + L PN T + + A R G QLH F V+CG+ +V V + L+D Y + G + ++LVF + RN VSW +++A + E+A +F R P+ F +S+ AC+ G LE G+ VHA +K+ + F G+ L+D+Y K GSI +A ++F + +R++V+WN+L+ YA G A+ FEEM G+ P+ ++ +SVL+ACS +G ++ G +E M+ + GI P A HY +VDLLGR+G ++RA FI+ MP+EPT ++W ALL ACRMH T+LG AAE +FELD D G HV+L N+ AS GRW +A +RK+MK+ G+KK SW+ ++N IH+F A D H + EI ++ ++KE GYVPDT+ + ++ +E+ + YHSEKIALAF L+ P I I KN+R+CGDCH+AIK S++VGREIIVRD +RFH FKDG CSCKDYW Sbjct: 57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR--RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633 HSP 2 Score: 185.267 bits (469), Expect = 5.661e-49 Identity = 122/385 (31.69%), Postives = 186/385 (48.31%), Query Frame = 1 Query: 16 QNLLGSLLESAVSTNSSILGRAVHAHIIRT---HDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARK-EVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMP-ERNLVTWNALIGG 1155 + +LL+ I GR VHAHI+++ HD + N L+NMY+K L A+ V VTWT+LISG + R A L F M R PN+FT V KA+A+ G Q+H +K G +V VG + D+Y + GL +A+ +FD + RN +WNA I+ + + A+ F+ L P+ ++ + AC T G+ +HA++++ G K N L+D Y K G I + +F R+ KR+VVSW S+L A Q+ + A F E R+ + P + S+L+AC+ G L+ G + L K + + +VDL G+ G + A + EMP E W AL+ Sbjct: 60 RRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDI----VMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 469.159 bits (1206), Expect = 3.959e-154 Identity = 250/662 (37.76%), Postives = 385/662 (58.16%), Query Frame = 1 Query: 70 LGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEAR-KEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052 +G+ +H ++++ L F L NMY+K +N A+ V +V+W ++++G N A +M +++ P+ T V A ++L + GK++H A++ G V + + DMY K G AR +FD M RN +WN+ I VQ+ +A+ F++ L P ++ L+AC D GR +H V G +VSV N LI Y KC ++ ++ +F ++ + R +VSW +M+ QN A F + R + V+P F S+++A AEL + +H + +++C++ N+FV +ALVD+Y KCG+I A +F M ER++ TWNA+I GY G AL LFEEM G+ + P+ VT +SV+SACS +G VE G++ F M+ NY IE +HY +VDLLGR+G ++ A++FI MP++P ++V+GA+LGAC++H + AAE+LFEL+ D G HV+L+N+ +A WE+ +R M G++K G S + +KN +H F + ++H + +I A L KL +KEAGYVPDTNL L +E++ K + HSEK+A++FGL+ I + KNLR+C DCH+A K+IS + GREI+VRD RFH FK+G CSC DYW Sbjct: 153 VGKEIHGLLVKS-GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT--IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809 HSP 2 Score: 213.772 bits (543), Expect = 4.915e-58 Identity = 139/468 (29.70%), Postives = 229/468 (48.93%), Query Frame = 1 Query: 127 FLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFE 1527 F LV+++ + ++ A V V + +++ G A F MR D V P + F + K GK++H L +K G D+F +MY K EAR +FD MP R+ +WN ++ Q+G + A+ K + P+ IT + L A ++G+++H + +R G+ V+++ L+D Y KCG + ++ +F + +RNVVSW SM+ A VQN + A ++F + E V+PTD + L ACA+LG LE GR +H L+V+ ++ N+ V ++L+ +Y KC ++ A +F ++ R LV+WNA+I G+A G AL F +M SR + P T VSV++A + I + + ++ +VD+ + G + A I +M E ++ W A++ HG GK A E LFE Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR--SRTVKPDTFTYVSVITAIAELSITHHAKWI-HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG---FGKAALE-LFE 528
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 467.233 bits (1201), Expect = 3.929e-153 Identity = 249/660 (37.73%), Postives = 375/660 (56.82%), Query Frame = 1 Query: 82 VHAHIIRT-HDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEAR-KEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHV-DSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052 VHA ++ DT +SN L+ Y ++ L+ A ++ VT+ +LI+G + + + F MR+ P+DFTF GV KA LH G+Q+HAL++ G D VG D Y K +E R +FDEMP + ++N IS+ Q + ++ F+E C+ + F L+ + +GRQLH + + V N L+D Y KC +EL+F + +R VSW ++++ VQ +F + R + +++L A A L LG+ +HA +++ +N+F GS LVD+Y KCGSI++A QVF EMP+RN V+WNALI +A GD A+ F +M G+ P V+++ VL+ACS G VE+G + F++M YGI P +HYAC++DLLGR+G A + + MP EP +W ++L ACR+H L + AAEKLF ++ + D+ +V +SN+ A+AG WE+ ++K M++ GIKK YSW+ V ++IHVF + D +H EI + +L E++ GY PDT+ + D++++ K + YHSE++A+AF LI+ P+ PI + KNLR C DCH+AIK IS+IV REI VRD RFH F +G CSC DYW Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI--ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825 HSP 2 Score: 183.341 bits (464), Expect = 1.883e-47 Identity = 137/470 (29.15%), Postives = 225/470 (47.87%), Query Frame = 1 Query: 133 SNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDS--VHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCS--AFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEAR-KEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFE 1527 +N +++ + K ++SA+ + TVVTWT L+ N F AF F M R S P+ TF + QVHA A+K G + F+ S YC+ A +F+E+P ++S T+N I+ +DG ++I F + P+ TF L A V LG+QLHA V G+ D SV N ++DFY K ++ + ++F + + + VS+ ++++ Q + E + F E + + +F ++MLS A L L++GR +H A+ A + + VG++LVD+Y KC E AE +F +P+R V+W ALI GY +G G L+LF +M GS + T +VL A + ++ G Q+ + + G + +VD+ + G + A + + MP +S W AL+ A +G + A K+ E Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR-GS-NLRADQSTFATVLKASASFASLLLGKQL-HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGDGEAAIGAFAKMIE 546
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 452.981 bits (1164), Expect = 7.942e-150 Identity = 233/622 (37.46%), Postives = 360/622 (57.88%), Query Frame = 1 Query: 217 VVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITF------CAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGD--IVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVF--LEARKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052 V +W S+I+ + A L F++MR+ S++P +FP KA +SL +GKQ H A G D+FV + MY G +AR +FDE+P RN +W + I +G +LDA++ FK+ L + F + ++AC L +H+F+++ G+ VSV N L+D Y K G+ + + +F +I K + VS+ S+++ Q+ A VF L K V +S++L A + G L +G+ +H ++ +ED++ VG++++D+Y KCG +E A + F M +N+ +W A+I GY G AL LF M G+ P+Y+T VSVL+ACS AG G + F +M+ +G+EPG EHY C+VDLLGR+G + +AY+ IQ M M+P +W +LL ACR+H +L +I+ +LFELD + G +++LS++ A AGRW++ +R MK+ G+ K G+S + + +HVF D H + +I L +L R++ EAGYV +T+ D+++EEK + HSEK+A+AFG++ + + KNLR+C DCH+ IK IS+IV RE +VRD RFH FKDG CSC DYW Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI--DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659 HSP 2 Score: 114.775 bits (286), Expect = 3.073e-25 Identity = 102/374 (27.27%), Postives = 173/374 (46.26%), Query Frame = 1 Query: 127 FLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPG----VFKASASLHMPMTG--KQVHALALKGGQIYDVFVGCSAFDMYCKTGLR--VEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHP-NSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELG-GLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPER-NLVTWNALIGGYAHQGDVGMA----LRLFE 1200 F+S+ L+ MYS L A+ V +V+WTS+I G N + A F ++ D +D F V SA +P G + +H+ +K G V VG + D Y K G AR +FD++ ++ ++N+ +S Q G S +A F+ + N+IT L A + +G+ +H ++R G ++DV V +ID Y KCG + ++ F R+ + +NV SW +M+A + +A +F V P S+L+AC+ G +E R +A+ + VE + +VDL G+ G ++ A + M + + + W++L+ +V +A RLFE Sbjct: 112 FVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM-KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484 HSP 3 Score: 107.842 bits (268), Expect = 4.805e-23 Identity = 91/336 (27.08%), Postives = 153/336 (45.54%), Query Frame = 1 Query: 796 VFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARK-EVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSR----GMTPSYVTLVSVLSACSRAGA---------------VERGMQIFESMRLNY--GIEPGAE---------------HYACIVDLLGRSGLVDRAYEFIQNMPMEPTIS----VWGALLGACRMHGKTKLGKIAAEKLFEL---DHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAV 1671 +F+R K +V SW S++A L ++ + A + F RK + PT + AC+ L + G+ H A + +IFV SAL+ +Y CG +E+A +VF E+P+RN+V+W ++I GY G+ A+ LF+++ + M + LVSV+SACSR A +RG+ + ++ Y G E G Y I+ + +SG+ + A+E + + ++ +L A G ++GK +++ + D V G ++ +M GR E A MK+ KNV SW A+ Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII--DMYCKCGRVETARKAFDRMKN----KNV-RSWTAM 359 The following BLAST results are available for this feature:
BLAST of Ca_29795.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_29795.1_ICC4958_v2 ID=Ca_29795.1_ICC4958_v2; Name=Ca_29795.1; organism=Cicer arietinum; type=mRNA; length=2242bpback to top protein sequence of Ca_29795.1_ICC4958_v2 >Ca_29795.1_ICC4958_v2 ID=Ca_29795.1_ICC4958_v2; Name=Ca_29795.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=684bpback to top mRNA from alignment at scaffold23232:17230..19471- Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_29795.1_ICC4958_v2 ID=Ca_29795.1_ICC4958_v2; Name=Ca_29795.1; organism=Cicer arietinum; type=mRNA; length=2242bp; location=Sequence derived from: scaffold23232:17230..19471- (Cicer arietinumback to top Coding sequence (CDS) from alignment at scaffold23232:17230..19471- >Ca_29795.1_ICC4958_v2 ID=Ca_29795.1_ICC4958_v2; Name=Ca_29795.1; organism=Cicer arietinum; type=CDS; length=2055bp; location=Sequence derived from: scaffold23232:17230..19471- (Cicer arietinumback to top |