Ca_29795.1, Ca_29795.1_ICC4958_v2 (mRNA) Cicer arietinum

Transcript Overview
NameCa_29795.1
Unique NameCa_29795.1_ICC4958_v2
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length2242
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
scaffold23232supercontigscaffold23232:17230..19471 -Cicer arietinum ICC 4958 genome v2n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum ICC 4958 genome v22015-08-11
InterProScan: C. arietinum ICC 4958, v2.0 (desi)2019-05-21
BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot2019-05-21
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ca_29795Ca_29795_ICC4958_v2Cicer arietinumgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_29795.1.cds2Ca_29795.1.cds2_ICC4958_v2Cicer arietinumCDS
Ca_29795.1.cds1Ca_29795.1.cds1_ICC4958_v2Cicer arietinumCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_29795.1.exon2Ca_29795.1.exon2_ICC4958_v2Cicer arietinumexon
Ca_29795.1.exon1Ca_29795.1.exon1_ICC4958_v2Cicer arietinumexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_29795.1_ICC4958_v2Ca_29795.1_ICC4958_v2Cicer arietinumpolypeptide


Homology
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP312_ARATH (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana OX=3702 GN=LOI1 PE=1 SV=1)

HSP 1 Score: 954.125 bits (2465), Expect = 0.000e+0
Identity = 461/685 (67.30%), Postives = 547/685 (79.85%), Query Frame = 1
Query:    1 MILHPQNLLGSLLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052
            M L   + LG LL++A+S +S  LGR VHA I++T D+P P FL+N+L+NMYSKLD   SA+LVL LT    VV+WTSLISG   N  F TA + F  MRR+ V PNDFTFP  FKA ASL +P+TGKQ+HALA+K G+I DVFVGCSAFDMYCKT LR +AR +FDE+P RN  TWNA+ISN+V DGR  +AI AF EF  + GHPNSITFCAFLNAC D L  NLG QLH  ++R G+  DVSV NGLIDFYGKC  I SSE++F+ +G K N VSWCS++AA VQNHE+E+A +++L +RK+ VE +DFMISS+LSACA + GLELGRS+HA AVKACVE  IFVGSALVD+YGKCG IE++EQ F EMPE+NLVT N+LIGGYAHQG V MAL LFEEM     G TP+Y+T VS+LSACSRAGAVE GM+IF+SMR  YGIEPGAEHY+CIVD+LGR+G+V+RAYEFI+ MP++PTISVWGAL  ACRMHGK +LG +AAE LF+LD  DSGNHV+LSN  A+AGRW EA  +R+E+K +GIKK  GYSWI VKN++H FQAKD SH  N EIQ  L KLR EM+ AGY PD  LSL+DLE+EEKA+EV +HSEK+ALAFGL++LP  VPIRITKNLRICGDCHS  KF+S  V REIIVRDN+RFHRFKDG CSCKDYW
Sbjct:    1 MSLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684          
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 528.865 bits (1361), Expect = 5.213e-175
Identity = 278/665 (41.80%), Postives = 400/665 (60.15%), Query Frame = 1
Query:   73 GRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSL-DAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERAC-MVFLEARKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGAC-RMHG-KTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIAL-PQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052
            GR VH H+I T        + N LVNMY+K   +  A+ V         V+W S+I+G   N  F+ A   + +MRR  + P  FT      + ASL     G+Q+H  +LK G   +V V  +   +Y +TG   E R +F  MP  +  +WN+ I    +  RSL +A+  F          N ITF + L+A        LG+Q+H   ++    ++ +  N LI  YGKCG++   E +FSR+  +R+ V+W SM++  + N    +A  +V+   +       FM +++LSA A +  LE G  VHA +V+AC+E ++ VGSALVD+Y KCG ++ A + F  MP RN  +WN++I GYA  G    AL+LFE M L  +   P +VT V VLSACS AG +E G + FESM  +YG+ P  EH++C+ D+LGR+G +D+  +FI+ MPM+P + +W  +LGAC R +G K +LGK AAE LF+L+  ++ N+V+L NM A+ GRWE+    RK+MKD  +KK  GYSW+ +K+ +H+F A D SH     I   L +L R+M++AGYVP T  +L+DLE E K   + YHSEK+A+AF L A     +PIRI KNLR+CGDCHSA K+IS+I GR+II+RD++RFH F+DG CSC D+W
Sbjct:  332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ-TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995          

HSP 2 Score: 154.451 bits (389), Expect = 1.421e-37
Identity = 124/462 (26.84%), Postives = 212/462 (45.89%), Query Frame = 1
Query:  127 FLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMP--MTGKQVHALALKGGQIYDVFVGCSAFDMYCK-TGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSN--LGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARK--EVEPTDFMISSMLS-----ACAELGGLELGRSVHALAVKACVED-NIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIF-ESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGA 1470
            +L N+L+N Y +     SA+ V     L   V+W  ++SG   N     A +   +M ++ +  N + F  V +A   +     + G+Q+H L  K     D  V      MY K  G    A   F ++  +NS +WN+ IS   Q G    A   F         P   TF + +         +  L  Q+   I + G   D+ V +GL+  + K G +  +  VF+++   RN V+   ++  LV+    E A  +F++     +V P  ++I  +LS     + AE  GL+ GR VH   +   + D  + +G+ LV++Y KCGSI +A +VF  M +++ V+WN++I G    G    A+  ++ M      + P   TL+S LS+C+     + G QI  ES++L  GI+        ++ L   +G ++   +   +MP    +S W +++GA
Sbjct:   37 YLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR--RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL--GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490          

HSP 3 Score: 120.939 bits (302), Expect = 7.028e-27
Identity = 88/294 (29.93%), Postives = 140/294 (47.62%), Query Frame = 1
Query:  424 DVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNAC--VDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKC-GDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELG--GLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAV 1287
            DV++  +  + Y +TG  V AR +FDEMP RN  +W   +S   ++G   +A+   ++ +      N   F + L AC  + ++    GRQ+H  + +  Y  D  V+N LI  Y KC G +  +   F  I  K N VSW S+++   Q  ++  A  +F   + +   PT++   S+++    L    + L   +     K+ +  ++FVGS LV  + K GS+  A +VF +M  RN VT N L+ G   Q     A +LF +M         SYV L+S     S A  V
Sbjct:   35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVK-NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV 327          

HSP 4 Score: 98.5969 bits (244), Expect = 6.929e-20
Identity = 84/300 (28.00%), Postives = 141/300 (47.00%), Query Frame = 1
Query:  640 AFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELG--GLELGRSVHALAVKACVEDNIFVGSALVDLYGKC-GSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTL-GSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLF 1524
            +F+ +CV        R  H+ + +    +DV + N LI+ Y + GD VS+  VF  +   RN VSW  +++   +N E + A +   +  KE +    +   S+L AC E+G  G+  GR +H L  K     +  V + L+ +Y KC GS+  A   F ++  +N V+WN++I  Y+  GD   A R+F  M   GSR    ++ +LV+  +ACS      R ++         G+       + +V    +SG +  A +    M     +++ G ++G  R     K G+  A KLF
Sbjct:    8 SFVQSCVG--HRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL-RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT--TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR----QKWGE-EATKLF 297          
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 505.368 bits (1300), Expect = 4.954e-166
Identity = 267/678 (39.38%), Postives = 404/678 (59.59%), Query Frame = 1
Query:   34 LLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMT-GKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGH---PNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEAR-KEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052
            +L +AV  +S  LG+ VH   ++     L   +SN L+NMY KL     A+ V        +++W S+I+G   N   V A   F  + R  + P+ +T   V KA++SL   ++  KQVH  A+K   + D FV  +  D Y +     EA  +F E  + +   WNA ++   Q   S D     K F  +H      +  T       C      N G+Q+HA+ ++ GY  D+ V++G++D Y KCGD+ +++  F  I    +V +W +M++  ++N EEERA  VF + R   V P +F I+++  A + L  LE GR +HA A+K    ++ FVG++LVD+Y KCGSI++A  +F  +   N+  WNA++ G A  G+    L+LF++M   S G+ P  VT + VLSACS +G V    +   SM  +YGI+P  EHY+C+ D LGR+GLV +A   I++M ME + S++  LL ACR+ G T+ GK  A KL EL+ +DS  +V+LSNM A+A +W+E  + R  MK   +KK+ G+SWI VKN+IH+F   D S+ +   I   +  + R++K+ GYVP+T+ +L D+E+EEK   ++YHSEK+A+AFGL++ P   PIR+ KNLR+CGDCH+A+K+I+++  REI++RD +RFHRFKDG CSC DYW
Sbjct:  321 MLATAVKVDSLALGQQVHCMALKL-GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQ---SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV-AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK--SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990          

HSP 2 Score: 176.407 bits (446), Expect = 9.223e-45
Identity = 116/422 (27.49%), Postives = 206/422 (48.82%), Query Frame = 1
Query:  238 ISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRS-NLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKEVEPT-DFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIF-ESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTK 1494
            +S  +H+ ++      F +M    V  +  TF  +   +  +     G+QVH +ALK G    + V  S  +MYCK      AR +FD M  R+  +WN+ I+   Q+G  ++A+  F + L     P+  T  + L A        +L +Q+H   ++     D  V+  LID Y +   +  +E++F R     ++V+W +M+A   Q+H+  +   +F    K+ E + DF ++++   C  L  +  G+ VHA A+K+  + +++V S ++D+Y KCG +  A+  F  +P  + V W  +I G    G+   A  +F +M L   G+ P   T+ ++  A S   A+E+G QI   +++LN   +P       +VD+  + G +D AY   + + M   I+ W A+L     HG+ K
Sbjct:  287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER--HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL--MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGK 701          

HSP 3 Score: 131.339 bits (329), Expect = 3.581e-30
Identity = 143/569 (25.13%), Postives = 242/569 (42.53%), Query Frame = 1
Query:   34 LLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVT-----AFLHFTNMRRDSVHPNDFTFPGVFK---------ASASLH-----MPMTGKQVHALAL----------KGGQIY-------DVFVGCSAFDMYCKTGLRVEARNMF----------DEMPHRNSATWNAYISNAVQ--------DGRSLDAIAAFKEFLCVHGHP--------------------NSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLE-ARKEVEPTDFMISSMLSACAELG-GLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVD--------RAYEFIQNMPMEPTISVWGALLGACRMHGK 1488
             L +A++++  +LG+  HA I+   + P   FL N+L++MYSK   L  A+ V        +V+W S+++    +   V      AFL F  +R+D V+ +  T   + K         AS S H     + + G +  A AL          K G++        DV +       Y + G + EA ++           +E+  R  A  +   S+A Q        D  S+  I    + L  + H                     + +TF   L   V      LG+Q+H   ++ G    ++V+N LI+ Y K      +  VF  +  +R+++SW S++A + QN  E  A  +F++  R  ++P  + ++S+L A + L  GL L + VH  A+K     + FV +AL+D Y +   ++ AE +F E    +LV WNA++ GY    D    L+LF  M    +G      TL +V   C    A+ +G Q+       Y I+ G +     +DL   SG++D         A +F  +    P    W  ++  C  +G+
Sbjct:   45 FLRNAITSSDLMLGKCTHARILTFEENP-ERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS-ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH--KQGERSDDFTLATVFKTCGFLFAINQGKQVHA-----YAIKSGYD-----LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGE 598          
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 479.945 bits (1234), Expect = 8.897e-160
Identity = 253/687 (36.83%), Postives = 399/687 (58.08%), Query Frame = 1
Query:    7 LHPQNLLGSLLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFD--EMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNA--CVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEA-RKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052
            +H  +   SL++SA  T+ + L + +HA ++         FL   L++  S    +  A+ V      P +  W ++I G   N  F  A L ++NM+   V P+ FTFP + KA + L     G+ VHA   + G   DVFV      +Y K      AR +F+   +P R   +W A +S   Q+G  ++A+  F +   +   P+ +   + LNA  C+  L+   GR +HA +V+ G + +  +   L   Y KCG + +++++F ++ +  N++ W +M++   +N     A  +F E   K+V P    I+S +SACA++G LE  RS++    ++   D++F+ SAL+D++ KCGS+E A  VF    +R++V W+A+I GY   G    A+ L+  M  G  G+ P+ VT + +L AC+ +G V  G   F  M  ++ I P  +HYAC++DLLGR+G +D+AYE I+ MP++P ++VWGALL AC+ H   +LG+ AA++LF +D  ++G++V LSN+ A+A  W+    +R  MK+ G+ K+VG SW+ V+ R+  F+  D SH R  EI+  +  +   +KE G+V + + SL DL DEE    +  HSE+IA+A+GLI+ PQ  P+RITKNLR C +CH+A K IS++V REI+VRD +RFH FKDG CSC DYW
Sbjct:   18 IHSDSFYASLIDSA--THKAQL-KQIHARLL-VLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ--GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG--GVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694          
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2)

HSP 1 Score: 479.945 bits (1234), Expect = 6.669e-159
Identity = 264/751 (35.15%), Postives = 399/751 (53.13%), Query Frame = 1
Query:   13 PQNLLGSLLESAVSTNSSILGRAVHAHI-IRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHR-----------------------------------NSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRI-------------GRKRN---------------------VVSWCSMLAALVQNHEEERACMVFLEAR-KEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052
            PQ+++G  LES+    SS L +   AH  I         ++S  L+  YS  +  N A LVL     PT+ +++SLI      + F  +   F+ M    + P+    P +FK  A L     GKQ+H ++   G   D FV  S F MY + G   +AR +FD M  +                                   N  +WN  +S   + G   +A+  F++   +   P+ +T  + L +  D+   N+GR +H ++++ G  +D  V + +ID YGK G +     +F++              G  RN                     VVSW S++A   QN ++  A  +F E +   V+P    I SML AC  +  L  GRS H  AV+  + DN+ VGSAL+D+Y KCG I  ++ VF  MP +NLV WN+L+ G++  G     + +FE  +L    + P +++  S+LSAC + G  + G + F+ M   YGI+P  EHY+C+V+LLGR+G +  AY+ I+ MP EP   VWGALL +CR+     L +IAAEKLF L+  + G +V+LSN+ A+ G W E   IR +M+ +G+KKN G SWI VKNR++   A D SH +  +I   + ++ +EM+++G+ P+ + +L D+E++E+   +W HSEK+A+ FGL+  P   P+++ KNLRICGDCH+ IKFIS   GREI +RD +RFH FKDG CSC D+W
Sbjct:   13 PQSIVG-FLESSSYHWSSSLSKTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE--SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760          
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 480.33 bits (1235), Expect = 2.030e-157
Identity = 255/677 (37.67%), Postives = 401/677 (59.23%), Query Frame = 1
Query:   67 ILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQI-YDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGH-PNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVF-----LE-------ARKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPME-PTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052
            ++G+ VHA+ +R  +  L SF+ N LV MY KL  L S++++L       +VTW +++S    N + + A  +   M  + V P++FT   V  A + L M  TGK++HA ALK G +  + FVG +  DMYC     +  R +FD M  R    WNA I+   Q+    +A+  F       G   NS T    + ACV +   +    +H F+V+ G   D  V N L+D Y + G I  +  +F ++   R++V+W +M+   V +   E A ++      LE       +R  ++P    + ++L +CA L  L  G+ +HA A+K  +  ++ VGSALVD+Y KCG ++ + +VF ++P++N++TWN +I  Y   G+   A+ L   M +  +G+ P+ VT +SV +ACS +G V+ G++IF  M+ +YG+EP ++HYAC+VDLLGR+G +  AY+ +  MP +      W +LLGA R+H   ++G+IAA+ L +L+   + ++V+L+N+ +SAG W++AT +R+ MK+ G++K  G SWI   + +H F A DSSH ++ ++   L  L   M++ GYVPDT+  L ++E++EK   +  HSEK+A+AFG++       IR+ KNLR+C DCH A KFIS+IV REII+RD  RFHRFK+G CSC DYW
Sbjct:  219 MMGKQVHAYGLRKGE--LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV--QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890          

HSP 2 Score: 194.512 bits (493), Expect = 4.408e-51
Identity = 135/511 (26.42%), Postives = 245/511 (47.95%), Query Frame = 1
Query:    7 LHPQNL-LGSLLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMP---MTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNAC--VDTLRSNLGRQLHAFIVRCG-YKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVF--LEARKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSR---------GMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHG 1485
            + P N    +LL++        LG+ +HAH+ +         ++N LVN+Y K     +   V         V+W SLIS      ++  A   F  M  ++V P+ FT   V  A ++L MP   M GKQVHA  L+ G++ + F+  +   MY K G    ++ +      R+  TWN  +S+  Q+ + L+A+   +E +     P+  T  + L AC  ++ LR+  G++LHA+ ++ G   E+  V + L+D Y  C  ++S   VF  +   R +  W +M+A   QN  ++ A ++F  +E    +      ++ ++ AC   G      ++H   VK  ++ + FV + L+D+Y + G I+ A ++F +M +R+LVTWN +I GY        AL L  +M    R          + P+ +TL+++L +C+   A+ +G +I  +  +   +       + +VD+  + G +  + +    +P +  I+ W  ++ A  MHG
Sbjct:   93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT--GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT-WNVIIMAYGMHG 597          

HSP 3 Score: 185.652 bits (470), Expect = 4.870e-48
Identity = 129/406 (31.77%), Postives = 205/406 (50.49%), Query Frame = 1
Query:  226 WTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYD-VFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSN---LGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELGGLELGRSVHALAVK-ACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNM 1425
            W  L+   V +     A L + +M    + P+++ FP + KA A L     GKQ+HA   K G   D V V  +  ++Y K G       +FD +  RN  +WN+ IS+     +   A+ AF+  L  +  P+S T  + + AC +        +G+Q+HA+ +R G + +  + N L+  YGK G + SS+++    G  R++V+W ++L++L QN +   A     E   E VEP +F ISS+L AC+ L  L  G+ +HA A+K   +++N FVGSALVD+Y  C  + +  +VF  M +R +  WNA+I GY+       AL LF  M   S G+  +  T+  V+ AC R+GA  R   I     +  G++        ++D+  R G +D A      M
Sbjct:   65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME-ESAGLLANSTTMAGVVPACVRSGAFSRKEAI-HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466          

HSP 4 Score: 134.42 bits (337), Expect = 2.956e-31
Identity = 95/324 (29.32%), Postives = 158/324 (48.77%), Query Frame = 1
Query:  514 RNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKED-VSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELG---GLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGA 1470
            R+   W   + + V+     +A+  + + + +   P++  F A L A  D     LG+Q+HA + + GY  D V+VAN L++ Y KCGD  +   VF RI  +RN VSW S++++L    + E A   F     E VEP+ F + S+++AC+ L    GL +G+ VHA  ++   E N F+ + LV +YGK G + +++ +      R+LVTWN ++        +  AL    EM L   G+ P   T+ SVL ACS    +  G ++      N  ++  +   + +VD+      V         M  +  I +W A++  
Sbjct:   60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS-ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL--EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAG 378          

HSP 5 Score: 79.7221 bits (195), Expect = 4.957e-14
Identity = 51/157 (32.48%), Postives = 83/157 (52.87%), Query Frame = 1
Query:  808 IGRKRNVVSWCSMLAALVQNHEEERACMVFLEA-RKEVEPTDFMISSMLSACAELGGLELGRSVHALAVK-ACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACS 1272
            I + R+   W  +L + V+++    A + +++     ++P ++   ++L A A+L  +ELG+ +HA   K     D++ V + LV+LY KCG      +VF  + ERN V+WN+LI          MAL  F  M      + PS  TLVSV++ACS
Sbjct:   56 ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML--DENVEPSSFTLVSVVTACS 210          
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 469.159 bits (1206), Expect = 1.970e-156
Identity = 242/581 (41.65%), Postives = 350/581 (60.24%), Query Frame = 1
Query:  316 PNDFTFPG-VFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEA-RKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052
            P D  F   + K      + + G+ VHA  L+    +D+ +G +  +MY K G   EAR +F++MP R+  TW   IS   Q  R  DA+  F + L     PN  T  + + A     R   G QLH F V+CG+  +V V + L+D Y + G +  ++LVF  +   RN VSW +++A   +    E+A  +F    R    P+ F  +S+  AC+  G LE G+ VHA  +K+  +   F G+ L+D+Y K GSI +A ++F  + +R++V+WN+L+  YA  G    A+  FEEM     G+ P+ ++ +SVL+ACS +G ++ G   +E M+ + GI P A HY  +VDLLGR+G ++RA  FI+ MP+EPT ++W ALL ACRMH  T+LG  AAE +FELD  D G HV+L N+ AS GRW +A  +RK+MK+ G+KK    SW+ ++N IH+F A D  H +  EI     ++  ++KE GYVPDT+  +  ++ +E+   + YHSEKIALAF L+  P    I I KN+R+CGDCH+AIK  S++VGREIIVRD +RFH FKDG CSCKDYW
Sbjct:   57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR--RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633          

HSP 2 Score: 185.267 bits (469), Expect = 5.661e-49
Identity = 122/385 (31.69%), Postives = 186/385 (48.31%), Query Frame = 1
Query:   16 QNLLGSLLESAVSTNSSILGRAVHAHIIRT---HDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARK-EVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMP-ERNLVTWNALIGG 1155
            +    +LL+        I GR VHAHI+++   HD      + N L+NMY+K   L  A+ V         VTWT+LISG   + R   A L F  M R    PN+FT   V KA+A+      G Q+H   +K G   +V VG +  D+Y + GL  +A+ +FD +  RN  +WNA I+   +   +  A+  F+  L     P+  ++ +   AC  T     G+ +HA++++ G K      N L+D Y K G I  +  +F R+  KR+VVSW S+L A  Q+   + A   F E R+  + P +    S+L+AC+  G L+ G   + L  K  +    +    +VDL G+ G +  A +   EMP E     W AL+  
Sbjct:   60 RRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDI----VMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439          
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 469.159 bits (1206), Expect = 3.959e-154
Identity = 250/662 (37.76%), Postives = 385/662 (58.16%), Query Frame = 1
Query:   70 LGRAVHAHIIRTHDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEAR-KEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052
            +G+ +H  ++++    L  F    L NMY+K   +N A+ V        +V+W ++++G   N     A     +M  +++ P+  T   V  A ++L +   GK++H  A++ G    V +  +  DMY K G    AR +FD M  RN  +WN+ I   VQ+    +A+  F++ L     P  ++    L+AC D      GR +H   V  G   +VSV N LI  Y KC ++ ++  +F ++ + R +VSW +M+    QN     A   F + R + V+P  F   S+++A AEL      + +H + +++C++ N+FV +ALVD+Y KCG+I  A  +F  M ER++ TWNA+I GY   G    AL LFEEM  G+  + P+ VT +SV+SACS +G VE G++ F  M+ NY IE   +HY  +VDLLGR+G ++ A++FI  MP++P ++V+GA+LGAC++H      + AAE+LFEL+  D G HV+L+N+  +A  WE+   +R  M   G++K  G S + +KN +H F +  ++H  + +I A L KL   +KEAGYVPDTNL L  +E++ K   +  HSEK+A++FGL+       I + KNLR+C DCH+A K+IS + GREI+VRD  RFH FK+G CSC DYW
Sbjct:  153 VGKEIHGLLVKS-GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT--IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809          

HSP 2 Score: 213.772 bits (543), Expect = 4.915e-58
Identity = 139/468 (29.70%), Postives = 229/468 (48.93%), Query Frame = 1
Query:  127 FLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFE 1527
            F    LV+++ +   ++ A  V         V + +++ G         A   F  MR D V P  + F  + K          GK++H L +K G   D+F      +MY K     EAR +FD MP R+  +WN  ++   Q+G +  A+   K     +  P+ IT  + L A       ++G+++H + +R G+   V+++  L+D Y KCG + ++  +F  +  +RNVVSW SM+ A VQN   + A ++F +   E V+PTD  +   L ACA+LG LE GR +H L+V+  ++ N+ V ++L+ +Y KC  ++ A  +F ++  R LV+WNA+I G+A  G    AL  F +M   SR + P   T VSV++A +          I   + +   ++        +VD+  + G +  A   I +M  E  ++ W A++     HG    GK A E LFE
Sbjct:   70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR--SRTVKPDTFTYVSVITAIAELSITHHAKWI-HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG---FGKAALE-LFE 528          
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 467.233 bits (1201), Expect = 3.929e-153
Identity = 249/660 (37.73%), Postives = 375/660 (56.82%), Query Frame = 1
Query:   82 VHAHIIRT-HDTPLPSFLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEAR-KEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHV-DSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052
            VHA  ++   DT     +SN L+  Y ++  L+ A ++         VT+ +LI+G   +  +  +   F  MR+    P+DFTF GV KA   LH    G+Q+HAL++  G   D  VG    D Y K    +E R +FDEMP  +  ++N  IS+  Q  +   ++  F+E  C+     +  F   L+   +     +GRQLH   +       + V N L+D Y KC     +EL+F  +  +R  VSW ++++  VQ         +F + R   +       +++L A A    L LG+ +HA  +++   +N+F GS LVD+Y KCGSI++A QVF EMP+RN V+WNALI  +A  GD   A+  F +M     G+ P  V+++ VL+ACS  G VE+G + F++M   YGI P  +HYAC++DLLGR+G    A + +  MP EP   +W ++L ACR+H    L + AAEKLF ++ + D+  +V +SN+ A+AG WE+   ++K M++ GIKK   YSW+ V ++IHVF + D +H    EI   + +L  E++  GY PDT+  + D++++ K   + YHSE++A+AF LI+ P+  PI + KNLR C DCH+AIK IS+IV REI VRD  RFH F +G CSC DYW
Sbjct:  169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI--ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825          

HSP 2 Score: 183.341 bits (464), Expect = 1.883e-47
Identity = 137/470 (29.15%), Postives = 225/470 (47.87%), Query Frame = 1
Query:  133 SNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDS--VHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCS--AFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEAR-KEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFE 1527
            +N +++ + K   ++SA+ +       TVVTWT L+     N  F  AF  F  M R S    P+  TF  +              QVHA A+K G   + F+  S      YC+      A  +F+E+P ++S T+N  I+   +DG   ++I  F +       P+  TF   L A V      LG+QLHA  V  G+  D SV N ++DFY K   ++ + ++F  +  + + VS+  ++++  Q  + E +   F E +    +  +F  ++MLS  A L  L++GR +H  A+ A  +  + VG++LVD+Y KC   E AE +F  +P+R  V+W ALI GY  +G  G  L+LF +M  GS  +     T  +VL A +   ++  G Q+  +  +  G        + +VD+  + G +  A +  + MP    +S W AL+ A   +G  +    A  K+ E
Sbjct:   82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR-GS-NLRADQSTFATVLKASASFASLLLGKQL-HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGDGEAAIGAFAKMIE 546          
BLAST of Ca_29795.1 vs. DB:Swiss
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 452.981 bits (1164), Expect = 7.942e-150
Identity = 233/622 (37.46%), Postives = 360/622 (57.88%), Query Frame = 1
Query:  217 VVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAFDMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHPNSITF------CAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGD--IVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVF--LEARKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAEHYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 2052
            V +W S+I+    +     A L F++MR+ S++P   +FP   KA +SL    +GKQ H  A   G   D+FV  +   MY   G   +AR +FDE+P RN  +W + I     +G +LDA++ FK+ L      +   F       + ++AC       L   +H+F+++ G+   VSV N L+D Y K G+  +  +  +F +I  K + VS+ S+++   Q+     A  VF  L   K V      +S++L A +  G L +G+ +H   ++  +ED++ VG++++D+Y KCG +E A + F  M  +N+ +W A+I GY   G    AL LF  M     G+ P+Y+T VSVL+ACS AG    G + F +M+  +G+EPG EHY C+VDLLGR+G + +AY+ IQ M M+P   +W +LL ACR+H   +L +I+  +LFELD  + G +++LS++ A AGRW++   +R  MK+ G+ K  G+S + +   +HVF   D  H +  +I   L +L R++ EAGYV +T+    D+++EEK   +  HSEK+A+AFG++       + + KNLR+C DCH+ IK IS+IV RE +VRD  RFH FKDG CSC DYW
Sbjct:   41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI--DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659          

HSP 2 Score: 114.775 bits (286), Expect = 3.073e-25
Identity = 102/374 (27.27%), Postives = 173/374 (46.26%), Query Frame = 1
Query:  127 FLSNHLVNMYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMRRDSVHPNDFTFPG----VFKASASLHMPMTG--KQVHALALKGGQIYDVFVGCSAFDMYCKTGLR--VEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEFLCVHGHP-NSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARKE-VEPTDFMISSMLSACAELG-GLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPER-NLVTWNALIGGYAHQGDVGMA----LRLFE 1200
            F+S+ L+ MYS    L  A+ V        +V+WTS+I G   N   + A   F ++  D    +D  F      V   SA   +P  G  + +H+  +K G    V VG +  D Y K G      AR +FD++  ++  ++N+ +S   Q G S +A   F+  +       N+IT    L A   +    +G+ +H  ++R G ++DV V   +ID Y KCG + ++   F R+ + +NV SW +M+A    +    +A  +F       V P      S+L+AC+  G  +E  R  +A+  +  VE  +     +VDL G+ G ++ A  +   M  + + + W++L+       +V +A     RLFE
Sbjct:  112 FVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM-KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484          

HSP 3 Score: 107.842 bits (268), Expect = 4.805e-23
Identity = 91/336 (27.08%), Postives = 153/336 (45.54%), Query Frame = 1
Query:  796 VFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFLEARK-EVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFEEMTLGSR----GMTPSYVTLVSVLSACSRAGA---------------VERGMQIFESMRLNY--GIEPGAE---------------HYACIVDLLGRSGLVDRAYEFIQNMPMEPTIS----VWGALLGACRMHGKTKLGKIAAEKLFEL---DHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNVGYSWIAV 1671
            +F+R   K +V SW S++A L ++ +   A + F   RK  + PT       + AC+ L  +  G+  H  A     + +IFV SAL+ +Y  CG +E+A +VF E+P+RN+V+W ++I GY   G+   A+ LF+++ +        M    + LVSV+SACSR  A                +RG+ +  ++   Y  G E G                  Y  I+ +  +SG+ + A+E  + +     ++        +L A    G  ++GK   +++  +   D V  G  ++  +M    GR E A      MK+    KNV  SW A+
Sbjct:   31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII--DMYCKCGRVETARKAFDRMKN----KNV-RSWTAM 359          
The following BLAST results are available for this feature:
BLAST of Ca_29795.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PP312_ARATH0.000e+067.30Pentatricopeptide repeat-containing protein At4g14... [more]
PP373_ARATH5.213e-17541.80Putative pentatricopeptide repeat-containing prote... [more]
PP347_ARATH4.954e-16639.38Pentatricopeptide repeat-containing protein At4g33... [more]
PP224_ARATH8.897e-16036.83Pentatricopeptide repeat-containing protein At3g12... [more]
PPR53_ARATH6.669e-15935.15Pentatricopeptide repeat-containing protein At1g20... [more]
PP285_ARATH2.030e-15737.67Pentatricopeptide repeat-containing protein At3g57... [more]
PP252_ARATH1.970e-15641.65Pentatricopeptide repeat-containing protein At3g24... [more]
PPR32_ARATH3.959e-15437.76Pentatricopeptide repeat-containing protein At1g11... [more]
PP206_ARATH3.929e-15337.73Putative pentatricopeptide repeat-containing prote... [more]
PP258_ARATH7.942e-15037.46Pentatricopeptide repeat-containing protein At3g26... [more]
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InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 523..546
e-value: 0.39
score: 11.1
coord: 151..172
e-value: 0.19
score: 12.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 71..117
e-value: 6.8E-9
score: 35.8
coord: 375..424
e-value: 1.5E-9
score: 37.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 377..402
e-value: 1.6E-6
score: 25.9
coord: 74..107
e-value: 1.6E-4
score: 19.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 412..447
score: 8.035
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 72..106
score: 9.504
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 344..374
score: 8.385
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 275..305
score: 6.818
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 514..548
score: 8.013
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 208..242
score: 5.853
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 243..273
score: 6.27
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 448..478
score: 6.544
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 375..411
score: 10.106
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 309..343
score: 5.02
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 142..176
score: 7.278
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 551..674
e-value: 2.5E-39
score: 134.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 328..442
e-value: 1.1E-26
score: 96.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 181..327
e-value: 6.2E-20
score: 73.8
coord: 7..171
e-value: 4.4E-15
score: 57.8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 313..541
coord: 226..332
coord: 126..220
coord: 13..119

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_29795.1_ICC4958_v2 ID=Ca_29795.1_ICC4958_v2; Name=Ca_29795.1; organism=Cicer arietinum; type=mRNA; length=2242bp
ATGATCTTGCATCCTCAAAATCTGCTAGGAAGTTTACTTGAATCAGCTGT
TTCAACCAACAGTTCCATCCTTGGTCGTGCTGTCCATGCACACATAATTA
GGACACATGACACTCCTCTTCCATCTTTCCTCTCCAACCACCTCGTCAAC
ATGTACTCCAAACTCGACCTTCTTAACTCAGCCCAACTCGTTCTCTCACT
CACCCACCTTCCCACCGTTGTTACTTGGACCTCTCTCATCTCTGGTTGCG
TTCATAACCGTCGTTTTGTCACCGCTTTCCTTCATTTCACCAACATGCGT
CGTGACTCTGTTCACCCTAATGACTTCACTTTTCCTGGTGTTTTCAAAGC
TTCGGCTTCATTGCATATGCCCATGACTGGTAAACAAGTTCATGCACTTG
CGTTAAAGGGTGGCCAAATCTATGATGTGTTTGTAGGATGCAGTGCTTTT
GATATGTACTGCAAAACTGGCCTTCGTGTTGAAGCTCGTAACATGTTTGA
TGAAATGCCTCACAGAAACTCTGCCACGTGGAATGCTTATATTTCTAATG
CAGTTCAAGATGGCCGCTCTCTCGATGCAATTGCAGCATTCAAGGAGTTT
CTTTGTGTGCATGGACACCCGAATTCCATTACATTTTGTGCATTTCTTAA
TGCTTGTGTTGACACGTTGAGATCGAATCTCGGGCGTCAGTTACATGCAT
TTATAGTTCGATGTGGATATAAAGAGGATGTTTCGGTTGCCAATGGGCTT
ATTGACTTCTATGGAAAATGTGGAGACATTGTATCTTCTGAATTGGTTTT
TAGTAGAATTGGCAGGAAGAGGAATGTTGTTTCATGGTGCTCTATGCTTG
CTGCTCTTGTGCAAAACCATGAGGAAGAGAGGGCTTGTATGGTTTTCCTG
GAGGCAAGGAAAGAAGTTGAGCCGACAGATTTCATGATATCAAGCATGCT
CAGTGCTTGTGCTGAACTTGGAGGGCTTGAATTAGGCAGGTCAGTTCATG
CTCTAGCTGTCAAAGCATGTGTTGAGGATAATATATTTGTCGGGAGTGCA
CTTGTTGACTTGTATGGTAAATGTGGAAGTATAGAGAATGCAGAACAAGT
TTTCACTGAAATGCCTGAAAGAAACCTAGTCACATGGAATGCATTGATAG
GTGGATATGCACATCAAGGCGATGTTGGCATGGCTTTGCGTCTATTTGAG
GAGATGACATTGGGCAGCCGTGGTATGACACCGAGTTATGTGACACTAGT
TTCTGTATTGTCAGCTTGTAGTAGGGCTGGGGCAGTGGAGAGAGGCATGC
AGATATTTGAATCAATGAGATTGAACTATGGGATTGAACCAGGTGCTGAG
CATTATGCTTGTATTGTGGACCTTCTAGGGAGATCTGGTTTGGTAGACCG
TGCTTATGAATTTATTCAAAATATGCCAATGGAACCGACTATTTCAGTGT
GGGGAGCTCTACTCGGAGCTTGTAGGATGCACGGGAAAACAAAATTGGGA
AAAATTGCAGCTGAAAAGTTATTTGAGCTTGATCATGTAGACTCTGGCAA
CCATGTAGTGCTTTCTAACATGCTTGCATCTGCTGGCAGGTATTGATTTT
AAACCATGCTAACTAATTTTCCTTCGTAAATGGCCTTGAAGAGTAAGATG
ATTTGATAATTTTCTTCCTTTTTTTTCTTTTCATTTTTCTACTTGCTTAA
AGTGATACTGTAACTTTCATATGACACAAACATTAGCATAGCTCTTCTGG
TCATGCTTATCAATTGTTAAATGCAGATGGGAAGAAGCCACTATTATCAG
GAAGGAAATGAAAGATATTGGCATAAAAAAGAATGTTGGTTATAGTTGGA
TTGCTGTGAAGAACAGAATCCATGTTTTCCAAGCAAAGGATAGTTCTCAT
GAAAGGAACACAGAAATTCAAGCTATGCTAGGTAAGCTCAGACGGGAGAT
GAAGGAAGCTGGGTATGTTCCTGATACCAATCTATCACTCTTTGATTTAG
AAGATGAAGAAAAGGCTTCAGAAGTTTGGTACCATAGTGAGAAGATTGCT
CTTGCTTTTGGTCTCATAGCTCTTCCTCAAGTAGTGCCCATACGGATCAC
AAAAAATCTTAGGATTTGTGGAGATTGCCATAGTGCCATTAAGTTCATTT
CAAGAATTGTTGGAAGAGAAATTATTGTGAGAGATAATCATCGTTTTCAT
CGCTTTAAGGATGGTTGCTGCTCTTGTAAAGATTATTGGTAA
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protein sequence of Ca_29795.1_ICC4958_v2

>Ca_29795.1_ICC4958_v2 ID=Ca_29795.1_ICC4958_v2; Name=Ca_29795.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=684bp
MILHPQNLLGSLLESAVSTNSSILGRAVHAHIIRTHDTPLPSFLSNHLVN
MYSKLDLLNSAQLVLSLTHLPTVVTWTSLISGCVHNRRFVTAFLHFTNMR
RDSVHPNDFTFPGVFKASASLHMPMTGKQVHALALKGGQIYDVFVGCSAF
DMYCKTGLRVEARNMFDEMPHRNSATWNAYISNAVQDGRSLDAIAAFKEF
LCVHGHPNSITFCAFLNACVDTLRSNLGRQLHAFIVRCGYKEDVSVANGL
IDFYGKCGDIVSSELVFSRIGRKRNVVSWCSMLAALVQNHEEERACMVFL
EARKEVEPTDFMISSMLSACAELGGLELGRSVHALAVKACVEDNIFVGSA
LVDLYGKCGSIENAEQVFTEMPERNLVTWNALIGGYAHQGDVGMALRLFE
EMTLGSRGMTPSYVTLVSVLSACSRAGAVERGMQIFESMRLNYGIEPGAE
HYACIVDLLGRSGLVDRAYEFIQNMPMEPTISVWGALLGACRMHGKTKLG
KIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATIIRKEMKDIGIKKNV
GYSWIAVKNRIHVFQAKDSSHERNTEIQAMLGKLRREMKEAGYVPDTNLS
LFDLEDEEKASEVWYHSEKIALAFGLIALPQVVPIRITKNLRICGDCHSA
IKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW
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mRNA from alignment at scaffold23232:17230..19471-

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_29795.1_ICC4958_v2 ID=Ca_29795.1_ICC4958_v2; Name=Ca_29795.1; organism=Cicer arietinum; type=mRNA; length=2242bp; location=Sequence derived from: scaffold23232:17230..19471- (Cicer arietinum
ATGATCTTGCATCCTCAAAATCTGCTAGGAAGTTTACTTGAATCAGCTGT TTCAACCAACAGTTCCATCCTTGGTCGTGCTGTCCATGCACACATAATTA GGACACATGACACTCCTCTTCCATCTTTCCTCTCCAACCACCTCGTCAAC ATGTACTCCAAACTCGACCTTCTTAACTCAGCCCAACTCGTTCTCTCACT CACCCACCTTCCCACCGTTGTTACTTGGACCTCTCTCATCTCTGGTTGCG TTCATAACCGTCGTTTTGTCACCGCTTTCCTTCATTTCACCAACATGCGT CGTGACTCTGTTCACCCTAATGACTTCACTTTTCCTGGTGTTTTCAAAGC TTCGGCTTCATTGCATATGCCCATGACTGGTAAACAAGTTCATGCACTTG CGTTAAAGGGTGGCCAAATCTATGATGTGTTTGTAGGATGCAGTGCTTTT GATATGTACTGCAAAACTGGCCTTCGTGTTGAAGCTCGTAACATGTTTGA TGAAATGCCTCACAGAAACTCTGCCACGTGGAATGCTTATATTTCTAATG CAGTTCAAGATGGCCGCTCTCTCGATGCAATTGCAGCATTCAAGGAGTTT CTTTGTGTGCATGGACACCCGAATTCCATTACATTTTGTGCATTTCTTAA TGCTTGTGTTGACACGTTGAGATCGAATCTCGGGCGTCAGTTACATGCAT TTATAGTTCGATGTGGATATAAAGAGGATGTTTCGGTTGCCAATGGGCTT ATTGACTTCTATGGAAAATGTGGAGACATTGTATCTTCTGAATTGGTTTT TAGTAGAATTGGCAGGAAGAGGAATGTTGTTTCATGGTGCTCTATGCTTG CTGCTCTTGTGCAAAACCATGAGGAAGAGAGGGCTTGTATGGTTTTCCTG GAGGCAAGGAAAGAAGTTGAGCCGACAGATTTCATGATATCAAGCATGCT CAGTGCTTGTGCTGAACTTGGAGGGCTTGAATTAGGCAGGTCAGTTCATG CTCTAGCTGTCAAAGCATGTGTTGAGGATAATATATTTGTCGGGAGTGCA CTTGTTGACTTGTATGGTAAATGTGGAAGTATAGAGAATGCAGAACAAGT TTTCACTGAAATGCCTGAAAGAAACCTAGTCACATGGAATGCATTGATAG GTGGATATGCACATCAAGGCGATGTTGGCATGGCTTTGCGTCTATTTGAG GAGATGACATTGGGCAGCCGTGGTATGACACCGAGTTATGTGACACTAGT TTCTGTATTGTCAGCTTGTAGTAGGGCTGGGGCAGTGGAGAGAGGCATGC AGATATTTGAATCAATGAGATTGAACTATGGGATTGAACCAGGTGCTGAG CATTATGCTTGTATTGTGGACCTTCTAGGGAGATCTGGTTTGGTAGACCG TGCTTATGAATTTATTCAAAATATGCCAATGGAACCGACTATTTCAGTGT GGGGAGCTCTACTCGGAGCTTGTAGGATGCACGGGAAAACAAAATTGGGA AAAATTGCAGCTGAAAAGTTATTTGAGCTTGATCATGTAGACTCTGGCAA CCATGTAGTGCTTTCTAACATGCTTGCATCTGCTGGCAGGTATTGATTTT AAACCATGCTAACTAATTTTCCTTCGTAAATGGCCTTGAAGAGTAAGATG ATTTGATAATTTTCTTCCTTTTTTTTCTTTTCATTTTTCTACTTGCTTAA AGTGATACTGTAACTTTCATATGACACAAACATTAGCATAGCTCTTCTGG TCATGCTTATCAATTGTTAAATGCAGATGGGAAGAAGCCACTATTATCAG GAAGGAAATGAAAGATATTGGCATAAAAAAGAATGTTGGTTATAGTTGGA TTGCTGTGAAGAACAGAATCCATGTTTTCCAAGCAAAGGATAGTTCTCAT GAAAGGAACACAGAAATTCAAGCTATGCTAGGTAAGCTCAGACGGGAGAT GAAGGAAGCTGGGTATGTTCCTGATACCAATCTATCACTCTTTGATTTAG AAGATGAAGAAAAGGCTTCAGAAGTTTGGTACCATAGTGAGAAGATTGCT CTTGCTTTTGGTCTCATAGCTCTTCCTCAAGTAGTGCCCATACGGATCAC AAAAAATCTTAGGATTTGTGGAGATTGCCATAGTGCCATTAAGTTCATTT CAAGAATTGTTGGAAGAGAAATTATTGTGAGAGATAATCATCGTTTTCAT CGCTTTAAGGATGGTTGCTGCTCTTGTAAAGATTATTGGTAA
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Coding sequence (CDS) from alignment at scaffold23232:17230..19471-

>Ca_29795.1_ICC4958_v2 ID=Ca_29795.1_ICC4958_v2; Name=Ca_29795.1; organism=Cicer arietinum; type=CDS; length=2055bp; location=Sequence derived from: scaffold23232:17230..19471- (Cicer arietinum
ATGATCTTGCATCCTCAAAATCTGCTAGGAAGTTTACTTGAATCAGCTGT
TTCAACCAACAGTTCCATCCTTGGTCGTGCTGTCCATGCACACATAATTA
GGACACATGACACTCCTCTTCCATCTTTCCTCTCCAACCACCTCGTCAAC
ATGTACTCCAAACTCGACCTTCTTAACTCAGCCCAACTCGTTCTCTCACT
CACCCACCTTCCCACCGTTGTTACTTGGACCTCTCTCATCTCTGGTTGCG
TTCATAACCGTCGTTTTGTCACCGCTTTCCTTCATTTCACCAACATGCGT
CGTGACTCTGTTCACCCTAATGACTTCACTTTTCCTGGTGTTTTCAAAGC
TTCGGCTTCATTGCATATGCCCATGACTGGTAAACAAGTTCATGCACTTG
CGTTAAAGGGTGGCCAAATCTATGATGTGTTTGTAGGATGCAGTGCTTTT
GATATGTACTGCAAAACTGGCCTTCGTGTTGAAGCTCGTAACATGTTTGA
TGAAATGCCTCACAGAAACTCTGCCACGTGGAATGCTTATATTTCTAATG
CAGTTCAAGATGGCCGCTCTCTCGATGCAATTGCAGCATTCAAGGAGTTT
CTTTGTGTGCATGGACACCCGAATTCCATTACATTTTGTGCATTTCTTAA
TGCTTGTGTTGACACGTTGAGATCGAATCTCGGGCGTCAGTTACATGCAT
TTATAGTTCGATGTGGATATAAAGAGGATGTTTCGGTTGCCAATGGGCTT
ATTGACTTCTATGGAAAATGTGGAGACATTGTATCTTCTGAATTGGTTTT
TAGTAGAATTGGCAGGAAGAGGAATGTTGTTTCATGGTGCTCTATGCTTG
CTGCTCTTGTGCAAAACCATGAGGAAGAGAGGGCTTGTATGGTTTTCCTG
GAGGCAAGGAAAGAAGTTGAGCCGACAGATTTCATGATATCAAGCATGCT
CAGTGCTTGTGCTGAACTTGGAGGGCTTGAATTAGGCAGGTCAGTTCATG
CTCTAGCTGTCAAAGCATGTGTTGAGGATAATATATTTGTCGGGAGTGCA
CTTGTTGACTTGTATGGTAAATGTGGAAGTATAGAGAATGCAGAACAAGT
TTTCACTGAAATGCCTGAAAGAAACCTAGTCACATGGAATGCATTGATAG
GTGGATATGCACATCAAGGCGATGTTGGCATGGCTTTGCGTCTATTTGAG
GAGATGACATTGGGCAGCCGTGGTATGACACCGAGTTATGTGACACTAGT
TTCTGTATTGTCAGCTTGTAGTAGGGCTGGGGCAGTGGAGAGAGGCATGC
AGATATTTGAATCAATGAGATTGAACTATGGGATTGAACCAGGTGCTGAG
CATTATGCTTGTATTGTGGACCTTCTAGGGAGATCTGGTTTGGTAGACCG
TGCTTATGAATTTATTCAAAATATGCCAATGGAACCGACTATTTCAGTGT
GGGGAGCTCTACTCGGAGCTTGTAGGATGCACGGGAAAACAAAATTGGGA
AAAATTGCAGCTGAAAAGTTATTTGAGCTTGATCATGTAGACTCTGGCAA
CCATGTAGTGCTTTCTAACATGCTTGCATCTGCTGGCAGATGGGAAGAAG
CCACTATTATCAGGAAGGAAATGAAAGATATTGGCATAAAAAAGAATGTT
GGTTATAGTTGGATTGCTGTGAAGAACAGAATCCATGTTTTCCAAGCAAA
GGATAGTTCTCATGAAAGGAACACAGAAATTCAAGCTATGCTAGGTAAGC
TCAGACGGGAGATGAAGGAAGCTGGGTATGTTCCTGATACCAATCTATCA
CTCTTTGATTTAGAAGATGAAGAAAAGGCTTCAGAAGTTTGGTACCATAG
TGAGAAGATTGCTCTTGCTTTTGGTCTCATAGCTCTTCCTCAAGTAGTGC
CCATACGGATCACAAAAAATCTTAGGATTTGTGGAGATTGCCATAGTGCC
ATTAAGTTCATTTCAAGAATTGTTGGAAGAGAAATTATTGTGAGAGATAA
TCATCGTTTTCATCGCTTTAAGGATGGTTGCTGCTCTTGTAAAGATTATT
GGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_rpt
IPR032867DYW_dom
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding