Trait Overview
TraitHarvest index
Trait CategoryAnatomy and morphology trait; Yield trait
AbbreviationHI
Definition
QTLs[view all 105]
QTLs
Download Table
QTL/MTLLinkage GroupPeakStartStopDatasetMapViewer
qHI.BRB191/SEQ1027.LG10.14LG1062.360.862.8Bean-Drought_tolerance-Nabaterrega-2019View
qHI.BRB191/SEQ1027.LG10.15LG1042.339.845.8Bean-Drought_tolerance-Nabaterrega-2019View
qHI.BRB191/SEQ1027.LG10.cmbLG1041.319.845.8Bean-Drought_tolerance-Nabaterrega-2019View
qHI.BRB191/SEQ1027.LG10.cmb.2LG1062.360.863.8Bean-Drought_tolerance-Nabaterrega-2019View
qHI.ICC283xICC8261.LG6.IR.1----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC283xICC8261.LG8.RF.1----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC283xICC8261.LG8.RF.2----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC283xICC8261.LG8.RF.3----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4567xICC15614-RIL.LG1.2013bLG0142.0138.746.5Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG1.2014LG0110.714.814.5Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG1.2014.2LG0140.013542.5Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG1.2014.3LG0146.5142.548.9Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG1.combinedLG0140.013544.5Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG4.2013bLG04100.4192.4109.5Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG5.2014LG055.412.89.2Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG5.combinedLG055.412.610.9Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG6.2014LG0666.4159.973.1Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG6.combinedLG0690.7178.496.8Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG7.2014LG075.61-11.7Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4567xICC15614-RIL.LG8.2013bLG082.01-5.5Chickpea-Heat_Tolerance-Paul-2018View
qHI.ICC4958_x_ICC17163.CaLG02.2012----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG02.2013----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG03.2012----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG03.2013----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG04.2012----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG04.2013----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG05.2012----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG05.2013----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG06.2012----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG06.2013----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG07.2012----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958_x_ICC17163.CaLG07.2013----Chickpea-Transcriptome_Agronomic_Traits-Srivastava-2016-
qHI.ICC4958xICC1882.LG1.IR.1----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG1.RF.1----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG3.RF.1----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG4.IR.1----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG4.IR.2----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG4.RF.1----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG4.RF.2----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG4.RF.3----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG6.IR.1----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG8.IR.1----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG8.RF.1----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958xICC1882.LG8.RF.2----Chickpea-Drought_Tolerance-Varshney- 2014-
qHI.ICC4958_x_ICC1882-RIL.LG01.IR.1----Chickpea-QTL_Drought_Tolerance-Jaganathan-2015-
qHI.ICC4958_x_ICC1882-RIL.LG08.IR.1----Chickpea-QTL_Drought_Tolerance-Jaganathan-2015-
qHI.ICC4958_x_ICC1882-RIL.LG08.RF.1----Chickpea-QTL_Drought_Tolerance-Jaganathan-2015-
qHI.ICC4958_x_ICC1882-RIL.LG08.RF.2----Chickpea-QTL_Drought_Tolerance-Jaganathan-2015-
qHI.ICC4958_x_ICC1882-RIL.LG08.RF.3----Chickpea-QTL_Drought_Tolerance-Jaganathan-2015-
qHI.ICC4958_x_ICC1882-RIL.LG08.RF.4----Chickpea-QTL_Drought_Tolerance-Jaganathan-2015-
qHI.ICC4958_x_ICC1882-RIL.LG08.RF.5----Chickpea-QTL_Drought_Tolerance-Jaganathan-2015-
qHI.ICCV2xJG11.LG04d.C11LG04d123.31--Chickpea-Salinity_Tolerance-Pushpavalli-2015View
qHI.ICCV2xJG11.LG04d.S10LG04d48.01--Chickpea-Salinity_Tolerance-Pushpavalli-2015View
qHI.ICCV2xJG11.LG04d.S11LG04d123.31--Chickpea-Salinity_Tolerance-Pushpavalli-2015View
qHI.ICCV2xJG11.LG05.C10LG0571.31--Chickpea-Salinity_Tolerance-Pushpavalli-2015View
qHI.ICCV2xJG11.LG05.C11LG0572.31--Chickpea-Salinity_Tolerance-Pushpavalli-2015View
qHI.ICCV2xJG11.LG05.S11LG0572.31--Chickpea-Salinity_Tolerance-Pushpavalli-2015View
qHI.ICCV2xJG11.LG08.C10LG080.01--Chickpea-Salinity_Tolerance-Pushpavalli-2015View
qHI.ICCV2xJG11.LG08.C11LG083.31--Chickpea-Salinity_Tolerance-Pushpavalli-2015View
qHI.ICCV2xJG11.LG08.S11LG083.31--Chickpea-Salinity_Tolerance-Pushpavalli-2015View
qHI.ICCV2xJG62.LG2.5ESLG2--4.40000000000000036Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG4.7LCLG4--6.5Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG4.7LC.2LG4-3.56.5Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG5.5ASLG5--30.7Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG6.5ACLG6-9.6999999999999992928.1Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG6.5ASLG6-9.6999999999999992928.1Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG6.5LCLG6-9.3000000000000007128.1Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG6.5LSLG6-9.3000000000000007128.1Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG6.7LCLG6-9.3000000000000007128.1Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG6.7LSLG6-9.3000000000000007128.1Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG7.5ECLG7--1.7Chickpea-salinity-sensitivity-Vadez-2012View
qHI.ICCV2xJG62.LG7.5ESLG7--1.7Chickpea-salinity-sensitivity-Vadez-2012View
qHI.IJR/AFR298.LG05.HS16LG056154.563.5Bean-Heat_stress_response-Vargas-2021View
qHI.IJR/AFR298.LG05.HSCLG056155.563.5Bean-Heat_stress_response-Vargas-2021View
qHI.IJR/AFR298.LG05.NS17LG056361.564.5Bean-Heat_stress_response-Vargas-2021View
qHI.IJR/AFR298.LG10.NS17LG10186179.5186Bean-Heat_stress_response-Vargas-2021View
qHI.ILC588xILC3279.LG1.Breda-10----Chickpea-drought-resistant_trait-Imtiaz-2013-
qHI.ILC588xILC3279.LG1.Breda-10.2----Chickpea-drought-resistant_trait-Imtiaz-2013-
qHI.ILC588xILC3279.LG1.TH06----Chickpea-grain_yield_drought_stress-Rehman-2011-
qHI.ILC588xILC3279.LG2.TH-cont08----Chickpea-drought-resistant_trait-Imtiaz-2013-
qHI.ILC588xILC3279.LG3.TH06----Chickpea-grain_yield_drought_stress-Rehman-2011-
qHI.ILC588xILC3279.LG3.TH-cont10LG373.0999999999999943--Chickpea-drought-resistant_trait-Imtiaz-2013View
qHI.ILC588xILC3279.LG3.TH-Dr08LG373.0999999999999943--Chickpea-drought-resistant_trait-Imtiaz-2013View
qHI.ILC588xILC3279.LG3.TH-Dr10LG373.0999999999999943--Chickpea-drought-resistant_trait-Imtiaz-2013View
qHI.ILC588xILC3279.LG4.TH-Dr10LG432.4--Chickpea-drought-resistant_trait-Imtiaz-2013View
qHI.ILC588xILC3279.LG5.Breda-09----Chickpea-drought-resistant_trait-Imtiaz-2013-
qHI.ILC588xILC3279.LGU.TH-cont08----Chickpea-drought-resistant_trait-Imtiaz-2013-
qHI.PrimoxOSU442-15.LGI.HI99LGI46--Pea-Seed_yield_developmental_traits-Timmerman-2005View
qHI.PrimoxOSU442-15.LGII.HI99LGII190--Pea-Seed_yield_developmental_traits-Timmerman-2005View
qHI.PrimoxOSU442-15.LGIIIa.HI99LGIIIa190--Pea-Seed_yield_developmental_traits-Timmerman-2005View
qHI.PrimoxOSU442-15.LGIII.HI99LGIII122--Pea-Seed_yield_developmental_traits-Timmerman-2005View
qHI.Tiber/Starozagorski.LG03.2013LG0350--Bean-Drought_response-Sedlar-2020View
qHI.Tiber/Starozagorski.LG05.2013LG0544.6--Bean-Drought_response-Sedlar-2020View
qHI.Tiber/Starozagorski.LG05.2014LG0517.3--Bean-Drought_response-Sedlar-2020View
qHI.Tiber/Starozagorski.LG05.2014.2LG0531.4--Bean-Drought_response-Sedlar-2020View
qHI.Tiber/Starozagorski.LG07.2014LG07---Bean-Drought_response-Sedlar-2020View
qHI.Tiber/Starozagorski.LG09.2014LG0923--Bean-Drought_response-Sedlar-2020View
qHI.Tiga_Nicuru/DipC.LG01.DLG0152.851.854.1Bambara-Drought-Chai-2017View
qHI.Tiga_Nicuru/DipC.LG01.IRLG0154.151.858Bambara-Drought-Chai-2017View
qHI.Tiga_Nicuru/DipC.LG02.DLG0255.353.363.6Bambara-Drought-Chai-2017View
qHI.Tiga_Nicuru/DipC.LG02.IRLG0291.484.991.4Bambara-Drought-Chai-2017View
qHI.Tiga_Nicuru/DipC.LG11.DLG1127.724.730.2Bambara-Drought-Chai-2017View
qPLGHT.Pea-JI1491xCameor-RIL.LGIII.Dij08LG341.812.859.3Pea-Frost_Tolerance-Klein-2014View
qPLGHT.Pea-JI1491xCameor-RIL.LGIII.Dij09LG3180.9177.6180.9Pea-Frost_Tolerance-Klein-2014View
qPLGHT.Pea-JI1491xCameor-RIL.LGVI.Dij10LG4117.4112.5126.8Pea-Frost_Tolerance-Klein-2014View
YearPublication
2012Vadez V, Krishnamurthy L, Thudi M, Anuradha C, Colmer TD, Turner NC, Siddique KHM, Gaur PM, Varshney RK. Assessment of ICCV 2 x JG 62 chickpea progenies shows sensitivity of reproduction to salt stress and reveals QTLs for seed yield and yield components. Molecular Breeding 2012 30(1):9-21.
2005Timmerman-Vaughan G, Mills A, Whitfield C, Frew T, Butler R, Murray S, Lakeman M, McCallum J, Russell A, Wilson D. Linkage mapping of QTL for seed yield, yield components, and developmental traits in pea. Crop science. 2005; 45(4):1336-1344.
2013Hamwieh A, Imtiaz M, Malhotra RS. Multi-environment QTL analyses for drought-related traits in a recombinant inbred population of chickpea (Cicer arientinum L.). Theoretical and applied genetics. 2013; 126(4):1025-1038.
2011Rehman A, Malhotra R, Bett K, Tar'an B, Bueckert R, Warkentin T. Mapping QTL Associated with Traits Affecting Grain Yield in Chickpea (Cicer arietinum L.) under Terminal Drought Stress. Crop science. 2011; 51(2):450-463.
2015Pushpavalli R, Krishnamurthy L, Thudi M, Gaur PM, Rao MV, Siddique KH, Colmer TD, Turner NC, Varshney RK, Vadez V. Two key genomic regions harbour QTLs for salinity tolerance in ICCV 2 × JG 11 derived chickpea (Cicer arietinum L.) recombinant inbred lines. BMC plant biology. 2015; 15(1):124.
2015Jaganathan D, Thudi M, Kale S, Azam S, Roorkiwal M, Gaur PM, Kishor PBK, Nguyen H, Sutton T, Varshney RK. Genotyping-by-sequencing based intra-specific genetic map refines a ‘‘QTL-hotspot” region for drought tolerance in chickpea. Molecular genetics and genomics. 2015; 290(2):559-571.
2013Varshney RK, Thudi M, Nayak SN, Gaur PM, Kashiwagi J, Krishnamurthy L, Jaganathan D, Koppolu J, Bohra A, Tripathi S, Rathore S, Jukanti AK, Jayalakshmi V, Vemula A, Singh SJ, Yasin M, Sheshshayee MS, Viswanatha KP. Genetic dissection of drought tolerance in chickpea (Cicer arietinum L.). Theoretical Applied Genetics. 2013; 127(2):445–462.
2014Klein A, Houtin H, Rond C, Marget P, Jacquin F, Boucherot K, Huart M, Riviere N, Boutet G, Lejeune-Henaut I, Burstin J. QTL analysis of frost damage in pea suggests different mechanisms involved in frost tolerance. Theoretical and Applied Genetics. 2014; 127(6):1319-1330.
2016Srivastava R, Bajaj D, Malik A, Singh M, Parida SK. Transcriptome landscape of perennial wild Cicer microphyllum uncovers functionally relevant molecular tags regulating agronomic traits in chickpea. Scientific reports. 2016; 6:33616.
2018Paul PJ, Samineni S, Thudi M, Sajja SB, Rathore A, Das RR, Khan AW, Chaturvedi SK, Lavanya GR, Varshney RK, Gaur PM. Molecular Mapping of QTLs for Heat Tolerance in Chickpea. International journal of molecular sciences. 2018 Jul 25; 19(8).
2017Chai HH, Ho WK, Graham N, May S, Massawe F, Mayes S. A Cross-Species Gene Expression Marker-Based Genetic Map and QTL Analysis in Bambara Groundnut. Genes. 2017 Feb 22; 8(2).
2020Sedlar A, Zupin M, Maras M, Razinger J, Sustar-Vozlic J, Pipan B, Meglic V. QTL Mapping for Drought-Responsive Agronomic Traits Associated with Physiology, Phenology, and Yield in an Andean Intra-Gene Pool Common Bean Population. Agronomy. 2020; 10:225.
2019Nabateregga M, Mukankusi C, Raatz B, Edema R, Nkalubo S, Alladassi BME. Quantitative trait loci (QTL) mapping for intermittent drought tolerance in BRB 191 × SEQ 1027 Andean Intragene cross recombinant inbred line population of common bean (Phaseolus vulgaris L.).. African journal of biotechnology. 2019; 18(21).
2021Vargas Y, Mayor-Duran VM, Buendia HF, Ruiz-Guzman H, Raatz B. Physiological and genetic characterization of heat stress effects in a common bean RIL population.. PloS one. 2021; 16(4):e0249859.