PulseDB

Trait Overview

Descriptors

QTLs/MTLs

Dataset

Publications

Trait Overview

Trait	Calcium concentration
Trait Category	Biochemical; Biochemical trait
Abbreviation	CACONC
Definition	Calcium concentration in the seed
Descriptors	[view all 3]
QTLs	[view all 52]

Descriptors

Group	Descriptor
GRIN_CHICKPEA	Calcium
GRIN_LENTIL	Calcium
GRIN_PEA	Calcium

QTLs

Download Table

QTL/MTL	Linkage Group	Peak	Start	Stop	Dataset	MapViewer
qCACONC.Aragorn_x_Kiflica.LGIV.Spillman	LGIV	7	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGIV.Spillman.1	LGIV	5.4	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGIV.Whitlow	LGIV	6	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGIV.Whitlow.1	LGIV	5.4	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGVII.Spillman.1	LGVII	142.7	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGVII.Spillman.2	LGVII	208.1	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGVII.Spillman.3	LGVII	54.6	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGVII.Spillman.4	LGVII	151.9	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGVII.Whitlow.1	LGVII	150.3	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGVII.Whitlow.2	LGVII	199.4	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGVII.Whitlow.3	LGVII	54.6	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGVII.Whitlow.4	LGVII	151.3	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGV.Spillman	LGV	40.2	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGV.Spillman.1	LGV	53.4	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGV.Whitlow	LGV	40.2	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Aragorn_x_Kiflica.LGV.Whitlow.1	LGV	53.4	-	-	Pea-Mineral_Concentrations_Ma-2017	View
qCACONC.Cerinza/G10022.LG01.cot	LG01	156.8	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG01.sc	LG01	81.2	-	-	Bean-Seed_coat_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG02.cot	LG02	43.1	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG03.cot	LG03	153.5	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG04.cot	LG04	-	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG04.sc	LG04	37.9	-	-	Bean-Seed_coat_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG05.cot	LG05	29.9	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG05.cot.2	LG05	33.5	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG05.cot.3	LG05	35.3	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG06.cot	LG06	10.7	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG06.sc	LG06	10.7	-	-	Bean-Seed_coat_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG06.sc.2	LG06	46.6	-	-	Bean-Seed_coat_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG07.cot	LG07	72.2	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG07.cot.2	LG07	142.9	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG08.cot	LG08	29.5	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG08.sc	LG08	80.3	-	-	Bean-Seed_coat_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG10.sc	LG10	12	-	-	Bean-Seed_coat_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG11.cot	LG11	12	-	-	Bean-Cotyledon_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG11.sc	LG11	12	-	-	Bean-Seed_coat_micronutrients-Blair-2013	View
qCACONC.Cerinza/G10022.LG11.sc.2	LG11	45.2	-	-	Bean-Seed_coat_micronutrients-Blair-2013	View
GWAS0000176	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000177	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000178	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000179	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000180	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000181	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000182	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000183	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000184	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000185	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000186	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000187	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000188	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000189	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000190	-	-	-	-	Bean-seed_mineral_content-Nazir-2022	View
GWAS0000504	-	-	-	-	Chickpea-Nutritional_traits-Roorkiwal-2022	View


Dataset	Type
Pea.Mineral.Grusak.2002	phenotype
CHICKPEA.MINERALS.2006.GRUSAK	phenotype
LENTIL.MINERALS.2009.GRUSAK	phenotype


Year	Publication
2022	Nazir M, Mahajan R, Mansoor S, Rasool S, Mir RA, Singh R, Thakral V, Kumar V, Sofi PA, El-Serehy HA, Hefft DI, Zargar SM. Identification of QTLs/ Candidate Genes for Seed Mineral Contents in Common Bean (Phaseolus vulgaris L.) Through Genotyping-by-Sequencing.. Frontiers in genetics. 2022; 13:750814.
2022	Roorkiwal M, Bhandari A, Barmukh R, Bajaj P, Valluri VK, Chitikineni A, Pandey S, Chellapilla B, Siddique KHM, Varshney RK. Genome-wide association mapping of nutritional traits for designing superior chickpea varieties.. Frontiers in plant science. 2022; 13:843911.
2017	Ma Y, Coyne CJ, Grusak MA, Mazourek M, Cheng P, Main D, McGee RJ. Genome-wide SNP identification, linkage map construction and QTL mapping for seed mineral concentrations and contents in pea (Pisum sativum L.). BMC plant biology. 2017 Feb 13; 17(1):43.
2013	Blair MW, Izquierdo P, Astudillo C, Grusak MA. A legume biofortification quandary: variability and genetic control of seed coat micronutrient accumulation in common beans. Frontiers in plant science. 2013; 4:275.

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