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Marker Overview
| Name | Vu_UCR09-1_0074 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | G |
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| 5' Flanking Sequence | CTGTAATAACCACACATTCCATTGTTATATAACAATCAAAGTATCAAAGAAGAGAGAGCA
CAATAACAGTGAGAGTGTGAAATGGATCAGTTGGTGTGGAGGGTGTTGCCTTTGCTAACA
ATCCTTGTTTCCTTTTTCTTATTCTTCTACTTCCAGAATTCACACACGGCGCAGTTATAT
CCTCTCATAAAGTTGCCACGGAGTAAATGCAGCCTTCTTCCCCATCACCACTTCTGGATA
TCCAGCAAACGCATCGTGACTCCACAGGGGATCATTTCTGGTTCAGTGGAGATAAATGAA
GGGAGAATAGTATCTGTGGTTGAGGGATATGGGAATCAGGGGCAGTCCAAGCAAGAAGAA
ATAATAGATTATGGAGATGCTGTTGTTATGCCTGGCCTGATTGATGTGCACGTACATCTT
GATGAACCGGGAAGAACTGAGTGGGAAGGATTTGATACCGGTACCAGAGCTGCTGCTGCT
GGTGGAGTAACCACAGTGGTTGACATGCCTCTAAACAATTACCCTACAACCGTGTCTAAG
GAGACGCTGAAACTTAAGCTTGACGCTGCAGAGGATAAAATCTATGTTGATGTTGGATTT
TGGGGAGGCCTAGTCCCTGAAAATGCCCTTAATCTAACTATTCTTGACGATCTCTTGAGT
GCTGGTGTTCTCGGTGTGAAGTCTTTTATGTGTCCTTCAGGAATTGATGACTTTCCTATG
ACAACTATTGACCATATCAAGGCGGGATTGTCTGTGTTGGCAAAATATAAAAGACCTATA
GTTGTGCATTCTGAGCTTCAACAAGATTATGGCAATGATTTGGTGCATGATGATAACCGT
GATCCACATGATTATTTGACCTATCTCAACACCAGACCACCTTCATGGGAGGAGGCAGCC
ATTAGACAACTTGTAGGTGTTTCGAAGGACACTGGAATTGGTGGTCCTTTAGAAGGAGCA
CATATCCACATTGTCCACTTGTCTGATTCAAGTGCTTCCTTAGATCTGATTAAGGAAGCA
AAAAGTCGAGGTGATAGCATAAGCGTTGAGACTTGTCCTCATTACCTTGCTTTCACCTCT
GAAGAGATACCAAATGGGGATACTCGTTATAAGTGTTCCCCACCCATTCGTGATGCACAA
AACAAAGACAAATTATGGGAGGCTGTATTGGAGGGACACATTGACCTGTTAACAACTGAT
CATTCACCAACCGTGCCTGAACTCAAGCTTCTTGAGGAGGGTGACTTCTTGAAGGCTTGG
GGGGGCATATCATCTTTGCAGTTTAATCTTCCGGTGACGTGGTCTTACGGGAAGAAATAT
GGACTAACTATAGAACAGTTGTCGTTATTGTGGAGCAAGAGACCTGCAGCACTTGCGGGG
ATAGAATCAAAGGGGACTATTGCAGTTGGAAACCATGCAGATATTGTAGTTTGGCAACCA
GAGGAGGAGTTCGACCTGGATGACAATTATCCTGTTTTCATTAAACATTACGAACTCTCT
GCTTACATGGGAAGTAGGTTATCAGGAAAAGTTCTGGACACTTATGTGAGAG |
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| 3' Flanking Sequence | AAATCTTGTGTTTAAGGATGGGAAGCATGCTCCTGCAGCCTGTGGTGTTCAAATTCTAGC
CACATGAATCAGTTAAATATTGGTACCTTTCAGATGCAAGTTTCAGTGGGGCCATAAATA
AGAGATGGAAGTAGCTGCTGGCATCGGCCATTGTTGAGCAAGCATTTTCCTTCTCATAGA
ATAGTGCGTTTGCATGTATTATATCCGTTTGGATGTTTTGGATAATGAAATAATATTCTA
CTTTTCTATAATGTAGATTACAACTTTGCACAAAAAAAAAAAAAAAAAAAAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0074 ID=Vu_UCR09-1_0074; Name=Vu_UCR09-1_0074; organism=Vigna unguiculata; type=genetic_marker; length=1849bp
CTGTAATAACCACACATTCCATTGTTATATAACAATCAAAGTATCAAAGA
AGAGAGAGCACAATAACAGTGAGAGTGTGAAATGGATCAGTTGGTGTGGA
GGGTGTTGCCTTTGCTAACAATCCTTGTTTCCTTTTTCTTATTCTTCTAC
TTCCAGAATTCACACACGGCGCAGTTATATCCTCTCATAAAGTTGCCACG
GAGTAAATGCAGCCTTCTTCCCCATCACCACTTCTGGATATCCAGCAAAC
GCATCGTGACTCCACAGGGGATCATTTCTGGTTCAGTGGAGATAAATGAA
GGGAGAATAGTATCTGTGGTTGAGGGATATGGGAATCAGGGGCAGTCCAA
GCAAGAAGAAATAATAGATTATGGAGATGCTGTTGTTATGCCTGGCCTGA
TTGATGTGCACGTACATCTTGATGAACCGGGAAGAACTGAGTGGGAAGGA
TTTGATACCGGTACCAGAGCTGCTGCTGCTGGTGGAGTAACCACAGTGGT
TGACATGCCTCTAAACAATTACCCTACAACCGTGTCTAAGGAGACGCTGA
AACTTAAGCTTGACGCTGCAGAGGATAAAATCTATGTTGATGTTGGATTT
TGGGGAGGCCTAGTCCCTGAAAATGCCCTTAATCTAACTATTCTTGACGA
TCTCTTGAGTGCTGGTGTTCTCGGTGTGAAGTCTTTTATGTGTCCTTCAG
GAATTGATGACTTTCCTATGACAACTATTGACCATATCAAGGCGGGATTG
TCTGTGTTGGCAAAATATAAAAGACCTATAGTTGTGCATTCTGAGCTTCA
ACAAGATTATGGCAATGATTTGGTGCATGATGATAACCGTGATCCACATG
ATTATTTGACCTATCTCAACACCAGACCACCTTCATGGGAGGAGGCAGCC
ATTAGACAACTTGTAGGTGTTTCGAAGGACACTGGAATTGGTGGTCCTTT
AGAAGGAGCACATATCCACATTGTCCACTTGTCTGATTCAAGTGCTTCCT
TAGATCTGATTAAGGAAGCAAAAAGTCGAGGTGATAGCATAAGCGTTGAG
ACTTGTCCTCATTACCTTGCTTTCACCTCTGAAGAGATACCAAATGGGGA
TACTCGTTATAAGTGTTCCCCACCCATTCGTGATGCACAAAACAAAGACA
AATTATGGGAGGCTGTATTGGAGGGACACATTGACCTGTTAACAACTGAT
CATTCACCAACCGTGCCTGAACTCAAGCTTCTTGAGGAGGGTGACTTCTT
GAAGGCTTGGGGGGGCATATCATCTTTGCAGTTTAATCTTCCGGTGACGT
GGTCTTACGGGAAGAAATATGGACTAACTATAGAACAGTTGTCGTTATTG
TGGAGCAAGAGACCTGCAGCACTTGCGGGGATAGAATCAAAGGGGACTAT
TGCAGTTGGAAACCATGCAGATATTGTAGTTTGGCAACCAGAGGAGGAGT
TCGACCTGGATGACAATTATCCTGTTTTCATTAAACATTACGAACTCTCT
GCTTACATGGGAAGTAGGTTATCAGGAAAAGTTCTGGACACTTATGTGAG
AG[G]AAATCTTGTGTTTAAGGATGGGAAGCATGCTCCTGCAGCCTGTGG
TGTTCAAATTCTAGCCACATGAATCAGTTAAATATTGGTACCTTTCAGAT
GCAAGTTTCAGTGGGGCCATAAATAAGAGATGGAAGTAGCTGCTGGCATC
GGCCATTGTTGAGCAAGCATTTTCCTTCTCATAGAATAGTGCGTTTGCAT
GTATTATATCCGTTTGGATGTTTTGGATAATGAAATAATATTCTACTTTT
CTATAATGTAGATTACAACTTTGCACAAAAAAAAAAAAAAAAAAAAAAA
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