Vigna angularis Jingnong 6 genome v1.1

Genome Overview


Analysis Name	Vigna angularis Jingnong 6 genome v1.1
Method	Illumina HiSeq 2000, SOAP denovo (SSPACE-V1.1, GapCloser)
Source	NCBI
Date performed	2020-05-19

This assembly and genome were downloaded from NCBI, BioProject PRJNA328963 (GCA_001190045.1). This genome was submitted to NCBI by Beijing University of Agriculture and published in Yang et al. 2015.

About the assembly (from Yang et al):

Total size of assembled contigs	449.8 Mb
Number of contigs (>500 bp)	25,426
Largest contig	263,950 bp
N50 contig length	38,355 bp
Number of scaffolds (>500 bp)	5,590
Total size of assembled scaffolds	466.7 Mb
N50 scaffold length	1,292,063 bp
Longest scaffold	5,416,319 bp
Number of gene models	34,183

Download

V. angularis Jingnong 6, Genome Assembly v1.1 Files:

Please see the PCD Data Repository, or click on links below.

Chromosomes and scaffolds [Fasta Format]
mRNA and CDS [GFF Format] [Fasta Format]
Peptides [Fasta Format]

Homology Analysis Results:

Homology Analysis: V. angularis Jingnong 6 v1.1 Proteins vs. Swissprot
Homology Analysis: V. angularis Jingnong 6 v1.1 Proteins vs. TrEMBL

Links

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BLAST

PathwayCyc

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Vigna angularis Jingnong 6 genome v1.1