Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
The genome of elite breeding line A147 (also known as Xiabao II) was sequenced and assembled as outlined in Pan L, Liu M, Kang Y, Mei X, Hu G, Bao C, Zheng Y, Zhao H, Chen C, Wang N. Comprehensive genomic analyses of Vigna unguiculata provide insights into population differentiation and the genetic basis of key agricultural traits. Plant biotechnology journal. 2023 Mar 25.
About the assembly:
Functional annotation files for the Vigna unguiculata subsp. sesquipedalis A147 genome v1.0 are available for download below. The Vigna unguiculata subsp. sesquipedalis A147 genome v1.0 proteins were analyzed using InterProScan in order to assign InterPro domains and Gene Ontology (GO) terms. Pathways analysis was performed using the KEGG Automatic Annotation Server (KAAS).
The Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0 assembly file is available in FASTA format.
The Vigna unguiculata subsp. sesquipedalis line A147 v1.0 genome gene prediction files are available in GFF3 and FASTA format.
Homology of the Vigna unguiculata subsp. sesquipedalis A147 genome v1.0 proteins was determined by pairwise sequence comparison using the blastp algorithm against various protein databases. An expectation value cutoff less than 1e-6 for the Arabidoposis proteins (Araport11), UniProtKB/SwissProt (Release 2021-09), and UniProtKB/TrEMBL (Release 2021-09) databases. The best hit reports are available for download in Excel format.