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Genome Overview
| Analysis Name | Vigna radiata cv. VC1973A genome v6.0 |
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| Method | Illumina, GS FLX+ (Assembly with ALLPATHS-LG, Newbler 2.5.3) |
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| Source | NCBI GCA_000741045.2 |
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| Date performed | 2023-06-13 |
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The genome was sequenced and assembled as outlined in Kang YJ, Kim SK, Kim MY, Lestari P, Kim KH, Ha BK, Jun TH, Hwang WJ, Lee T, Lee J, Shim S, Yoon MY, Jang YE, Han KS, Taeprayoon P, Yoon N, Somta P, Tanya P, Kim KS, Gwag JG, Moon JK, Lee YH, Park BS, Bombarely A, Doyle JJ, Jackson SA, Schafleitner R, Srinives P, Varshney RK, Lee SH. Genome sequence of mungbean and insights into evolution within Vigna species. Nature communications. 2014 Nov 11; 5:5443.
About the assembly:
| Number of scaffolds |
2,499 |
| Total size |
464 Mb |
| N50 |
25,360,630 bp |
| Assembly BUSCO score (embryophyta_odb10) |
98.2% |
| Annotation BUSCO score (embryophyta_odb10) |
99.3% |
Assembly
The Vigna radiata VC1973A genome v1.0 assembly file is available in FASTA format.
Downloads
| Chromosomes and scaffolds (FASTA file) |
Vr_VC1973A_v1.0.fasta.gz |
Gene Prediction
The Vigna radiata VC1973A v1.0 genome gene prediction files are available in GFF3 and FASTA format.
Downloads
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