Expression: Soaked dry beans gene expression profiling

Overview
Analysis NameExpression: Soaked dry beans gene expression profiling
MethodTag-Seq, 3'Quant-seq (HiSat2, HTSeq, DESeq2)
SourcePRJNA865866
Date performed2023-09-13

This data is from the following manuscript: Jeffery HR, Mudukuti N, Buell CR, Childs KL, Cichy K. Gene expression profiling of soaked dry beans (Phaseolus vulgaris L.) reveals cell wall modification plays a role in cooking time. The plant genome. 2023 Jul 06; e20364.  NCBI BioProject PRJNA865866.  There are 3 replications of each sample which were merged during the analysis, only the first replicate accession numbers are listed for each treatment.  Expression values are average transcript count.

 

Sample Cultivar Tissue Treatment
TZ-37_0v3 TZ-37 Mature seed 3 hours of soaking in distilled water
TZ-37_0v6 TZ-37 Mature seed 6 hours of soaking in distilled water
TZ-37_0v12 TZ-37 Mature seed 12 hours of soaking in distilled water
TZ-37_0v18 TZ-37 Mature seed 18 hours of soaking in distilled water
TZ-27_0v3 TZ-27 Mature seed 3 hours of soaking in distilled water
TZ-27_0v6 TZ-27 Mature seed 6 hours of soaking in distilled water
TZ-27_0v12 TZ-27 Mature seed 12 hours of soaking in distilled water
TZ-27_0v18 TZ-27 Mature seed 18 hours of soaking in distilled water
Ervilha_0v3 Ervilha Mature seed 3 hours of soaking in distilled water
Ervilha_0v6 Ervilha Mature seed 6 hours of soaking in distilled water
Ervilha_0v12 Ervilha Mature seed 12 hours of soaking in distilled water
Ervilha_0v18 Ervilha Mature seed 18 hours of soaking in distilled water
PI527538_0v3 PI527538 Mature seed 3 hours of soaking in distilled water
PI527538_0v6 PI527538 Mature seed 6 hours of soaking in distilled water
PI527538_0v12 PI527538 Mature seed 12 hours of soaking in distilled water
PI527538_0v18 PI527538 Mature seed 18 hours of soaking in distilled water
Properties
Additional information about this analysis:
Property NameValue
Data source filepublic://expression/650340b4e2d71_Ervilha_0v3.txt