Expression: Soaked dry beans gene expression profiling

Overview


Analysis Name	Expression: Soaked dry beans gene expression profiling
Method	Tag-Seq, 3'Quant-seq (HiSat2, HTSeq, DESeq2)
Source	PRJNA865866
Date performed	2023-09-13

This data is from the following manuscript: Jeffery HR, Mudukuti N, Buell CR, Childs KL, Cichy K. Gene expression profiling of soaked dry beans (Phaseolus vulgaris L.) reveals cell wall modification plays a role in cooking time. The plant genome. 2023 Jul 06; e20364. NCBI BioProject PRJNA865866. There are 3 replications of each sample which were merged during the analysis, only the first replicate accession numbers are listed for each treatment. Expression values are average transcript count.

Sample	Cultivar	Tissue	Treatment
TZ-37_0v3	TZ-37	Mature seed	3 hours of soaking in distilled water
TZ-37_0v6	TZ-37	Mature seed	6 hours of soaking in distilled water
TZ-37_0v12	TZ-37	Mature seed	12 hours of soaking in distilled water
TZ-37_0v18	TZ-37	Mature seed	18 hours of soaking in distilled water
TZ-27_0v3	TZ-27	Mature seed	3 hours of soaking in distilled water
TZ-27_0v6	TZ-27	Mature seed	6 hours of soaking in distilled water
TZ-27_0v12	TZ-27	Mature seed	12 hours of soaking in distilled water
TZ-27_0v18	TZ-27	Mature seed	18 hours of soaking in distilled water
Ervilha_0v3	Ervilha	Mature seed	3 hours of soaking in distilled water
Ervilha_0v6	Ervilha	Mature seed	6 hours of soaking in distilled water
Ervilha_0v12	Ervilha	Mature seed	12 hours of soaking in distilled water
Ervilha_0v18	Ervilha	Mature seed	18 hours of soaking in distilled water
PI527538_0v3	PI527538	Mature seed	3 hours of soaking in distilled water
PI527538_0v6	PI527538	Mature seed	6 hours of soaking in distilled water
PI527538_0v12	PI527538	Mature seed	12 hours of soaking in distilled water
PI527538_0v18	PI527538	Mature seed	18 hours of soaking in distilled water

Properties

Additional information about this analysis:


Property Name	Value
Data source file	public://expression/650340b4e2d71_Ervilha_0v3.txt

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