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Genome Overview
| Analysis Name | Vigna angularis cv. Shumari genome v1.a1 |
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| Method | Illumina, PacBio (Assembly with Celera, Quiver) |
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| Source | VIGGS |
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| Date performed | 2024-06-27 |
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The genome was sequenced and assembled as outlined in Sakai H, Naito K, Ogiso-Tanaka E, Takahashi Y, Iseki K, Muto C, Satou K, Teruya K, Shiroma A, Shimoji M, Hirano T, Itoh T, Kaga A, Tomooka N. The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome. Scientific reports. 2015 Nov 30; 5:16780.
About the assembly:
| Number of scaffolds |
2,261 |
| Total size |
522 Mb |
| N50 |
38,860,970 bp |
| Assembly BUSCO score (embryophyta_odb10) |
97.6% |
| Annotation BUSCO score (embryophyta_odb10) |
94.2% |
Assembly
The Vigna angularis cv. Shumari genome v1.0 assembly file is available in FASTA format.
Downloads
| Chromosomes and scaffolds (FASTA file) |
Va_Shumari_v1.0.fasta.gz |
Gene Prediction
The Vigna angularis cv. Shumari genome v1.a1 gene prediction files are available in GFF3 and FASTA format.
Downloads
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