CED_G002 | PulseDB

Marker Overview

Marker Overview


Name	CED_G002
Genbank ID	N/A
Type	SSR
Species	Vigna angularis
Repeat Motif	(AG)16
Primer 1	CED_G002.Forward: AACTGGACCTGTACCACTGG
Primer 2	CED_G002.Reverse: TACAGCCTTCTTGCACCATG
Publication	[view all]
Contact	Peerasak Srinives

Contact

Name

Details

Peerasak Srinives

First name:	Peerasak
Last name:	Srinives
Institution:	Kasetsart University
Country:	Thailand
Email:	agrpss@yahoo.com
Last update:	Jan 2012

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr04	supercontig	Chr04:26714314..26714456 .
chr01	chromosome	chr01:27083009..27083144 .
Chr_10-CM003380.1	supercontig	Chr_10-CM003380.1:18253468..18253615 .
Chr04_WLD	supercontig	Chr04_WLD:30041752..30041932 .

Publications


Year	Publication
2012	Kongjaimun A, Kaga A, Tomooka N, Somta P, Shimizu T, Shu Y, Isemura T, Vaughan DA, Srinives P. An SSR-based linkage map of yardlong bean (Vigna unguiculata (L.) Walp. subsp. unguiculata Sesquipedalis Group) and QTL analysis of pod length. Genome. 2012 Feb; 55(2):81-92.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cowpea-JP81610/JP89083-BC1F1	LG11	N/A	37.3	CEDG002	View
2	Cowpea-JP81610/JP89083-F2	LG11	N/A	25.8	CEDG002	View
3	Vigna-TN67/ICPMO_056-F2	LG11	N/A	9.6	CEDG002	View
4	Mungbean-JP211874/JP229096-BC1F1	LG11	N/A	16.2	CEDG002	View
5	Vigna-IPCMO056/TN67-F2	LG11	N/A	9.6	CEDG002	View