Cicer_arietinum_v1_Contig100

Contig Overview
NameCicer_arietinum_v1_Contig100
Unique NameCicer_arietinum_v1_Contig100
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length513
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
HO664334ESTHO664334:34..456 +Cicer arietinum unigene v1n/a
HO062827ESTHO062827:1..513 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO664334HO664334Cicer arietinumEST
HO062827HO062827Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Match: C6T1P6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.258e-26
Identity = 59/88 (67.05%), Postives = 65/88 (73.86%), Query Frame = -3 
Query:  119 PKPKDSLSEHDVKSPNFLERAKEEIEAVFNHDKVPHHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKESNDSPK 382
            PKPKDS SE DVKSPN  ERAKEEIEAVF+HDK PHHHKETHG +DDID GTS +E+KAP VFERVK         + PKKES    +
Sbjct:    6 PKPKDSPSEKDVKSPNIFERAKEEIEAVFHHDKSPHHHKETHGTSDDIDEGTSPDEIKAPGVFERVKEEIEAVAEAVHPKKESESDTR 93
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Match: C6T491_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.983e-24
Identity = 57/88 (64.77%), Postives = 63/88 (71.59%), Query Frame = -3 
Query:  119 PKPKDSLSEHDVKSPNFLERAKEEIEAVFNHDKVPHHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKESNDSPK 382
            PKPKDS SE  VK+PN  ERAKEEIEAVF+ DK PHHHKETHG +DDID GTS +E+KAP VFERVK         I PKKES    +
Sbjct:    6 PKPKDSPSEKKVKTPNIFERAKEEIEAVFHRDKSPHHHKETHGTSDDIDEGTSPDEIKAPGVFERVKEEIEAVAEAIHPKKESESGTR 93
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Match: B9HDY0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1080847 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.992e-16
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = -3 
Query:  125 SEHDVKS--PNFLERAKEEIEAVFNHDKVP-HHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKESNDS 361
            +E+DVK+  PN +ERAKEEIEA+ +H K P HHH ETHGRNDDID  T +++VK PSVF+R K         I  KKES++S
Sbjct:   52 AENDVKAKAPNLIERAKEEIEAIIHHGKSPVHHHIETHGRNDDIDDSTPIDQVKGPSVFQRAKEEVEALVQTIHRKKESSNS 133
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Match: A9PHC0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645311 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.992e-16
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = -3 
Query:  128 PKPKDSLSEHDVKSPNFLERAKEEIEAVFNHDKVPHHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKESND 382
            P P +   E DVK+PN +E +KEEIEA+ +  K P H+KETHGR+DDID  T ++EVK PSVFER+K         I PKK+ +D
Sbjct:   11 PSPSE---EKDVKAPNVIEISKEEIEAIVHGGKSPRHYKETHGRSDDIDEDTPIDEVKGPSVFERIKEEIEALVGAIHPKKDKSD 92
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Match: D7TZW2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016802001 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.529e-15
Identity = 47/86 (54.65%), Postives = 53/86 (61.63%), Query Frame = -3 
Query:  134 NGTPKPKDSLSEHDVKSPNFLERAKEEIEAVFNHDKVPHHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKES 391
            N  P   DS  E  VK PN +ERAKEEI+AV +    P H KETHG +DDID  T ++EVK PSVFERVK         I PKKES
Sbjct:    3 NTNPDHTDSPLEKGVKEPNLIERAKEEIKAVISS---PRHDKETHGTSDDIDEDTPIDEVKGPSVFERVKEEVEAIVEAIHPKKES 85
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Match: D7TCN3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015179001 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.374e-14
Identity = 44/82 (53.66%), Postives = 50/82 (60.98%), Query Frame = -3 
Query:  137 PKPKDSLSEHDVKSPNFLERAKEEIEAVFNHDKVPHHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKE 382
            P P D      VK+PN +ER KEEIEAV + +K  HHHKETHG  DDID  T + EVKAP+VFER K         I  KKE
Sbjct:    5 PPPPDKY----VKNPNSMERTKEEIEAVLHTEKSSHHHKETHGMRDDIDEKTPLNEVKAPNVFERAKEEIEALVQTIHSKKE 82

HSP 2 Score: 71.2478 bits (173), Expect = 3.867e-11
Identity = 49/131 (37.40%), Postives = 60/131 (45.80%), Query Frame = -3 
Query:  134 TKKYYRFIAITSKFKRCSDHINGRNGTPKPKDSLSEHDVKSPNFLERAKEEIEAVFNH---------------------DKVPHHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKES 463
            TK+    +  T K        +G       K  L+E  VK+PN  ERAKEEIEA+                        +K PHH KETHG  +DID  T + +VKAP+VFER K         I PKKES
Sbjct:   21 TKEEIEAVLHTEKSSHHHKETHGMRDDIDEKTPLNE--VKAPNVFERAKEEIEALVQTIHSKKEPELHVTTSNNEMLPTEKSPHHFKETHGMREDIDENTPMNDVKAPNVFERAKEEIEALVQTIHPKKES 149
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Match: B9RK84_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1047200 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.047e-13
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = -3 
Query:  131 SPNFLERAKEEIEAVFNHDKVPHHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKESN 343
            S + +ERAKEEIE + +HDK PHH+KET+GRNDDI+  T ++E+K P +F+R K         I PKKE++
Sbjct:  104 SVSLIERAKEEIETIIHHDKTPHHYKETYGRNDDIE-ETPIDEIKGPGMFQRAKEEIEAIVEAIHPKKETS 173

HSP 2 Score: 64.6994 bits (156), Expect = 3.619e-9
Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = -3 
Query:  182 DSLSEHDVKSPNFLERAKEEIEAVFN-HDKVPHHHKETHGRNDDIDGGTSVEEVKAPSVFERVK 370
            + +++ +VK+PN  ERAKEEI+AV +   K+  HHKETHG + DID  T ++ V+AP+VFER K
Sbjct:    4 NGVADENVKAPNIFERAKEEIQAVIHTTGKLHLHHKETHG-SSDIDENTPLDAVRAPNVFERAK 66
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Match: B9H336_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555890 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.202e-12
Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = -3 
Query:  128 GTPKPKDSLSEHDVKS-PNFLERAKEEIEAVFNHDKVPHHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKESND 388
            G PK   S +E DVK+ PN +E+   E+EA+ +  K PHHH+ETHGR+DDID  T ++E+K P VF R+K         I  KK+ +D
Sbjct:    6 GDPKSPSSSAEKDVKAEPNVMEK---ELEAMTHSGKSPHHHQETHGRSDDIDEDTPIDEIKGPGVFGRIKEEIEALVGAIHSKKDKSD 90
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Match: A9PD35_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.791e-12
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = -3 
Query:  128 GTPKPKDSLSEHDVKS-PNFLERAKEEIEAVFNHDKVPHHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKESND 388
            G PK   S SE DVK+ PN +E+   E+EA+ +  K PHHH+ETHGR+DDID  T ++E+K P VF R+K         I  KK+ +D
Sbjct:    6 GDPKSPSS-SEKDVKAEPNVMEK---ELEAMTHSGKSPHHHQETHGRSDDIDEDTPIDEIKGPGVFGRIKEEVEALVGAIHSKKDKSD 89
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Match: Q9LTS1_ARATH (At5g57000 OS=Arabidopsis thaliana GN=At5g57000 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.736e-11
Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = -3 
Query:  128 KDSLSEHDVKSPNFLERAKEEIEAVFNHDKVP----HHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKESND 373
            K    E   K PN L++A+E+++++F  +K P    HHHKETHGR+DDI   T V+EVKAP+V ER K         I  KK+  D
Sbjct:   61 KSDKPEDGKKKPNMLKKAREDLKSLFLKEKPPRHLHHHHKETHGRSDDISENTPVDEVKAPNVLERAKEEIEAVIDTIHSKKKEKD 146
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TAIR peptide
Match: AT5G57000.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | chr5:23063870-23065203 REVERSE LENGTH=187)

HSP 1 Score: 72.4034 bits (176), Expect = 1.533e-13
Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = -3 
Query:  128 KDSLSEHDVKSPNFLERAKEEIEAVFNHDKVP----HHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKESND 373
            K    E   K PN L++A+E+++++F  +K P    HHHKETHGR+DDI   T V+EVKAP+V ER K         I  KK+  D
Sbjct:   61 KSDKPEDGKKKPNMLKKAREDLKSLFLKEKPPRHLHHHHKETHGRSDDISENTPVDEVKAPNVLERAKEEIEAVIDTIHSKKKEKD 146
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TAIR peptide
Match: AT1G72690.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17490.1); Has 59 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:27361223-27361745 FORWARD LENGTH=87)

HSP 1 Score: 72.4034 bits (176), Expect = 1.533e-13
Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = -3 
Query:  134 EHDVKSPNFLERAKEEIEAVFNHDKVP--HHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKES 358
            E  VKSPN  ER KEEIEA+ +H+K    HH KETHG +DDID  T ++ VK P  F+R+K         + PK+ S
Sbjct:    9 EKTVKSPNVFERVKEEIEAMGHHEKSKSRHHDKETHGTSDDIDESTPIDYVKGPGFFQRLKEEIEAIFNAVTPKRSS 85
[Close]
BLAST of Cicer_arietinum_v1_Contig100 vs. TAIR peptide
Match: AT5G57000.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 141 Blast hits to 104 proteins in 24 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 8; Plants - 82; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | chr5:23063870-23065203 REVERSE LENGTH=186)

HSP 1 Score: 71.2478 bits (173), Expect = 3.415e-13
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = -3 
Query:  128 KSPNFLERAKEEIEAVFNHDKVP----HHHKETHGRNDDIDGGTSVEEVKAPSVFERVKXXXXXXXXXILPKKESND 346
            K PN L++A+E+++++F  +K P    HHHKETHGR+DDI   T V+EVKAP+V ER K         I  KK+  D
Sbjct:   69 KKPNMLKKAREDLKSLFLKEKPPRHLHHHHKETHGRSDDISENTPVDEVKAPNVLERAKEEIEAVIDTIHSKKKEKD 145
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig100 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T1P6_SOYBN3.258e-2667.05Putative uncharacterized protein OS=Glycine max PE... [more]
C6T491_SOYBN3.983e-2464.77Putative uncharacterized protein OS=Glycine max PE... [more]
B9HDY0_POPTR3.992e-1656.10Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PHC0_POPTR3.992e-1651.76Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TZW2_VITVI7.529e-1554.65Whole genome shotgun sequence of line PN40024, sca... [more]
D7TCN3_VITVI6.374e-1453.66Whole genome shotgun sequence of line PN40024, sca... [more]
B9RK84_RICCO7.047e-1350.70Putative uncharacterized protein OS=Ricinus commun... [more]
B9H336_POPTR1.202e-1245.45Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PD35_POPTR7.791e-1246.59Putative uncharacterized protein OS=Populus tricho... [more]
Q9LTS1_ARATH1.736e-1144.19At5g57000 OS=Arabidopsis thaliana GN=At5g57000 PE=... [more]
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BLAST of Cicer_arietinum_v1_Contig100 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G57000.11.533e-1344.19| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT1G72690.11.533e-1348.05| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT5G57000.23.415e-1346.75| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 62..74
score
NoneNo IPR availableSEGsegsegcoord: 9..29
score
NoneNo IPR availableSEGsegsegcoord: 100..109
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig100 ID=Cicer_arietinum_v1_Contig100; Name=Cicer_arietinum_v1_Contig100; organism=Cicer arietinum; type=contig; length=513bp
AAAACAAAAGCAAAACATAGTAGTTTTGATGGTTAAAANTGTTAAGATAC
AAAGCTTGACACTCTTTATTACAAAATAATAAAAAGGTACACGCTAGCTA
GTTTATTAATAGGAATCACTTTGGGGAGTCATTAGATTCTTTCTTTGGAA
GAATGGCCTCAACCACAGCTTCAATTTCCTCTTTCACCCTTTCAAACACA
CTGGGAGCTTTGACTTCTTCAACAGAAGTTCCCCCATCAATGTCATCATT
TCTACCATGAGTTTCTTTGTGATGGTGAGGCACTTTGTCGTGATTAAAAA
CAGCCTCAATCTCCTCCTTAGCTCGCTCAAGAAAGTTTGGAGATTTCACA
TCATGTTCTGAAAGCGAATCTTTTGGTTTGGGGGTCCCATTTCTGCCATT
GATGTGATCCGAACAACGTTTGAATTTTGAGGTTATTGCAATGAAACGAT
AGTATTTTTTTGTGTGTAAGTTAGATATTTACTCTTCCTAATCCTCCCCC
GCGTACCTGCCCG
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