Cicer_arietinum_v1_Contig1006

Contig Overview
NameCicer_arietinum_v1_Contig1006
Unique NameCicer_arietinum_v1_Contig1006
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length352
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR911777ESTGR911777:1..328 +Cicer arietinum unigene v1n/a
GR912172ESTGR912172:15..352 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR911777GR911777Cicer arietinumEST
GR912172GR912172Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig1006 vs. TrEMBL
Match: C6T0J1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.513e-20
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 3 
Query:   12 RAAARTGTSHQKQQCNDRHRKLSLKVRESDSTDTFVIPASLKVDHDDCKYPGDPSIFSSSDVPSLTNMVMCR 227
            R   R+  S+QK +C D H+K S  V +S++ D+F+IPASLKVDHDDCKY GDPSIFSSS VPSLTNMVMCR
Sbjct:  163 RKRGRSSASYQKPRCTDTHQKRSPNVMKSNAPDSFLIPASLKVDHDDCKYVGDPSIFSSSVVPSLTNMVMCR 234
[Close]
BLAST of Cicer_arietinum_v1_Contig1006 vs. TrEMBL
Match: A5B418_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000033 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.430e-7
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 3 
Query:   27 TGTSHQKQQCNDRHRKLSLKVRESDSTDTFVIPASLKVDHDDCKYPGDPSIFSSSDVPSLTNMVMCR 227
            +G S QK   N    K + ++  S + D F IP SLKVD ++CKY GD S+FSSS VP LTN+VM R
Sbjct:  604 SGGSVQKLHVNVNTSKSASEIMGSHACDRFFIPKSLKVDCENCKYVGD-SLFSSSVVPPLTNLVMSR 669
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1006 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
C6T0J1_SOYBN2.513e-2066.67Putative uncharacterized protein OS=Glycine max PE... [more]
A5B418_VITVI1.430e-750.75Putative uncharacterized protein OS=Vitis vinifera... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1006 ID=Cicer_arietinum_v1_Contig1006; Name=Cicer_arietinum_v1_Contig1006; organism=Cicer arietinum; type=contig; length=352bp
ACTAGTGACTTCGAGCGGCCGCCCGGACAGGTACCTCTCACCAGAAGCAA
CAGTGCAATGACAGACACAGGAAATTGTCCCTAAAGGTTCGGGAGTCAGA
TTCTACTGATACTTTTGTGATTCCAGCTTCATTGAAAGTTGACCATGATG
ACTGCAAATACCCAGGAGATCCATCTATTTTCAGTTCCTCGGACGTGCCA
TCTTTAACTAACATGGTTATGTGTAGGTGACTCCATGTTGTTTTCTATAG
AATGGTGTCTACTTTTCGGGTTATCTAGTTTTTTCATTCCATTTAGCACA
AACACTATTTATATTTAATCTTTAAACCTTGTGCATCCATTCGATGCCTC
TG
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