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Contig Overview
Name | Cicer_arietinum_v1_Contig101 |
Unique Name | Cicer_arietinum_v1_Contig101 |
Type | contig |
Organism | Cicer arietinum (chickpea) |
Sequence length | 546 |
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | SEG | seg | seg | coord: 13..70 score |
None | No IPR available | SEG | seg | seg | coord: 1..24 score: NAcoord: 30..45 score: NAcoord: 50..61 score |
None | No IPR available | SEG | seg | seg | coord: 4..14 score |
None | No IPR available | SEG | seg | seg | coord: 5..78 score |
None | No IPR available | SEG | seg | seg | coord: 24..47 score |
IPR006706 | Extensin repeat | PFAM | PF04554 | Extensin_2 | coord: 21..75 score: 0.0 |
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig101 ID=Cicer_arietinum_v1_Contig101; Name=Cicer_arietinum_v1_Contig101; organism=Cicer arietinum; type=contig; length=546bp GACTAGAACAGGGGAATATATTTATTTGGTTTGTCAGTCAACTTGATAAA CCAAACTTTGAAAATTACAACGCATGCACGCCACTGCAGACACGTGGATG CTGGGGCAGTGCCTTATAGCTGTGCTAATACAACAAAAAACAAAAATTAA ATAAATAAACGCAGCTCTCTTAACAATATTAATCAAACACTGACGAAATA TATGTGAGAAGAATCCCCTCAATCTTCTTTTTGCAACGTCCACGGCTTTC TTTGCTTTCACACTTTCTGTTTAGATCCATATAGTGTGATGCCCAAGTAT CAGCTATCTAGTAATGGTAAGGCGGAGGAGGTGATTTATAATAACAGTGT GGTGGAGGTGGGGAATGGACTGGAGGAGGAGAGTGGTACTTATAAGGCTT CTTGTAGGGTGGGGGAGGAGAATGGTAAACTGGGTGAGGAATGTGAGGGG GGTAGGTGTGCACTGGTGGTGGGGGAGAATGGTAAATAGGATGAGGATGA GGGTACTTGTGGACCGGTGGTGGTGGAGAGTGGTAAATAGGGTGAG back to top
Annotated Terms
The
following terms have been associated with
this contig:
Vocabulary: Molecular Function
Term | Definition |
GO:0005199 | structural constituent of cell wall |
Vocabulary: Biological Process
Term | Definition |
GO:0009664 | plant-type cell wall organization |
Vocabulary: INTERPRO
Term | Definition |
IPR006706 | Extensin_dom |
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