Cicer_arietinum_v1_Contig103

Contig Overview


Name	Cicer_arietinum_v1_Contig103
Unique Name	Cicer_arietinum_v1_Contig103
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	700

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
HO062779	EST	HO062779:1..483 +	Cicer arietinum unigene v1	n/a
GR408791	EST	GR408791:120..556 +	Cicer arietinum unigene v1	n/a
GR392149	EST	GR392149:122..706 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
HO062779	HO062779	Cicer arietinum	EST
GR408791	GR408791	Cicer arietinum	EST
GR392149	GR392149	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Match: C6SW49_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.163e-56
Identity = 108/125 (86.40%), Postives = 110/125 (88.00%), Query Frame = -3

Query:  267 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLSMNEELLWDNGTPFPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXAVWNDKASKYPFTPKVYPYDNLRVELGGEP 641
            MAGRLTNAASRILGGNGVV+RSVASSLRLRSGMGLPVGKHYVP+KPL MNEELLWDNGT FPEPCIDRIADTVGKYEALAWLC            AVWNDKASK PFTPKVYPYDNLRVELGGEP
Sbjct:    1 MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYVPDKPLPMNEELLWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPFTPKVYPYDNLRVELGGEP 125

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Match: B7FHE0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.311e-54
Identity = 104/125 (83.20%), Postives = 105/125 (84.00%), Query Frame = -3

Query:  267 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLSMNEELLWDNGTPFPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXAVWNDKASKYPFTPKVYPYDNLRVELGGEP 641
            MAGRLTN AS+ILGGNGVVHRSVASSLRLRS M LPVGKHYVPNKPL MNEEL WDNGTPFPEPCIDRIADTVGKYEA AWLC            AVWNDKASK PF PKVYPYDNLRVELGGEP
Sbjct:    1 MAGRLTNVASQILGGNGVVHRSVASSLRLRSSMSLPVGKHYVPNKPLPMNEELTWDNGTPFPEPCIDRIADTVGKYEASAWLCGGLSCFAGLGLLAVWNDKASKTPFAPKVYPYDNLRVELGGEP 125

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Match: B9RWJ3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1020190 PE=4 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.829e-51
Identity = 97/124 (78.23%), Postives = 104/124 (83.87%), Query Frame = -3

Query:  267 AGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLSMNEELLWDNGTPFPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXAVWNDKASKYPFTPKVYPYDNLRVELGGEP 638
            AGRL+N ASRI+GGNGVV RS+ SSLRLRSGMGLPVGKH VP+KPL +NEEL+WDNGTPFPEPCIDRIADTVGKYEALAWLC            AVWNDKASK P+ PKVYPYDNLR ELGGEP
Sbjct:    3 AGRLSNVASRIMGGNGVVSRSIGSSLRLRSGMGLPVGKHIVPDKPLPVNEELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPYVPKVYPYDNLRAELGGEP 126

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Match: B9N3R4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814646 PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.531e-51
Identity = 97/125 (77.60%), Postives = 104/125 (83.20%), Query Frame = -3

Query:  267 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLSMNEELLWDNGTPFPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXAVWNDKASKYPFTPKVYPYDNLRVELGGEP 641
            MAGRL+N ASRI+GGNGVV RSVASSLRLRSGMGLPVGKH VP+KP+S+N+EL WDNGT FPEPCIDRIADTVGKYEALAWLC             VWNDKAS  PF PKVYPYDNL+VELGGEP
Sbjct:    1 MAGRLSNVASRIMGGNGVVSRSVASSLRLRSGMGLPVGKHIVPDKPISVNDELTWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPYDNLKVELGGEP 125

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Match: A9PCQ0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.241e-50
Identity = 96/125 (76.80%), Postives = 103/125 (82.40%), Query Frame = -3

Query:  267 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLSMNEELLWDNGTPFPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXAVWNDKASKYPFTPKVYPYDNLRVELGGEP 641
            MAGRL+N ASRI+GGNGVV RSVASSLRL SGMGLPVGKH VP+KP+S+N+EL WDNGT FPEPCIDRIADTVGKYEALAWLC             VWNDKAS  PF PKVYPYDNL+VELGGEP
Sbjct:    1 MAGRLSNVASRIMGGNGVVSRSVASSLRLSSGMGLPVGKHIVPDKPISVNDELTWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPYDNLKVELGGEP 125

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Match: Q9FGK0_ARATH (AT5g47570/MNJ7_16 OS=Arabidopsis thaliana GN=At5g47570 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.826e-48
Identity = 95/125 (76.00%), Postives = 103/125 (82.40%), Query Frame = -3

Query:  267 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLSMNEELLWDNGTPFPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXAVWNDKASKYPFTPKVYPYDNLRVELGGEP 641
            MAGRL+  ASRI+GGNGVV RSV SSLR R+GMGLPVGKH VP+KPLS+N+EL+WDNGT FPEPCIDRIADTVGKYEALAWL             AV NDKASK PFTP+VYPYDNLRVELGGEP
Sbjct:    1 MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTAFPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVELGGEP 125

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Match: D7MP34_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494216 PE=4 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.826e-48
Identity = 95/125 (76.00%), Postives = 103/125 (82.40%), Query Frame = -3

Query:  267 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLSMNEELLWDNGTPFPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXAVWNDKASKYPFTPKVYPYDNLRVELGGEP 641
            MAGRL+  ASRI+GGNGVV RSV SSLR R+GMGLPVGKH VP+KPLS+N+EL+WDNGT FPEPCIDRIADTVGKYEALAWL             AV NDKASK PFTP+VYPYDNLRVELGGEP
Sbjct:    1 MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTAFPEPCIDRIADTVGKYEALAWLSGGLGFFAGLGLLAVLNDKASKVPFTPRVYPYDNLRVELGGEP 125

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Match: C6SZP6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.358e-46
Identity = 93/145 (64.14%), Postives = 104/145 (71.72%), Query Frame = 2

Query:  206 RK*QLYKTTISHPISALDLLMVHHQAPLANCHMDIPWV*KGTWRLYHSTQPIIPKTRKNSILHKATPMLHTFXXXXXXXXXXXXEMEYRCPIKVPHSLKGVCLGHSVCRRGGPCRSGGEEMKLQIGEQRHFRPRFLMLRSSIYLP 640
            R+  +++T  SHPI ALDL MVHHQAPLA+CHMDI WV   +WRL HSTQP IP TRKNSI H A PMLHTF            EM+ RCP  VPHS +GVC  HSVCRRGGPCRSGGEE K +IG++R FR R  MLRSSI LP
Sbjct:   14 RRRTIHQTRTSHPIVALDLPMVHHQAPLADCHMDILWVQTVSWRLCHSTQPTIPATRKNSIPHTARPMLHTFRQCQQYDLYTVREMQCRCPTGVPHSWEGVCREHSVCRRGGPCRSGGEERKQRIGKRRRFRLRSSMLRSSISLP 158

HSP 2 Score: 25.7942 bits (55), Expect = 1.358e-46
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 1

Query:  169 IHYFEPHKSTNEQKITI 219
            I YFE HKSTN+++ TI
Sbjct:    2 IPYFELHKSTNKRRRTI 18

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Match: Q9FWN8_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBa0015J15.32 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.691e-41
Identity = 81/125 (64.80%), Postives = 93/125 (74.40%), Query Frame = -3

Query:  267 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLSMNEELLWDNGTPFPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXAVWNDKASKYPFTPKVYPYDNLRVELGGEP 641
            MAGRLT A SR+LGG G   R+  S+LR R+GMGLPVG+H VP+KPL  N+EL+WDNGTPFPEPCIDR+A  +GKYEALAWLC            A  NDKASK P+TPKVYP+DNLR ELG  P
Sbjct:    1 MAGRLTAAGSRVLGGQGAAARAAVSALRHRAGMGLPVGRHIVPDKPLPTNDELVWDNGTPFPEPCIDRLAPHIGKYEALAWLCGGLGFFATLGLAATLNDKASKIPYTPKVYPFDNLREELGDRP 125

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Match: B4FC89_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.691e-41
Identity = 84/125 (67.20%), Postives = 95/125 (76.00%), Query Frame = -3

Query:  267 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLSMNEELLWDNGTPFPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXAVWNDKASKYPFTPKVYPYDNLRVELGGEP 641
            MAGRLT A SRILGG G   R+ AS+LR R+GMGLPVG+H VP+KPL +N+EL+WDNGTPFPEPCIDR+A  +GKYEALAWLC            AV NDKAS  P+TPKVYPYDNLR ELG  P
Sbjct:    1 MAGRLTAAGSRILGGGGA--RAAASALRHRAGMGLPVGRHIVPDKPLPVNDELVWDNGTPFPEPCIDRLAPHIGKYEALAWLCGGLGFFAALGMAAVVNDKASNIPYTPKVYPYDNLRAELGDRP 123

[Close]

BLAST of Cicer_arietinum_v1_Contig103 vs. TAIR peptide
Match: AT5G47570.1 (| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19292869-19294666 REVERSE LENGTH=125)

HSP 1 Score: 194.126 bits (492), Expect = 6.048e-50
Identity = 95/125 (76.00%), Postives = 103/125 (82.40%), Query Frame = -3

Query:  267 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLSMNEELLWDNGTPFPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXAVWNDKASKYPFTPKVYPYDNLRVELGGEP 641
            MAGRL+  ASRI+GGNGVV RSV SSLR R+GMGLPVGKH VP+KPLS+N+EL+WDNGT FPEPCIDRIADTVGKYEALAWL             AV NDKASK PFTP+VYPYDNLRVELGGEP
Sbjct:    1 MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTAFPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVELGGEP 125

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig103 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig103 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6SW49_SOYBN	5.163e-56	86.40	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FHE0_MEDTR	6.311e-54	83.20	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9RWJ3_RICCO	3.829e-51	78.23	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9N3R4_POPTR	6.531e-51	77.60	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PCQ0_POPTR	3.241e-50	76.80	Putative uncharacterized protein OS=Populus tricho...	[more]
Q9FGK0_ARATH	8.826e-48	76.00	AT5g47570/MNJ7_16 OS=Arabidopsis thaliana GN=At5g4...	[more]
D7MP34_ARALY	8.826e-48	76.00	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C6SZP6_SOYBN	1.358e-46	64.14	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q9FWN8_ORYSJ	4.691e-41	64.80	Expressed protein OS=Oryza sativa subsp. japonica ...	[more]
B4FC89_MAIZE	4.691e-41	67.20	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of Cicer_arietinum_v1_Contig103 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G47570.1	6.048e-50	76.00	\| Symbols: \| unknown protein; Has 30201 Blast hit...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 34..45 score
None	No IPR available	SEG	seg	seg	coord: 89..101 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig103 ID=Cicer_arietinum_v1_Contig103; Name=Cicer_arietinum_v1_Contig103; organism=Cicer arietinum; type=contig; length=700bp
CGGAAGGTTCAATTTTATTAACCTTGTAAAATTATCCACAGTTCCATAGA
CTAAATAAATTAGGCAAAATAACAACTCACTATAGGGACCAAAAGCATGA
GAACGTTCAAAAAAACTAAACCAAATTCGACGCTTCGATTTGTATTTGGT
TTCAGCAAGTCTTCCACAATACATTATTTTGAACCACATAAGAGTACAAA
TGAACAGAAAATAACAATTATATAAAACAACAATTTCTCATCCCATTTCG
GCCTTGGATCTACTTATGGTTCACCACCAAGCTCCACTCGCAAATTGTCA
TATGGATATACCTTGGGTGTAAAAGGGTACTTGGAGGCTTTATCATTCCA
CACAGCCAATAATCCCAAAGACGCGAAAAAACTCAATCCTCCACAAAGCC
ACGCCAATGCTTCATACTTTCCAACAGTATCAGCAATACGATCGATACAG
GGTTCGGGAAATGGAGTACCGTTGTCCCATAAAAGTTCCTCATTCATTGA
AAGGGGTTTGTTTGGGACATAGTGTTTGCCGACGGGGAGGCCCATGCCGG
AGCGGAGGCGAAGAGATGAAGCTACAGATCGGTGAACAACGCCATTTCCG
CCCAAGATTCTTGATGCTGCGTTCGTCAATCTACCTGCCATGATTTTGAT
TTTTGATTATTGCGATGCCTTCTCTCGATTCTTCTTCTTCCTTATTGTTC

Search form

Cicer_arietinum_v1_Contig103