Cicer_arietinum_v1_Contig1033

Contig Overview
NameCicer_arietinum_v1_Contig1033
Unique NameCicer_arietinum_v1_Contig1033
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length188
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR914970ESTGR914970:1..188 +Cicer arietinum unigene v1n/a
GR914843ESTGR914843:1..187 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR914970GR914970Cicer arietinumEST
GR914843GR914843Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. SwissProt
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.527e-11
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSET 133
            YQRSTTAISVVAPICYAHLAA Q+GQFMKFE+ +ET
Sbjct:  816 YQRSTTAISVVAPICYAHLAAAQMGQFMKFEEFAET 851
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. SwissProt
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.247e-10
Identity = 32/52 (61.54%), Postives = 35/52 (67.31%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETXXXXXXXXXXXXVPRP 181
            YQRSTTAISVVAPICYAHLAA Q+G F+KFED S+             VP P
Sbjct:  844 YQRSTTAISVVAPICYAHLAAAQVGTFLKFEDMSDASSSQGGHTSVGSVPVP 895
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. SwissProt
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 5.005e-10
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSET 133
            YQRSTTAISVVAPICYAHLAA Q+ QF+KF++ SET
Sbjct:  837 YQRSTTAISVVAPICYAHLAAAQVSQFIKFDEMSET 872
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. SwissProt
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 3.966e-7
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFED 121
            YQRSTTAIS VAPICYAHLAA Q+ QF++ +D
Sbjct:  825 YQRSTTAISGVAPICYAHLAAAQVSQFVRLDD 856
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Match: B9SP45_RICCO (Eukaryotic translation initiation factor 2c, putative OS=Ricinus communis GN=RCOM_0617610 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.786e-12
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETXXXXXXXXXXXXVPRPR 184
            YQRSTTAISVVAP+CYAHLAATQ+GQFMKFED SET            VP P+
Sbjct:  854 YQRSTTAISVVAPVCYAHLAATQMGQFMKFEDASETSSSHGGVTSAGAVPVPQ 906
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Match: D5FQ91_PELHO (Argonaute 4-like protein OS=Pelargonium hortorum PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.180e-11
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSET 133
            YQRSTTAISVVAPICYAHLAATQ+GQFMKFED SET
Sbjct:  865 YQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSET 900
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Match: D7T1K2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037488001 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.719e-11
Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETXXXXXXXXXXXXVPRPR 184
            YQRSTTAISVVAPICYAHLAATQ+ QFMKFED SET            VP P+
Sbjct:  846 YQRSTTAISVVAPICYAHLAATQMSQFMKFEDTSETSSSQGGLTSAGPVPVPQ 898
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Match: Q2LFC1_NICBE (AGO4-2 (Fragment) OS=Nicotiana benthamiana PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.285e-11
Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSET 133
            YQRSTTAISVVAPICYAHLAATQ+GQ+MKFED SET
Sbjct:  838 YQRSTTAISVVAPICYAHLAATQMGQWMKFEDTSET 873
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Match: D7LFI9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481584 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.413e-10
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSET 133
            YQRSTTAISVVAPICYAHLAA QLG FMKFED+SET
Sbjct:  857 YQRSTTAISVVAPICYAHLAAAQLGTFMKFEDQSET 892
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Match: B9T7B0_RICCO (Eukaryotic translation initiation factor 2c, putative OS=Ricinus communis GN=RCOM_0002720 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.413e-10
Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETXXXXXXXXXXXXVPRP 181
            YQRSTTAIS+VAP+CYAHLAA Q+GQFMKFED SET            +P P
Sbjct:  796 YQRSTTAISIVAPVCYAHLAAQQMGQFMKFEDLSETSSGHGSMTSAGPIPVP 847
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Match: B9IAL0_POPTR (Argonaute protein group OS=Populus trichocarpa GN=AGO902 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.410e-10
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSET 133
            YQRSTTA+S+VAPICYAHLAA Q+GQFMKFED SET
Sbjct:  802 YQRSTTAVSIVAPICYAHLAAAQIGQFMKFEDFSET 837
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Match: Q9ZVD5_ARATH (Argonaute (AGO1)-like protein OS=Arabidopsis thaliana GN=At2g27040 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.112e-10
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSET 133
            YQRST+AISVVAPICYAHLAA QLG FMKFED+SET
Sbjct:  857 YQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSET 892
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Match: D7TEE7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030512001 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.013e-10
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETXXXXXXXXXXXXVPRP 181
            YQRSTTAIS+VAP+CYAHLAA Q+GQF+KF+D SET            VP P
Sbjct:  833 YQRSTTAISIVAPVCYAHLAAQQMGQFIKFDDLSETSSAKRAITTEESVPVP 884
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Match: B9FWI9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_23783 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.160e-10
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSET 133
            YQRSTTAISVVAPICYAHLAA Q+GQFMKFE+ +ET
Sbjct:  796 YQRSTTAISVVAPICYAHLAAAQMGQFMKFEEFAET 831
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TAIR peptide
Match: AT2G27040.2 (| Symbols: AGO4 | Argonaute family protein | chr2:11536795-11541503 REVERSE LENGTH=924)

HSP 1 Score: 67.781 bits (164), Expect = 1.567e-12
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSET 133
            YQRST+AISVVAPICYAHLAA QLG FMKFED+SET
Sbjct:  857 YQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSET 892
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TAIR peptide
Match: AT2G27040.1 (| Symbols: AGO4, OCP11 | Argonaute family protein | chr2:11536795-11541503 REVERSE LENGTH=924)

HSP 1 Score: 67.781 bits (164), Expect = 1.567e-12
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSET 133
            YQRST+AISVVAPICYAHLAA QLG FMKFED+SET
Sbjct:  857 YQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSET 892
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TAIR peptide
Match: AT5G21150.1 (| Symbols: AGO9 | Argonaute family protein | chr5:7193472-7198113 FORWARD LENGTH=896)

HSP 1 Score: 62.7734 bits (151), Expect = 5.041e-11
Identity = 31/52 (59.62%), Postives = 35/52 (67.31%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETXXXXXXXXXXXXVPRP 181
            YQRSTTAISVVAP+CYAHLAA Q+G  MK+E+ SET            VP P
Sbjct:  829 YQRSTTAISVVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGAVPVP 880
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TAIR peptide
Match: AT5G21030.1 (| Symbols: | PAZ domain-containing protein / piwi domain-containing protein | chr5:7139892-7144272 REVERSE LENGTH=850)

HSP 1 Score: 62.3882 bits (150), Expect = 6.583e-11
Identity = 32/52 (61.54%), Postives = 34/52 (65.38%), Query Frame = 2 
Query:   26 YQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETXXXXXXXXXXXXVPRP 181
            YQRSTTAIS+VAPICYAHLAA Q+   MKFED SET            VP P
Sbjct:  783 YQRSTTAISLVAPICYAHLAAAQMATAMKFEDMSETSSSHGGITTAGAVPVP 834
[Close]
BLAST of Cicer_arietinum_v1_Contig1033 vs. TAIR peptide
Match: AT2G32940.1 (| Symbols: AGO6 | Argonaute family protein | chr2:13972218-13976856 REVERSE LENGTH=878)

HSP 1 Score: 49.6766 bits (117), Expect = 4.416e-7
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 2 
Query:   29 QRSTTAISVVAPICYAHLAATQLGQFMKFEDKSE 130
            QRSTTA S+VAP+ YAHLAA Q+ QF KFE  SE
Sbjct:  824 QRSTTATSIVAPVRYAHLAAAQVAQFTKFEGISE 857
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1033 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
AGO16_ORYSJ4.527e-1186.11Protein argonaute 16 OS=Oryza sativa subsp. japoni... [more]
AGO4B_ORYSJ2.247e-1061.54Protein argonaute 4B OS=Oryza sativa subsp. japoni... [more]
AGO4A_ORYSJ5.005e-1080.56Protein argonaute 4A OS=Oryza sativa subsp. japoni... [more]
AGO15_ORYSJ3.966e-775.00Protein argonaute 15 OS=Oryza sativa subsp. japoni... [more]
back to top
BLAST of Cicer_arietinum_v1_Contig1033 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SP45_RICCO9.786e-1267.92Eukaryotic translation initiation factor 2c, putat... [more]
D5FQ91_PELHO2.180e-1194.44Argonaute 4-like protein OS=Pelargonium hortorum P... [more]
D7T1K2_VITVI3.719e-1167.92Whole genome shotgun sequence of line PN40024, sca... [more]
Q2LFC1_NICBE8.285e-1191.67AGO4-2 (Fragment) OS=Nicotiana benthamiana PE=2 SV... [more]
D7LFI9_ARALY1.413e-1091.67Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9T7B0_RICCO1.413e-1063.46Eukaryotic translation initiation factor 2c, putat... [more]
B9IAL0_POPTR2.410e-1086.11Argonaute protein group OS=Populus trichocarpa GN=... [more]
Q9ZVD5_ARATH4.112e-1088.89Argonaute (AGO1)-like protein OS=Arabidopsis thali... [more]
D7TEE7_VITVI7.013e-1061.54Whole genome shotgun sequence of line PN40024, sca... [more]
B9FWI9_ORYSJ9.160e-1086.11Putative uncharacterized protein OS=Oryza sativa s... [more]
back to top
BLAST of Cicer_arietinum_v1_Contig1033 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G27040.21.567e-1288.89| Symbols: AGO4 | Argonaute family protein | chr2:... [more]
AT2G27040.11.567e-1288.89| Symbols: AGO4, OCP11 | Argonaute family protein ... [more]
AT5G21150.15.041e-1159.62| Symbols: AGO9 | Argonaute family protein | chr5:... [more]
AT5G21030.16.583e-1161.54| Symbols: | PAZ domain-containing protein / piwi... [more]
AT2G32940.14.416e-770.59| Symbols: AGO6 | Argonaute family protein | chr2:... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22891EUKARYOTIC TRANSLATION INITIATION FACTOR 2Ccoord: 9..58
score: 2.2
NoneNo IPR availableSEGsegsegcoord: 45..56
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1033 ID=Cicer_arietinum_v1_Contig1033; Name=Cicer_arietinum_v1_Contig1033; organism=Cicer arietinum; type=contig; length=188bp
GATTTCGAGCGGCCGCCCGGGCAGGTACCAGAGGAGCACCACTGCTATTT
CAGTTGTTGCACCCATATGCTATGCACACTTAGCTGCAACTCAATTGGGG
CAGTTCATGAAATTTGAAGACAAATCTGAGACATCCTCAAGCCATGGTGG
GCTGAGTGCTGCAGGAGCTGTACCTCGGCCGCGACCAC
back to top