Cicer_arietinum_v1_Contig1043

Contig Overview
NameCicer_arietinum_v1_Contig1043
Unique NameCicer_arietinum_v1_Contig1043
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length459
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR914837ESTGR914837:1..311 +Cicer arietinum unigene v1n/a
GR914836ESTGR914836:1..459 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR914837GR914837Cicer arietinumEST
GR914836GR914836Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Match: D7T7W0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024473001 PE=4 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.107e-59
Identity = 110/144 (76.39%), Postives = 123/144 (85.42%), Query Frame = 2
Query:   26 YRAVRDSCRGHPVDVASLHAFLSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            Y+AV D+CRG PVD+ SL A+LS++ +SD VKLEEFPSIIPCSIIH  TNSCLAH  NA S+TF+KTFPLYFSLTFVPFVVLHLQKF   P RT W A+KGAVRST FLSAFVGIFQ VIC HRK+AS+DHKLVYW+AGG SAL
Sbjct:  251 YKAVMDTCRGSPVDIVSLSAYLSNRRESDNVKLEEFPSIIPCSIIHPDTNSCLAHNANAASATFRKTFPLYFSLTFVPFVVLHLQKFMDTPARTCWHAIKGAVRSTTFLSAFVGIFQAVICLHRKVASKDHKLVYWVAGGTSAL 394          
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Match: B9ICE7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_575511 PE=4 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 3.595e-59
Identity = 109/144 (75.69%), Postives = 125/144 (86.81%), Query Frame = 2
Query:   26 YRAVRDSCRGHPVDVASLHAFLSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            Y+AV+++CRG P+DVASL AFLS +GK   VKLEEFPSIIPCS++H GTNSCLA   NA S+TF+KTFPLYFSLTFVP+VVLHLQKF  AP RT W A++ AVRST FLSAFVGIFQGVIC HRK+++RDHKLVYWIAGGISAL
Sbjct:  249 YKAVKETCRGGPLDVASLSAFLSRRGKLGSVKLEEFPSIIPCSVVHPGTNSCLAQNANAASATFRKTFPLYFSLTFVPYVVLHLQKFMDAPARTCWLALRDAVRSTTFLSAFVGIFQGVICLHRKISTRDHKLVYWIAGGISAL 392          
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Match: B9NAP1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_588174 PE=4 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 9.789e-57
Identity = 107/144 (74.31%), Postives = 122/144 (84.72%), Query Frame = 2
Query:   26 YRAVRDSCRGHPVDVASLHAFLSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            Y+++R+ CR  PVD+ASL AFLS +GK D VKLEEFPSIIPCS+IH  T+SCLA   NA S+TF+KTFPLYFSLTFVP+VVL LQKF  AP  T WFA++ AV STAFLSAFVGIFQGVIC HRK+A+RDHKLVYWIAGGISAL
Sbjct:  249 YKSIRECCRCGPVDLASLSAFLSRRGKPDSVKLEEFPSIIPCSVIHPDTHSCLAQNANAASATFRKTFPLYFSLTFVPYVVLQLQKFMDAPAHTCWFALRDAVHSTAFLSAFVGIFQGVICLHRKVATRDHKLVYWIAGGISAL 392          
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Match: B9RA10_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1502640 PE=4 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 3.720e-56
Identity = 106/144 (73.61%), Postives = 121/144 (84.03%), Query Frame = 2
Query:   26 YRAVRDSCRGHPVDVASLHAFLSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            Y+AVRDSCRG PVDVASL A+L  + K + VKLE+FPSIIPCS+IH  T+SCL H  NA S+TF+KTFPLYFSLTFVP+VVLHLQ+F  +P  T W AV+ AVRST FLSAFVGIFQGVIC HRK+A+ DHKLVYWIAGGISAL
Sbjct:  253 YKAVRDSCRGAPVDVASLSAYLCSRRKLNSVKLEKFPSIIPCSVIHPDTDSCLTHNANAASATFRKTFPLYFSLTFVPYVVLHLQRFMESPAHTCWLAVRDAVRSTTFLSAFVGIFQGVICLHRKVATVDHKLVYWIAGGISAL 396          
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Match: D7MQX9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_918148 PE=4 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 7.756e-54
Identity = 98/144 (68.06%), Postives = 121/144 (84.03%), Query Frame = 2
Query:   26 YRAVRDSCRGHPVDVASLHAFLSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            Y+AVR+ CRG P+DVASL A++S K ++  VK+EEF SIIPC+ IH  TNSCLA   NA S+TFKKTFPLY+SLTFVP+VVLHLQKF A+P+RT W A++ +VRST+FLSAFVGIFQ  IC HRK+A++DHKLVYW AGG++AL
Sbjct:  258 YQAVRECCRGGPIDVASLSAYISSKNEASDVKVEEFASIIPCAAIHPNTNSCLAQNANAMSATFKKTFPLYYSLTFVPYVVLHLQKFMASPYRTSWLAIRDSVRSTSFLSAFVGIFQAFICAHRKVATKDHKLVYWFAGGVAAL 401          
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Match: Q9LU59_ARATH (Gb|AAD46013.1 OS=Arabidopsis thaliana GN=At5g51150 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.013e-53
Identity = 99/144 (68.75%), Postives = 120/144 (83.33%), Query Frame = 2
Query:   26 YRAVRDSCRGHPVDVASLHAFLSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            Y+AVR+ CRG P+DVASL A++S K ++  VK+EEF SIIPC+ IH  TNSCLA   NA S+TFKKTFPLYFSLTFVP+VVLHLQKF A+P+RT W A++ +VRST+FLSAFVGIFQ  IC HRK+A++DHKLVYW AGG +AL
Sbjct:  258 YQAVRECCRGGPIDVASLSAYISSKNEASDVKVEEFASIIPCAAIHPNTNSCLAQNANAMSATFKKTFPLYFSLTFVPYVVLHLQKFMASPYRTSWLAIRDSVRSTSFLSAFVGIFQAFICAHRKVATKDHKLVYWFAGGAAAL 401          
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Match: A5BG04_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030401 PE=4 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.120e-52
Identity = 103/144 (71.53%), Postives = 117/144 (81.25%), Query Frame = 2
Query:   26 YRAVRDSCRGHPVDVASLHAFLSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            Y+AV D+CRG PV++ SL A+LS++ +SD VKLEEFPSIIPCSIIH  TNSCLAH  NA S+TF+KTFPLYFSLTFVPFVVLHLQK           A+KGAVRST FLSAFVGIFQ  IC HRK+AS+DHKLVYW+AGG SAL
Sbjct:  251 YKAVMDTCRGSPVNIVSLSAYLSNRRESDNVKLEEFPSIIPCSIIHPDTNSCLAHNANAASATFRKTFPLYFSLTFVPFVVLHLQK-----------AIKGAVRSTTFLSAFVGIFQAXICLHRKVASKDHKLVYWVAGGXSAL 383          
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Match: C5X9A4_SORBI (Putative uncharacterized protein Sb02g033990 OS=Sorghum bicolor GN=Sb02g033990 PE=4 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 9.184e-47
Identity = 94/144 (65.28%), Postives = 107/144 (74.31%), Query Frame = 2
Query:   26 YRAVRDSCRGHPVDVASLHAFLSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            Y+AVR+ CRG PVD+ +L A+LS+K   D + L   PSIIPCS IH    SCLA  IN  SSTFKKTFPLYFSLTFVPFVVL LQKF  +P  T W A+ GAVRST FLSAFV IFQ  IC HRK+A++DHKLVYW AG +S L
Sbjct:  282 YKAVRECCRGGPVDLTALSAYLSNKRNLDLINLTTNPSIIPCSAIHPDRASCLAQNINVVSSTFKKTFPLYFSLTFVPFVVLRLQKFLESPTATCWRALVGAVRSTTFLSAFVTIFQAAICLHRKVANKDHKLVYWFAGLMSGL 425          
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Match: B9FXB8_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24320 PE=4 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.262e-45
Identity = 89/144 (61.81%), Postives = 107/144 (74.31%), Query Frame = 2
Query:   26 YRAVRDSCRGHPVDVASLHAFLSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            Y+AVRD CRG  VD+  L A+L++K  S+ + L + P IIPCS+IH    SCLAH ++ +SSTFKKTFPLYFSLTFVPFVVL LQKF  +P  T W A+ GAVRST FLSAFV  FQ  IC HRK+A++DHK VYW AG +S L
Sbjct:  366 YKAVRDCCRGGHVDLIGLSAYLANKKNSNLINLTKSPPIIPCSVIHPDRASCLAHNVSVSSSTFKKTFPLYFSLTFVPFVVLRLQKFLESPAATCWRALVGAVRSTTFLSAFVTFFQAAICLHRKVATKDHKFVYWFAGLMSGL 509          
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Match: A9RQI2_PHYPA (Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_22122 PE=4 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 9.835e-41
Identity = 84/144 (58.33%), Postives = 107/144 (74.31%), Query Frame = 2
Query:   29 RAVRDSCRGHPVDVASLHAF-LSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            +AVR++ RG P+D+ +L AF L   G    V L+    IIPC+ IH  T SCLAH   AT +TF+KTFPLY SLTFVPFVVL++QKF  AP  TFW A+K A RST FLSAFVG++QGVIC  RK+ ++DHKL+Y++AGG++AL
Sbjct:  240 KAVRENNRGLPIDLKALSAFVLERSGVPGPVGLKPDSPIIPCTGIHPQTTSCLAHNGKATRATFRKTFPLYLSLTFVPFVVLNIQKFMHAPLHTFWNALKSATRSTCFLSAFVGLYQGVICLQRKVVTKDHKLIYFLAGGVAAL 383          
BLAST of Cicer_arietinum_v1_Contig1043 vs. TAIR peptide
Match: AT5G51150.1 (| Symbols: | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr5:20789034-20791495 FORWARD LENGTH=531)

HSP 1 Score: 212.616 bits (540), Expect = 7.567e-56
Identity = 99/144 (68.75%), Postives = 120/144 (83.33%), Query Frame = 2
Query:   26 YRAVRDSCRGHPVDVASLHAFLSHKGKSDYVKLEEFPSIIPCSIIHAGTNSCLAHEINATSSTFKKTFPLYFSLTFVPFVVLHLQKFTAAPFRTFWFAVKGAVRSTAFLSAFVGIFQGVICFHRKLASRDHKLVYWIAGGISAL 457
            Y+AVR+ CRG P+DVASL A++S K ++  VK+EEF SIIPC+ IH  TNSCLA   NA S+TFKKTFPLYFSLTFVP+VVLHLQKF A+P+RT W A++ +VRST+FLSAFVGIFQ  IC HRK+A++DHKLVYW AGG +AL
Sbjct:  258 YQAVRECCRGGPIDVASLSAYISSKNEASDVKVEEFASIIPCAAIHPNTNSCLAQNANAMSATFKKTFPLYFSLTFVPYVVLHLQKFMASPYRTSWLAIRDSVRSTSFLSAFVGIFQAFICAHRKVATKDHKLVYWFAGGAAAL 401          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1043 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7T7W0_VITVI2.107e-5976.39Whole genome shotgun sequence of line PN40024, sca... [more]
B9ICE7_POPTR3.595e-5975.69Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9NAP1_POPTR9.789e-5774.31Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RA10_RICCO3.720e-5673.61Putative uncharacterized protein OS=Ricinus commun... [more]
D7MQX9_ARALY7.756e-5468.06Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9LU59_ARATH1.013e-5368.75Gb|AAD46013.1 OS=Arabidopsis thaliana GN=At5g51150... [more]
A5BG04_VITVI1.120e-5271.53Putative uncharacterized protein OS=Vitis vinifera... [more]
C5X9A4_SORBI9.184e-4765.28Putative uncharacterized protein Sb02g033990 OS=So... [more]
B9FXB8_ORYSJ2.262e-4561.81Putative uncharacterized protein OS=Oryza sativa s... [more]
A9RQI2_PHYPA9.835e-4158.33Predicted protein (Fragment) OS=Physcomitrella pat... [more]
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BLAST of Cicer_arietinum_v1_Contig1043 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G51150.17.567e-5668.75| Symbols: | Mitochondrial import inner membrane ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12459UNCHARACTERIZEDcoord: 9..152
score: 1.1
NoneNo IPR availableSEGsegsegcoord: 12..25
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1043 ID=Cicer_arietinum_v1_Contig1043; Name=Cicer_arietinum_v1_Contig1043; organism=Cicer arietinum; type=contig; length=459bp
GATTTCGAGCGGCCGCCCGGGCAGGTACAGGGCTGTAAGGGATAGCTGCA
GAGGTCATCCAGTTGACGTTGCTTCACTACATGCTTTCTTATCTCACAAA
GGAAAATCTGACTATGTAAAGTTGGAAGAATTTCCCTCTATTATTCCTTG
TTCCATCATTCATGCAGGAACAAATTCATGTTTAGCTCATGAAATAAATG
CAACATCATCAACGTTTAAGAAGACATTCCCACTTTACTTCTCTTTGACC
TTTGTCCCATTTGTCGTTCTGCACCTACAAAAGTTCACTGCAGCTCCTTT
CCGCACTTTCTGGTTTGCCGTTAAAGGGGCCGTTCGCTCAACAGCCTTTT
TGTCTGCTTTTGTTGGAATCTTTCAGGGAGTCATATGTTTTCATAGAAAA
CTTGCTTCAAGAGATCACAAATTGGTGTATTGGATAGCAGGTGGAATATC
TGCCCTTTC
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