Cicer_arietinum_v1_Contig1057

Contig Overview


Name	Cicer_arietinum_v1_Contig1057
Unique Name	Cicer_arietinum_v1_Contig1057
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	455

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR914823	EST	GR914823:1..222 +	Cicer arietinum unigene v1	n/a
GR914561	EST	GR914561:1..222 +	Cicer arietinum unigene v1	n/a
GR914518	EST	GR914518:1..445 +	Cicer arietinum unigene v1	n/a
GR914610	EST	GR914610:1..455 +	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR914823	GR914823	Cicer arietinum	EST
GR914561	GR914561	Cicer arietinum	EST
GR914518	GR914518	Cicer arietinum	EST
GR914610	GR914610	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Match: XRN3_ARATH (5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 3.064e-62
Identity = 112/141 (79.43%), Postives = 127/141 (90.07%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNA-VVPKKPFQFLNIWTLREYLE 437
            +YY+HLRLN+D GW NIKVILSDANVPGEGEHKIMSYIRLQRNL G DPNTRHCLYGLDADLIMLGLATHEVHFSILREVV+TPG Q++CF+CGQMGH A++C+GK +K+AGE DEKG+     KKP+QFL+IW LREYLE
Sbjct:  175 QYYVHLRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKKPYQFLHIWVLREYLE 315

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Match: XRN2_ARATH (5'-3' exoribonuclease 2 OS=Arabidopsis thaliana GN=XRN2 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.968e-57
Identity = 104/142 (73.24%), Postives = 120/142 (84.51%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPGQD-KCFVCGQMGHMAADCQGKARKKAGEFDEKGNA-VVPKKPFQFLNIWTLREYLEY 440
            RYYIH+RLN+DPGW NIKVILSDANVPGEGEHKIMSYIR  +N  G +PNT HCLYGLDADLIML LATHE+HFSILREVVF PG++ KCF+CGQ GH AADC+GK ++K GE  +   A VV KKP++F+NIW LREYLE+
Sbjct:  177 RYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILREYLEH 318

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Match: XRN4_ARATH (5'-3' exoribonuclease 4 OS=Arabidopsis thaliana GN=XRN4 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.991e-53
Identity = 100/141 (70.92%), Postives = 114/141 (80.85%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYLEY 440
            +YYI  RLN++PGW  +KVILSD+NVPGEGEHKIMSYIRLQRNL G DPNTRHCLYGLDADLIML LATHEVHFSILREV+  PG Q+KCFVCGQ GH A+DC G    K+G  +   +  + KK +QFLNIW LREYL+Y
Sbjct:  176 QYYIQSRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPG----KSGSNNAAADIPIHKKKYQFLNIWVLREYLQY 312

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Match: XRN2_NEUCR (5'-3' exoribonuclease 2 OS=Neurospora crassa GN=rat-1 PE=3 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 4.915e-44
Identity = 89/142 (62.68%), Postives = 106/142 (74.65%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPGQDK----CFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYL 434
            RY+   +LN DP W NIKVI+SDA VPGEGEHKIM ++R QR     DPNTRH +YGLDADLIMLGLATHE HF +LRE VF   QD     C +CGQ GH A +C+G+A++K GEFDEK +AVVP KPF +L++  LREYL
Sbjct:  181 RYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVF--AQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEK-DAVVPLKPFIWLHVSILREYL 319

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Match: XRN2_CHAGB (5'-3' exoribonuclease 2 OS=Chaetomium globosum GN=RAT1 PE=3 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 7.847e-42
Identity = 85/140 (60.71%), Postives = 104/140 (74.29%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILRE-VVFTPGQDK-CFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYL 434
            RY+   +LN DP W  +KVI+SDA VPGEGEHKIM ++R QRN    DPNTRH +YGLDADLIMLGLATHE HF +LRE V F  G+ + C +CGQ GH   +C+G+A++KAGEFDEK  A  P KPF +L++  LREYL
Sbjct:  182 RYWCAYKLNTDPAWAKMKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKARMCKLCGQKGHDERNCRGEAKEKAGEFDEKDKA-EPLKPFIWLHVSILREYL 320

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Match: XRN2_USTMA (5'-3' exoribonuclease 2 OS=Ustilago maydis GN=RAT1 PE=3 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 1.339e-41
Identity = 82/141 (58.16%), Postives = 103/141 (73.05%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPGQ--DKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYLE 437
            RY++  ++N+DPGW +I+VI+SDA+VPGEGEHKIM +IR QR+    DPNT+H +YGLDADLIML LATHE +F +LRE VF        C +CGQ GH AA C G A+KK+G+ DE       KKPF FL++ TLREYLE
Sbjct:  182 RYWVAQKINSDPGWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLDADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGQHDEIAPTPPEKKPFIFLDVATLREYLE 322

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Match: XRN2_ASPOR (5'-3' exoribonuclease 2 OS=Aspergillus oryzae GN=rat1 PE=3 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 1.748e-41
Identity = 82/140 (58.57%), Postives = 100/140 (71.43%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPGQD--KCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYL 434
            RY+I  +LN DP W  +K+I+SDA VPGEGEHKIM ++R QR     DPNTRH +YGLDADLIMLGLATHE HF +LRE VF        C +CGQ GH A +C+G+A++K G+FDEKG      KPF +LN+  LREYL
Sbjct:  178 RYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQFDEKGKG-TSLKPFIWLNVSILREYL 316

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Match: XRN2_EMENI (5'-3' exoribonuclease 2 OS=Emericella nidulans GN=rat1 PE=3 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 2.982e-41
Identity = 83/140 (59.29%), Postives = 100/140 (71.43%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVF--TPGQDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYL 434
            RY+I  +LN DP W  +K+I+SDA VPGEGEHKIM +IR QR     DPN RH +YGLDADLIMLGLATHE HF +LRE VF     Q  C +CGQ GH A +C+G+A++K GEFDEKG      KPF +L++  LREYL
Sbjct:  179 RYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRASPEHDPNARHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKQRTCHLCGQPGHKAEECRGQAKEKNGEFDEKGKGAT-LKPFIWLHVSILREYL 317

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Match: XRN2_GIBZE (5'-3' exoribonuclease 2 OS=Gibberella zeae GN=RAT1 PE=3 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 3.895e-41
Identity = 82/140 (58.57%), Postives = 100/140 (71.43%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPGQDK--CFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYL 434
            RY+   +LN DPGW  +K+I+SDA VPGEGEHKIM+++R QR     DPNTRH +YGLDADLIMLGLATHE HF +LRE VF   Q    C +CGQ GH A +C+G+ +KK GE DEK   V   KPF +L++  LREYL
Sbjct:  181 RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHDEKDKGVA-LKPFIWLHVAVLREYL 319

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Match: XRN2_ASPFU (5'-3' exoribonuclease 2 OS=Aspergillus fumigatus GN=rat1 PE=3 SV=4)

HSP 1 Score: 164.081 bits (414), Expect = 2.524e-40
Identity = 83/142 (58.45%), Postives = 103/142 (72.54%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVF--TPGQDKCFVCGQMGHMAADCQGKARKKAGEFDE--KGNAVVPKKPFQFLNIWTLREYL 434
            RY+I  +LN DP W  +K+I+SDA VPGEGEHKIM +IR QR     DPNTRH +YGLDADLIMLGLATHE HF +LRE VF        C +CGQ GH A +C+G+A++K GEFDE  KG+++   KPF +L++  LREYL
Sbjct:  180 RYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFDEKQKGSSL---KPFIWLHVSILREYL 318

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Match: C5XGF0_SORBI (Putative uncharacterized protein Sb03g010040 OS=Sorghum bicolor GN=Sb03g010040 PE=4 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.239e-67
Identity = 120/141 (85.11%), Postives = 133/141 (94.33%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYLEY 440
            +YYIHLRLN DPGW  IKVILSDANVPGEGEHKIMSYIR QRNL G +PNTRHCLYGLDADLIML LATHEVHFSILREVV+TPG QDKCF+CGQ+GH+AA+C+GKA++KAGEFDEKG+A+VPKKP+QFLNIWTLREYLEY
Sbjct:  175 QYYIHLRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEFDEKGDAIVPKKPYQFLNIWTLREYLEY 315

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Match: B9H4V3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_715413 PE=4 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 2.759e-67
Identity = 121/142 (85.21%), Postives = 131/142 (92.25%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAV-VPKKPFQFLNIWTLREYLEY 440
            +YYIHLRLN DPGW  IKV+LSDANVPGEGEHK+MSYIRLQRNL G DPNTRHCLYGLDADLIML LATHEVHFSILRE+VFTPG QDKCF+CGQ GH+AA C+GKA++KAGEFDEKGN V VPKKP+QFLNIWTLREYLEY
Sbjct:  175 QYYIHLRLNYDPGWKKIKVVLSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREIVFTPGQQDKCFICGQAGHLAAACEGKAKRKAGEFDEKGNDVAVPKKPYQFLNIWTLREYLEY 316

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Match: B9R871_RICCO (5'->3' exoribonuclease, putative OS=Ricinus communis GN=RCOM_1597380 PE=4 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 6.147e-67
Identity = 119/141 (84.40%), Postives = 131/141 (92.91%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGN-AVVPKKPFQFLNIWTLREYLE 437
            +YYIHLRLNNDPGW  +KVILSDANVPGEGEHK+MSYIRLQRNL G DPNTRHCLYGLDADLIML LATHE+HFSILRE+VFTPG QDKCF+CGQMGH+AADC+GKA++KAGEFDEKG+   V KKP+QFLNIWTLREYLE
Sbjct:  175 QYYIHLRLNNDPGWKKVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEIHFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGDEGAVAKKPYQFLNIWTLREYLE 315

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Match: Q8RV84_ORYSJ (Putative 5-3 exoribonuclease OS=Oryza sativa subsp. japonica GN=OSJNBb0008G24.22 PE=4 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 8.028e-67
Identity = 118/141 (83.69%), Postives = 131/141 (92.91%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYLEY 440
            +YYIHLRLN DPGW  +KVILSDANVPGEGEHKIMSYIR QRNL G +PNTRHCLYGLDADLIML LATHEVHFSILREVV+TPG QDKCF+CGQ+GH+AA+C+GK ++KAGEFDEKG A+VPKKP+QFLNIWTLREYLEY
Sbjct:  175 QYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKKPYQFLNIWTLREYLEY 315

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Match: Q5N739_ORYSJ (Os01g0872700 protein OS=Oryza sativa subsp. japonica GN=P0491F11.16 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 8.028e-67
Identity = 118/141 (83.69%), Postives = 131/141 (92.91%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYLEY 440
            +YYIHLRLN DPGW  +KVILSDANVPGEGEHKIMSYIR QRNL G +PNTRHCLYGLDADLIML LATHEVHFSILREVV+TPG QDKCF+CGQ+GH+AA+C+GK ++KAGEFDEKG A+VPKKP+QFLNIWTLREYLEY
Sbjct:  175 QYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKKPYQFLNIWTLREYLEY 315

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Match: B9EUX3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_04252 PE=4 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 8.028e-67
Identity = 118/141 (83.69%), Postives = 131/141 (92.91%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYLEY 440
            +YYIHLRLN DPGW  +KVILSDANVPGEGEHKIMSYIR QRNL G +PNTRHCLYGLDADLIML LATHEVHFSILREVV+TPG QDKCF+CGQ+GH+AA+C+GK ++KAGEFDEKG A+VPKKP+QFLNIWTLREYLEY
Sbjct:  175 QYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKKPYQFLNIWTLREYLEY 315

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Match: A2WXG4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04616 PE=4 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 8.028e-67
Identity = 118/141 (83.69%), Postives = 131/141 (92.91%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYLEY 440
            +YYIHLRLN DPGW  +KVILSDANVPGEGEHKIMSYIR QRNL G +PNTRHCLYGLDADLIML LATHEVHFSILREVV+TPG QDKCF+CGQ+GH+AA+C+GK ++KAGEFDEKG A+VPKKP+QFLNIWTLREYLEY
Sbjct:  175 QYYIHLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKKPYQFLNIWTLREYLEY 315

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Match: C5YI02_SORBI (Putative uncharacterized protein Sb07g005160 OS=Sorghum bicolor GN=Sb07g005160 PE=4 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.048e-66
Identity = 119/141 (84.40%), Postives = 131/141 (92.91%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYLEY 440
            +YYIH RLN DPGW  IKVILSDANVPGEGEHKIMSYIR QRNL G +PNTRHCLYGLDADLIML LATHEVHFSILREVVFTPG QDKCF+CGQ+GH+AA+C+GKA++KAGE+DEKG A+VPKKP+QFLNIWTLREYLEY
Sbjct:  175 QYYIHQRLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKKPYQFLNIWTLREYLEY 315

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Match: B9GQW9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_754046 PE=4 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 3.859e-61
Identity = 114/140 (81.43%), Postives = 125/140 (89.29%), Query Frame = 3

Query:   27 YIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAV-VPKKPFQFLNIWTLREYLEY 440
            ++ + LN DPGW  IK ILSDANVPGEGEHKIMSYIRLQ NL G +PNTRHCLYGLDADLIML LATHEV FSILRE+VFTPG QDKCF+CGQMGH+AADC+GKA++KAGEFDEKGN V VPKKP+QFLNIW LREYLEY
Sbjct:  167 FMAVLLNYDPGWKKIKAILSDANVPGEGEHKIMSYIRLQSNLPGYNPNTRHCLYGLDADLIMLSLATHEVLFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGNDVAVPKKPYQFLNIWILREYLEY 306

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Match: D7MS35_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_917497 PE=4 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.982e-57
Identity = 106/142 (74.65%), Postives = 122/142 (85.92%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGE-FDEKGNAVVPKKPFQFLNIWTLREYLEY 440
            RYYIH+RLN+DPGW NIKVILSDANVPGEGEHKIMSYIR  +N  G +PNT HCLYGLDADLIML LATHE+HFSILREVVF PG +DKCF+CGQ+GH AADC+GK ++KAGE  D+    VV KKP++F+NIW LREYLE+
Sbjct:  176 RYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILREVVFFPGEEDKCFLCGQVGHRAADCEGKMKRKAGEMLDDTEADVVVKKPYEFVNIWILREYLEH 317

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TAIR peptide
Match: AT1G75660.1 (| Symbols: XRN3, AtXRN3 | 5'-3' exoribonuclease 3 | chr1:28408289-28414825 FORWARD LENGTH=1020)

HSP 1 Score: 236.884 bits (603), Expect = 3.685e-63
Identity = 112/141 (79.43%), Postives = 127/141 (90.07%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNA-VVPKKPFQFLNIWTLREYLE 437
            +YY+HLRLN+D GW NIKVILSDANVPGEGEHKIMSYIRLQRNL G DPNTRHCLYGLDADLIMLGLATHEVHFSILREVV+TPG Q++CF+CGQMGH A++C+GK +K+AGE DEKG+     KKP+QFL+IW LREYLE
Sbjct:  175 QYYVHLRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKKPYQFLHIWVLREYLE 315

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TAIR peptide
Match: AT5G42540.2 (| Symbols: XRN2 | exoribonuclease 2 | chr5:17007513-17014534 FORWARD LENGTH=1023)

HSP 1 Score: 220.32 bits (560), Expect = 3.570e-58
Identity = 104/142 (73.24%), Postives = 120/142 (84.51%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPGQD-KCFVCGQMGHMAADCQGKARKKAGEFDEKGNA-VVPKKPFQFLNIWTLREYLEY 440
            RYYIH+RLN+DPGW NIKVILSDANVPGEGEHKIMSYIR  +N  G +PNT HCLYGLDADLIML LATHE+HFSILREVVF PG++ KCF+CGQ GH AADC+GK ++K GE  +   A VV KKP++F+NIW LREYLE+
Sbjct:  177 RYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILREYLEH 318

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TAIR peptide
Match: AT5G42540.1 (| Symbols: XRN2, AtXRN2 | exoribonuclease 2 | chr5:17007513-17014534 FORWARD LENGTH=1012)

HSP 1 Score: 220.32 bits (560), Expect = 3.570e-58
Identity = 104/142 (73.24%), Postives = 120/142 (84.51%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPGQD-KCFVCGQMGHMAADCQGKARKKAGEFDEKGNA-VVPKKPFQFLNIWTLREYLEY 440
            RYYIH+RLN+DPGW NIKVILSDANVPGEGEHKIMSYIR  +N  G +PNT HCLYGLDADLIML LATHE+HFSILREVVF PG++ KCF+CGQ GH AADC+GK ++K GE  +   A VV KKP++F+NIW LREYLE+
Sbjct:  177 RYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILREYLEH 318

[Close]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TAIR peptide
Match: AT1G54490.1 (| Symbols: AIN1, EIN5, XRN4, ATXRN4 | exoribonuclease 4 | chr1:20350300-20356650 FORWARD LENGTH=947)

HSP 1 Score: 207.608 bits (527), Expect = 2.394e-54
Identity = 100/141 (70.92%), Postives = 114/141 (80.85%), Query Frame = 3

Query:   21 RYYIHLRLNNDPGWTNIKVILSDANVPGEGEHKIMSYIRLQRNLEGCDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPG-QDKCFVCGQMGHMAADCQGKARKKAGEFDEKGNAVVPKKPFQFLNIWTLREYLEY 440
            +YYI  RLN++PGW  +KVILSD+NVPGEGEHKIMSYIRLQRNL G DPNTRHCLYGLDADLIML LATHEVHFSILREV+  PG Q+KCFVCGQ GH A+DC G    K+G  +   +  + KK +QFLNIW LREYL+Y
Sbjct:  176 QYYIQSRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPG----KSGSNNAAADIPIHKKKYQFLNIWVLREYLQY 312

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig1057 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig1057 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
XRN3_ARATH	3.064e-62	79.43	5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN...	[more]
XRN2_ARATH	2.968e-57	73.24	5'-3' exoribonuclease 2 OS=Arabidopsis thaliana GN...	[more]
XRN4_ARATH	1.991e-53	70.92	5'-3' exoribonuclease 4 OS=Arabidopsis thaliana GN...	[more]
XRN2_NEUCR	4.915e-44	62.68	5'-3' exoribonuclease 2 OS=Neurospora crassa GN=ra...	[more]
XRN2_CHAGB	7.847e-42	60.71	5'-3' exoribonuclease 2 OS=Chaetomium globosum GN=...	[more]
XRN2_USTMA	1.339e-41	58.16	5'-3' exoribonuclease 2 OS=Ustilago maydis GN=RAT1...	[more]
XRN2_ASPOR	1.748e-41	58.57	5'-3' exoribonuclease 2 OS=Aspergillus oryzae GN=r...	[more]
XRN2_EMENI	2.982e-41	59.29	5'-3' exoribonuclease 2 OS=Emericella nidulans GN=...	[more]
XRN2_GIBZE	3.895e-41	58.57	5'-3' exoribonuclease 2 OS=Gibberella zeae GN=RAT1...	[more]
XRN2_ASPFU	2.524e-40	58.45	5'-3' exoribonuclease 2 OS=Aspergillus fumigatus G...	[more]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C5XGF0_SORBI	1.239e-67	85.11	Putative uncharacterized protein Sb03g010040 OS=So...	[more]
B9H4V3_POPTR	2.759e-67	85.21	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9R871_RICCO	6.147e-67	84.40	5'->3' exoribonuclease, putative OS=Ricinus commun...	[more]
Q8RV84_ORYSJ	8.028e-67	83.69	Putative 5-3 exoribonuclease OS=Oryza sativa subsp...	[more]
Q5N739_ORYSJ	8.028e-67	83.69	Os01g0872700 protein OS=Oryza sativa subsp. japoni...	[more]
B9EUX3_ORYSJ	8.028e-67	83.69	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A2WXG4_ORYSI	8.028e-67	83.69	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C5YI02_SORBI	1.048e-66	84.40	Putative uncharacterized protein Sb07g005160 OS=So...	[more]
B9GQW9_POPTR	3.859e-61	81.43	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7MS35_ARALY	1.982e-57	74.65	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of Cicer_arietinum_v1_Contig1057 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G75660.1	3.685e-63	79.43	\| Symbols: XRN3, AtXRN3 \| 5'-3' exoribonuclease 3 ...	[more]
AT5G42540.2	3.570e-58	73.24	\| Symbols: XRN2 \| exoribonuclease 2 \| chr5:1700751...	[more]
AT5G42540.1	3.570e-58	73.24	\| Symbols: XRN2, AtXRN2 \| exoribonuclease 2 \| chr5...	[more]
AT1G54490.1	2.394e-54	70.92	\| Symbols: AIN1, EIN5, XRN4, ATXRN4 \| exoribonucle...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 94..108 score: 1.1
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	no description	coord: 94..110 score: 0.0
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 94..108 score: 9
IPR004859	Putative 5-3 exonuclease	PFAM	PF03159	XRN_N	coord: 7..86 score: 6.5
IPR013084	Zinc finger, CCHC retroviral-type	GENE3D	4.10.60.10	no description	coord: 92..115 score: 0.0
None	No IPR available	PANTHER	PTHR12341	5'->3' EXORIBONUCLEASE	coord: 7..145 score: 9.7

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig1057 ID=Cicer_arietinum_v1_Contig1057; Name=Cicer_arietinum_v1_Contig1057; organism=Cicer arietinum; type=contig; length=455bp
GATTAGCGTGGTCGCGGCCGAGGTACTATATTCATCTTAGGTTGAATAAT
GATCCCGGTTGGACAAATATCAAGGTTATTCTTTCTGATGCAAATGTTCC
TGGTGAAGGGGAGCATAAGATTATGTCCTATATTCGCCTTCAAAGAAATC
TTGAGGGATGTGATCCGAATACACGACATTGCCTGTATGGTTTGGATGCT
GATTTGATTATGTTGGGTCTTGCTACTCATGAAGTTCATTTTTCAATTCT
TAGAGAGGTTGTATTTACTCCTGGACAAGATAAATGCTTCGTGTGCGGTC
AGATGGGTCATATGGCTGCAGACTGTCAAGGAAAGGCAAGAAAGAAAGCA
GGAGAATTTGATGAAAAAGGCAATGCTGTTGTTCCTAAAAAGCCGTTCCA
GTTTCTGAACATCTGGACTCTGAGGGAATATCTGGAGTACCTGGCCCGGG
CGGCC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding
GO:0004527	exonuclease activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure

Vocabulary: **INTERPRO**
Term	Definition
IPR001878	Znf_CCHC
IPR004859	Xrn1_N
IPR013084	Zinc finger, CCHC retroviral-type

Search form

Cicer_arietinum_v1_Contig1057