Cicer_arietinum_v1_Contig1060

Contig Overview


Name	Cicer_arietinum_v1_Contig1060
Unique Name	Cicer_arietinum_v1_Contig1060
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	448

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR914531	EST	GR914531:42..273 +	Cicer arietinum unigene v1	n/a
GR913973	EST	GR913973:8..311 +	Cicer arietinum unigene v1	n/a
GR911943	EST	GR911943:106..305 +	Cicer arietinum unigene v1	n/a
GR914702	EST	GR914702:8..438 +	Cicer arietinum unigene v1	n/a
GR913744	EST	GR913744:8..434 +	Cicer arietinum unigene v1	n/a
GR914442	EST	GR914442:1..448 -	Cicer arietinum unigene v1	n/a
GR914722	EST	GR914722:253..437 -	Cicer arietinum unigene v1	n/a
GR914815	EST	GR914815:87..436 +	Cicer arietinum unigene v1	n/a
GR914414	EST	GR914414:87..436 +	Cicer arietinum unigene v1	n/a
GR911916	EST	GR911916:113..439 -	Cicer arietinum unigene v1	n/a
GR913992	EST	GR913992:72..439 -	Cicer arietinum unigene v1	n/a
GR911979	EST	GR911979:10..434 -	Cicer arietinum unigene v1	n/a
GR911874	EST	GR911874:114..434 -	Cicer arietinum unigene v1	n/a
GR914727	EST	GR914727:12..448 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR914531	GR914531	Cicer arietinum	EST
GR913973	GR913973	Cicer arietinum	EST
GR911943	GR911943	Cicer arietinum	EST
GR914702	GR914702	Cicer arietinum	EST
GR913744	GR913744	Cicer arietinum	EST
GR914442	GR914442	Cicer arietinum	EST
GR914722	GR914722	Cicer arietinum	EST
GR914815	GR914815	Cicer arietinum	EST
GR914414	GR914414	Cicer arietinum	EST
GR911916	GR911916	Cicer arietinum	EST
GR913992	GR913992	Cicer arietinum	EST
GR911979	GR911979	Cicer arietinum	EST
GR911874	GR911874	Cicer arietinum	EST
GR914727	GR914727	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 2.254e-54
Identity = 101/122 (82.79%), Postives = 114/122 (93.44%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            +TL  DGRRV VIERDL+E DRIVGELLQPGGYLKL+ELGLEDCVN IDAQ+VFGYAL+ DGK+TRLSYPL+KFHSDV+GRSFHNGRF+QRMREKAASLPNV +EQGTVTSL E+KG++KGV
Sbjct:   91 YTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYALYMDGKNTRLSYPLEKFHSDVAGRSFHNGRFVQRMREKAASLPNVRMEQGTVTSLVEKKGSVKGV 212

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 2.265e-38
Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLD--KFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            + L KDGRRV VIERDL EP+RI+GE +QPGG L L +LGLEDC+  IDAQ+  G  ++KDGK    S+P+D   F  D S RSFHNGRF+QR+R+KA+SLPNV LE+GTV SL EEKG IKGV
Sbjct:   62 YALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGV 185

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 9.514e-37
Identity = 76/123 (61.79%), Postives = 94/123 (76.42%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLD-KFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            + L KDGRRV VIERD+ EP R++GE +QPGG L L +LGL+DC+  IDAQ+  G  LFKDGK T   +P+D  F  + SGR FHNGRF+QR+R+KA+SLPNV LE+GTV SL EEKG +KGV
Sbjct:   65 YALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRLFKDGKETVACFPVDTNFPYEPSGRFFHNGRFVQRLRQKASSLPNVRLEEGTVRSLIEEKGVVKGV 187

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.997e-35
Identity = 72/124 (58.06%), Postives = 93/124 (75.00%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLD--KFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            + L KDGRRV VIERD+ EP+R++GE +QPGG L L +LGL+DC+ +IDAQ+  G A++KDGK     +P+D   F  + S RSFHNGRF+Q++R KA SL NV LE+GTV SL EEKG +KGV
Sbjct:   62 YALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKGVVKGV 185

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.419e-34
Identity = 72/123 (58.54%), Postives = 93/123 (75.61%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDK-FHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            + L KDGRRV VIERD+ EP R++GE +QPGG L L +LGLEDC+  ID Q   G A++KDG+   +S+P D  F  + +GR+F+NGRF+QR+R+KA+SLP V LE+GTV SL EEKG IKGV
Sbjct:   64 YALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAVYKDGQKALVSFPEDNDFPYEPTGRAFYNGRFVQRLRQKASSLPTVQLEEGTVKSLIEEKGVIKGV 186

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 5.772e-34
Identity = 72/123 (58.54%), Postives = 89/123 (72.36%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDK-FHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            + L KDGRRV VIERDL EP R +GEL+Q GG   L +LGLEDC+ +IDAQ+    A++KDGKH  L +P DK F  +  GR   NGR +QR+R+KAASL NV LE+GTV SL EE+G +KGV
Sbjct:   60 YALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLSNVQLEEGTVKSLIEEEGVVKGV 182

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 3.750e-25
Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 3

Query:   57 LGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALF--KDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            L +DGR+V VIERDL EPDRIVGE LQPGGY  L +LGL D V  +DAQ V GY +   +     ++ YPL + +   SGR+FH+GRFI  +R+ A + PN    +G V  L EE   + GV
Sbjct:  142 LSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGV 263

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.898e-25
Identity = 59/122 (48.36%), Postives = 78/122 (63.93%), Query Frame = 3

Query:   57 LGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYAL--FKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            L +DGR+V VIERDL EPDRIVGELLQPGGY  L ELGL D V  ++A  + GY +  ++     ++ YPL + +   SG +FH+GRFI  +R+ A + PNV   +G V  L EE   + GV
Sbjct:  140 LSRDGRKVTVIERDLKEPDRIVGELLQPGGYRVLQELGLGDTVEGLNAHHIHGYIVHDYESRSEVQIPYPLSETNQVQSGIAFHHGRFIMSLRKAAMAEPNVKFIEGVVLQLLEEDDAVIGV 261

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.334e-22
Identity = 55/122 (45.08%), Postives = 76/122 (62.30%), Query Frame = 3

Query:   57 LGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALF--KDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            L +DGR V VIERDL EPDRI+GE LQPGGY  L ELGL D V +++A  + GY +   +     ++ YP+ + +   SG +FH+G+FI  +R+ A + PNV   +G V  L EE   + GV
Sbjct:  141 LSRDGRTVTVIERDLKEPDRILGECLQPGGYRVLRELGLGDTVESLNAHHIHGYVIHDCESRSEVQIPYPVSENNQVQSGVAFHHGKFIMSLRKAAMAEPNVKFIEGVVLRLLEEDDAVIGV 262

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.275e-22
Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 3

Query:   57 LGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTS-LHEEKGTI 407
            LG+ GR+VLV+ERD+SEPDRIVGELLQPGG   L ++G+ D V  ID Q   GY +F    +  + YP         G  FH GRF+  +R+   S PNV + + TV   L +E G +
Sbjct:   24 LGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIADAVEGIDGQWTSGYQIFYGDSNVSVPYPSKPNGGAYQGIGFHYGRFVMNLRKALTSTPNVTVTEATVNELLRDETGEV 141

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Match: Q8GSM9_MEDTR (Squalene monooxygenase 2 OS=Medicago truncatula GN=sqp2 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.645e-59
Identity = 113/122 (92.62%), Postives = 119/122 (97.54%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            HTLGKDGRRV +IERDLSEPDRIVGELLQPGGYLKLVELGL+DCV+NIDAQ+VFGYALFKDGKHTRLSYPL+KFHSDVSGRSFHNGRFIQRMREKAASLPNVN+EQGTV SL EEKGTIKGV
Sbjct:   76 HTLGKDGRRVHIIERDLSEPDRIVGELLQPGGYLKLVELGLQDCVDNIDAQRVFGYALFKDGKHTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVNMEQGTVISLLEEKGTIKGV 197

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Match: Q2HY08_MEDSA (Squalene epoxidase OS=Medicago sativa GN=SE1 PE=4 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.645e-59
Identity = 113/122 (92.62%), Postives = 119/122 (97.54%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            HTLGKDGRRV +IERDLSEPDRIVGELLQPGGYLKLVELGL+DCV+NIDAQ+VFGYALFKDGKHTRLSYPL+KFHSDVSGRSFHNGRFIQRMREKAASLPNVN+EQGTV SL EEKGTIKGV
Sbjct:   74 HTLGKDGRRVHIIERDLSEPDRIVGELLQPGGYLKLVELGLQDCVDNIDAQRVFGYALFKDGKHTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVNMEQGTVISLLEEKGTIKGV 195

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Match: B9GNL3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_411973 PE=4 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.626e-57
Identity = 109/122 (89.34%), Postives = 116/122 (95.08%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            HTLGKDGRRV VIERDL+EPDRIVGELLQPGGYLKL+ELGLEDCV  IDAQ+VFGYALFKDG HTRLSYPL+KFHSDV+GRSFHNGRFIQRMREKA SLPNV+LEQGTVTSL EEKGTI+GV
Sbjct:   16 HTLGKDGRRVRVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVEKIDAQKVFGYALFKDGMHTRLSYPLEKFHSDVAGRSFHNGRFIQRMREKAVSLPNVHLEQGTVTSLLEEKGTIRGV 137

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Match: Q8GSM8_MEDTR (Squalene monooxygenase 1 OS=Medicago truncatula GN=sqp1 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 9.977e-57
Identity = 107/122 (87.70%), Postives = 116/122 (95.08%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            +TLGKDGRRVL+IERDL+EPDRIVGELLQPGGYLKL+ELGL+DCV  IDAQ+VFGYALFKDGKHTRLSYPL+KFHSD++GRSFHNGRFI RMREKAASLPNV LEQGTVTSL EE GTIKGV
Sbjct:   71 YTLGKDGRRVLIIERDLNEPDRIVGELLQPGGYLKLIELGLDDCVEKIDAQKVFGYALFKDGKHTRLSYPLEKFHSDIAGRSFHNGRFILRMREKAASLPNVRLEQGTVTSLLEENGTIKGV 192

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Match: Q506K3_DATIN (Squalene monooxygenase OS=Datura inoxia PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 4.952e-56
Identity = 109/122 (89.34%), Postives = 114/122 (93.44%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            HTLGK+GRRV VIERDL+EPDRIVGELLQPGGYLKL ELGLEDCV  IDAQ+VFGYALFKDGK TRLSYPL+KFHSDV+GRSFHNGRFIQRMREKAASLPNV LEQGTVTSL EE GTIKGV
Sbjct:   79 HTLGKEGRRVKVIERDLTEPDRIVGELLQPGGYLKLQELGLEDCVEKIDAQRVFGYALFKDGKSTRLSYPLEKFHSDVAGRSFHNGRFIQRMREKAASLPNVKLEQGTVTSLLEENGTIKGV 200

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Match: D3YM76_9SOLA (Squalene epoxidase OS=Withania somnifera PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 4.952e-56
Identity = 109/122 (89.34%), Postives = 114/122 (93.44%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            HTLGK+GRRV VIERDL+EPDRIVGELLQPGGYLKL ELGLEDCV  IDAQ+VFGYALFKDGK TRLSYPL+KFHSDVSGRSFHNGRFIQRMREKAASLPNV LEQGTVTSL EE GTI+GV
Sbjct:   81 HTLGKEGRRVKVIERDLTEPDRIVGELLQPGGYLKLQELGLEDCVEKIDAQRVFGYALFKDGKSTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVKLEQGTVTSLLEENGTIRGV 202

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Match: B9R6V0_RICCO (Squalene monooxygenase, putative OS=Ricinus communis GN=RCOM_1585750 PE=4 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 8.446e-56
Identity = 106/122 (86.89%), Postives = 115/122 (94.26%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            HTLGKDGRRV VIERDL+EPDRIVGELLQPGGYLKL+ELGLEDCV  IDAQ+VFGYALF DGKHT+LSYPL+KFHSDV+GRSFHNGRFIQRMREKA+S+PNV LEQGTVTSL EEKG I+GV
Sbjct:   84 HTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVEEIDAQRVFGYALFMDGKHTQLSYPLEKFHSDVAGRSFHNGRFIQRMREKASSIPNVRLEQGTVTSLIEEKGIIRGV 205

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Match: B9SX91_RICCO (Squalene monooxygenase, putative OS=Ricinus communis GN=RCOM_0859900 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.882e-55
Identity = 107/122 (87.70%), Postives = 115/122 (94.26%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            +TLGKDGRRV VIERDL+EPDRIVGELLQPGGYLKL+ELGLEDCV  IDAQ+V GYALFKDGK+TRLSYPL+KFH+DV+GRSFHNGRFIQRMREKAASLPNV LEQGTVTSL EE GTIKGV
Sbjct:  184 YTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVQEIDAQRVLGYALFKDGKNTRLSYPLEKFHADVAGRSFHNGRFIQRMREKAASLPNVKLEQGTVTSLLEENGTIKGV 305

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Match: B9H6N5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831444 PE=4 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.458e-55
Identity = 105/122 (86.07%), Postives = 115/122 (94.26%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            HTLGKDGR+V VIERDL+EPDRIVGE LQPGGYLKL+ELGLEDCV  IDAQ+VFGYALFKDGKHTRLSYPL+KFHS+V+GRSFHNGRFIQRMR+KAASLPNV LEQGTV SL E+KGTI+GV
Sbjct:   78 HTLGKDGRQVHVIERDLTEPDRIVGEFLQPGGYLKLIELGLEDCVEKIDAQRVFGYALFKDGKHTRLSYPLEKFHSNVAGRSFHNGRFIQRMRDKAASLPNVQLEQGTVISLLEDKGTIRGV 199

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Match: D7UE80_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_525.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007278001 PE=4 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.210e-55
Identity = 106/122 (86.89%), Postives = 114/122 (93.44%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            HTLGKDGRRV +IERDL+EPDRIVGELLQPGGYLKL+ELGLEDCV  IDAQ+V GYALFKDGK+TRLSYPL+KFHSDV+GRSFHNGRFIQRMREKAASL NV +EQGTVTSL EE GTIKGV
Sbjct:   74 HTLGKDGRRVHIIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVEEIDAQRVLGYALFKDGKNTRLSYPLEKFHSDVAGRSFHNGRFIQRMREKAASLSNVRMEQGTVTSLLEENGTIKGV 195

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TAIR peptide
Match: AT4G37760.1 (| Symbols: SQE3 | squalene epoxidase 3 | chr4:17744085-17746426 FORWARD LENGTH=525)

HSP 1 Score: 211.846 bits (538), Expect = 1.206e-55
Identity = 102/122 (83.61%), Postives = 113/122 (92.62%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            HTLGK+GRRV VIERDL+EPDRIVGELLQPGGYLKL+ELGLEDCV +IDAQ+V GYALFKDGKHT+LSYPLD+F SDV+GRSFHNGRF+QRMREKA+ LPNV +EQGTVTSL EE G IKGV
Sbjct:   71 HTLGKEGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVKDIDAQRVLGYALFKDGKHTKLSYPLDQFDSDVAGRSFHNGRFVQRMREKASLLPNVRMEQGTVTSLVEENGIIKGV 192

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TAIR peptide
Match: AT1G58440.1 (| Symbols: XF1, SQE1 | FAD/NAD(P)-binding oxidoreductase family protein | chr1:21714094-21717246 REVERSE LENGTH=531)

HSP 1 Score: 208.764 bits (530), Expect = 1.021e-54
Identity = 103/122 (84.43%), Postives = 111/122 (90.98%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            +TLGKD RRV VIERDLSEPDRIVGELLQPGGYLKL+ELG+EDCV  IDAQ+V+GYALFK+GK  RL+YPL+KFH DVSGRSFHNGRFIQRMREKAASLPNV LEQGTV SL EE GTIKGV
Sbjct:   77 YTLGKDKRRVHVIERDLSEPDRIVGELLQPGGYLKLLELGIEDCVEEIDAQRVYGYALFKNGKRIRLAYPLEKFHEDVSGRSFHNGRFIQRMREKAASLPNVQLEQGTVLSLLEENGTIKGV 198

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TAIR peptide
Match: AT2G22830.1 (| Symbols: SQE2 | squalene epoxidase 2 | chr2:9723947-9726270 REVERSE LENGTH=585)

HSP 1 Score: 202.986 bits (515), Expect = 5.603e-53
Identity = 99/122 (81.15%), Postives = 108/122 (88.52%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDKFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            HTLGK+GRRV VIERD SE DRIVGELLQPGGYLKL+ELGLEDCV  IDAQ+V GY LFKDGKHT+L+YPL+ F SDV+GRSFHNGRF+QRMREKA +L NV LEQGTVTSL EE GTIKGV
Sbjct:  139 HTLGKEGRRVHVIERDFSEQDRIVGELLQPGGYLKLIELGLEDCVKKIDAQRVLGYVLFKDGKHTKLAYPLETFDSDVAGRSFHNGRFVQRMREKALTLSNVRLEQGTVTSLLEEHGTIKGV 260

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TAIR peptide
Match: AT5G24150.2 (| Symbols: SQP1 | FAD/NAD(P)-binding oxidoreductase family protein | chr5:8172670-8175395 REVERSE LENGTH=490)

HSP 1 Score: 157.532 bits (397), Expect = 2.699e-39
Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLD--KFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            + L KDGRRV VIERDL EP+RI+GE +QPGG L L +LGLEDC+  IDAQ+  G  ++KDGK    S+P+D   F  D S RSFHNGRF+QR+R+KA+SLPNV LE+GTV SL EEKG IKGV
Sbjct:   62 YALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGV 185

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TAIR peptide
Match: AT5G24150.1 (| Symbols: SQP1, SQE5 | FAD/NAD(P)-binding oxidoreductase family protein | chr5:8172594-8175395 REVERSE LENGTH=516)

HSP 1 Score: 157.532 bits (397), Expect = 2.699e-39
Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLD--KFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            + L KDGRRV VIERDL EP+RI+GE +QPGG L L +LGLEDC+  IDAQ+  G  ++KDGK    S+P+D   F  D S RSFHNGRF+QR+R+KA+SLPNV LE+GTV SL EEKG IKGV
Sbjct:   62 YALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGV 185

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TAIR peptide
Match: AT5G24160.1 (| Symbols: SQE6 | squalene monoxygenase 6 | chr5:8183291-8186601 REVERSE LENGTH=517)

HSP 1 Score: 146.747 bits (369), Expect = 4.765e-36
Identity = 72/124 (58.06%), Postives = 93/124 (75.00%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLD--KFHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            + L KDGRRV VIERD+ EP+R++GE +QPGG L L +LGL+DC+ +IDAQ+  G A++KDGK     +P+D   F  + S RSFHNGRF+Q++R KA SL NV LE+GTV SL EEKG +KGV
Sbjct:   62 YALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKGVVKGV 185

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TAIR peptide
Match: AT5G24140.1 (| Symbols: SQP2 | squalene monooxygenase 2 | chr5:8164547-8167669 REVERSE LENGTH=516)

HSP 1 Score: 142.895 bits (359), Expect = 6.881e-35
Identity = 72/123 (58.54%), Postives = 89/123 (72.36%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLEDCVNNIDAQQVFGYALFKDGKHTRLSYPLDK-FHSDVSGRSFHNGRFIQRMREKAASLPNVNLEQGTVTSLHEEKGTIKGV 416
            + L KDGRRV VIERDL EP R +GEL+Q GG   L +LGLEDC+ +IDAQ+    A++KDGKH  L +P DK F  +  GR   NGR +QR+R+KAASL NV LE+GTV SL EE+G +KGV
Sbjct:   60 YALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLSNVQLEEGTVKSLIEEEGVVKGV 182

[Close]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TAIR peptide
Match: AT5G24155.1 (| Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr5:8180118-8181016 REVERSE LENGTH=121)

HSP 1 Score: 60.077 bits (144), Expect = 5.866e-10
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 3

Query:   51 HTLGKDGRRVLVIERDLSEPDRIVGELLQPGGYLKLVELGLE 176
            ++L KDGRRVL IERD+ EP+R++GE +QPGG L L +LGLE
Sbjct:   64 YSLAKDGRRVLAIERDMREPERMMGEFMQPGGRLMLSKLGLE 105

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig1060 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig1060 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
ERG1_PANGI	2.254e-54	82.79	Squalene monooxygenase OS=Panax ginseng PE=2 SV=1	[more]
ERG11_ARATH	2.265e-38	63.71	Squalene monooxygenase 1,1 OS=Arabidopsis thaliana...	[more]
ERG12_BRANA	9.514e-37	61.79	Squalene monooxygenase 1,2 OS=Brassica napus GN=SQ...	[more]
ERG12_ARATH	3.997e-35	58.06	Squalene monooxygenase 1,2 OS=Arabidopsis thaliana...	[more]
ERG11_BRANA	4.419e-34	58.54	Squalene monooxygenase 1,1 OS=Brassica napus GN=SQ...	[more]
ERG13_ARATH	5.772e-34	58.54	Squalene monooxygenase 2 OS=Arabidopsis thaliana G...	[more]
ERG1_HUMAN	3.750e-25	49.18	Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=...	[more]
ERG1_MOUSE	4.898e-25	48.36	Squalene monooxygenase OS=Mus musculus GN=Sqle PE=...	[more]
ERG1_RAT	1.334e-22	45.08	Squalene monooxygenase OS=Rattus norvegicus GN=Sql...	[more]
ERG1_SCHPO	2.275e-22	44.92	Probable squalene monooxygenase OS=Schizosaccharom...	[more]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q8GSM9_MEDTR	1.645e-59	92.62	Squalene monooxygenase 2 OS=Medicago truncatula GN...	[more]
Q2HY08_MEDSA	1.645e-59	92.62	Squalene epoxidase OS=Medicago sativa GN=SE1 PE=4 ...	[more]
B9GNL3_POPTR	2.626e-57	89.34	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
Q8GSM8_MEDTR	9.977e-57	87.70	Squalene monooxygenase 1 OS=Medicago truncatula GN...	[more]
Q506K3_DATIN	4.952e-56	89.34	Squalene monooxygenase OS=Datura inoxia PE=2 SV=1	[more]
D3YM76_9SOLA	4.952e-56	89.34	Squalene epoxidase OS=Withania somnifera PE=2 SV=1	[more]
B9R6V0_RICCO	8.446e-56	86.89	Squalene monooxygenase, putative OS=Ricinus commun...	[more]
B9SX91_RICCO	1.882e-55	87.70	Squalene monooxygenase, putative OS=Ricinus commun...	[more]
B9H6N5_POPTR	2.458e-55	86.07	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7UE80_VITVI	3.210e-55	86.89	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of Cicer_arietinum_v1_Contig1060 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 8


Match Name	E-value	Identity	Description
AT4G37760.1	1.206e-55	83.61	\| Symbols: SQE3 \| squalene epoxidase 3 \| chr4:1774...	[more]
AT1G58440.1	1.021e-54	84.43	\| Symbols: XF1, SQE1 \| FAD/NAD(P)-binding oxidored...	[more]
AT2G22830.1	5.603e-53	81.15	\| Symbols: SQE2 \| squalene epoxidase 2 \| chr2:9723...	[more]
AT5G24150.2	2.699e-39	63.71	\| Symbols: SQP1 \| FAD/NAD(P)-binding oxidoreductas...	[more]
AT5G24150.1	2.699e-39	63.71	\| Symbols: SQP1, SQE5 \| FAD/NAD(P)-binding oxidore...	[more]
AT5G24160.1	4.765e-36	58.06	\| Symbols: SQE6 \| squalene monoxygenase 6 \| chr5:8...	[more]
AT5G24140.1	6.881e-35	58.54	\| Symbols: SQP2 \| squalene monooxygenase 2 \| chr5:...	[more]
AT5G24155.1	5.866e-10	64.29	\| Symbols: \| FAD/NAD(P)-binding oxidoreductase fa...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.50.50.60	no description	coord: 10..138 score: 1.3
None	No IPR available	SEG	seg	seg	coord: 5..16 score
None	No IPR available	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 2..138 score: 3.6

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig1060 ID=Cicer_arietinum_v1_Contig1060; Name=Cicer_arietinum_v1_Contig1060; organism=Cicer arietinum; type=contig; length=448bp
GGAATTCGATTAGCGTGGTCGCGGCCGAGGTCGCTGGCGCTGCACTCGCT
CACACTCTCGGCAAGGATGGACGCCGAGTGCTTGTCATTGAAAGAGATCT
GAGTGAGCCTGATAGAATTGTTGGAGAGTTGCTACAACCTGGCGGCTATC
TCAAATTAGTTGAACTGGGCCTTGAAGATTGTGTGAACAATATTGATGCG
CAGCAAGTGTTTGGTTATGCACTTTTCAAAGATGGGAAACATACTCGTCT
CTCTTATCCCTTGGATAAGTTTCACTCAGATGTATCTGGCAGAAGCTTTC
ACAATGGCCGTTTTATTCAGAGAATGCGAGAGAAGGCTGCTTCCCTTCCC
AATGTAAATTTGGAGCAAGGAACAGTCACTTCCCTACATGAAGAGAAGGG
GACAATCAAAGGTGTACCTCGGCCGCGACCACGCTAGAAATCACTAGT

Search form

Cicer_arietinum_v1_Contig1060