Cicer_arietinum_v1_Contig1068
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Cicer_arietinum_v1_Contig1068 vs. TrEMBL
Match: D7SWJ4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022400001 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.700e-12 Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 37 LTTDEQIMLKDVSNRIRVRGISKSLDFDNVKMGLTDNKRMIKXXXXXXXXRNKELS-FNRICSKLPVIDFGIDKNRALDVIDRVAVAR 297 LT +Q ML+++S + R ISKSLDFD+VK GL + R+ K +KEL+ R S LPVIDFGIDK +ALDVIDRV R Sbjct: 481 LTEKDQEMLQNMSKKKRASRISKSLDFDSVKTGLRKHNRLSKSGSYSPTRGSKELAPVTRFSSGLPVIDFGIDKKKALDVIDRVDTVR 568
BLAST of Cicer_arietinum_v1_Contig1068 vs. TrEMBL
Match: D7SSB0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_76.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034887001 PE=4 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 5.117e-9 Identity = 41/95 (43.16%), Postives = 53/95 (55.79%), Query Frame = 1 Query: 16 PGQVPQSLTTDEQIMLKDVSNRIRVRGISKSLDFDNVKMGLTDNKRMIKXXXXXXXXRNKELSFN-RICSKLPVIDFGIDKNRALDVIDRVAVAR 297 P LT ++Q ML+DVS R GISKS +FD K L+ + R+ K K+ F+ R S +PVIDF ID+ +ALDVIDRV R Sbjct: 557 PNSPSPMLTIEDQEMLRDVSKRKLTPGISKSQEFDTAKTRLSKHHRLSKSSSHSPTSETKKELFSIRRPSSVPVIDFDIDRIKALDVIDRVDTIR 651
BLAST of Cicer_arietinum_v1_Contig1068 vs. TrEMBL
Match: B9T700_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0956920 PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.489e-8 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 10 RPPGQVPQSLTTDEQIMLKDVSNRIRVRGISKSLDFDNVKMGLTDNKRMIKXXXXXXXXRNKELSFN-RICSKLPVIDFGIDKNRALDVIDRVAVAR 297 +P +P LT ++Q ML+DV R + GISKS +FD K L + R+ K K+ F R S +PVIDF ID+ +ALDVIDRV R Sbjct: 540 KPSSPLPM-LTVEDQEMLRDVPKRKKTPGISKSQEFDTAKTRLCKHHRLSKSSSHSPMTETKKDPFPIRRPSSVPVIDFDIDRIKALDVIDRVDTIR 635
BLAST of Cicer_arietinum_v1_Contig1068 vs. TrEMBL
Match: Q9XID5_ARATH (F23M19.3 OS=Arabidopsis thaliana GN=F23M19.3 PE=4 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 9.651e-8 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 37 LTTDEQIMLKDVSNRIRVRGISKSLDFDNV-KMGLTDNKRMIK----XXXXXXXXRNKELSFN-RICSKLPVIDFGIDKNRALDVIDRVAVAR 297 LTT++Q ML+DVS R + GISKS +F+ V K L + R+ K +NK+ +F+ R S +P+IDF ID+ +ALDVIDRV R Sbjct: 515 LTTEDQEMLRDVSKRRKTPGISKSQEFETVAKARLCKHHRLSKSSSHSPMMGEMMKNKKDTFSTRRPSSVPIIDFDIDRMKALDVIDRVDTIR 607
BLAST of Cicer_arietinum_v1_Contig1068 vs. TrEMBL
Match: Q6NQ48_ARATH (At1g34320 OS=Arabidopsis thaliana GN=At1g34320 PE=1 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 9.651e-8 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 37 LTTDEQIMLKDVSNRIRVRGISKSLDFDNV-KMGLTDNKRMIK----XXXXXXXXRNKELSFN-RICSKLPVIDFGIDKNRALDVIDRVAVAR 297 LTT++Q ML+DVS R + GISKS +F+ V K L + R+ K +NK+ +F+ R S +P+IDF ID+ +ALDVIDRV R Sbjct: 563 LTTEDQEMLRDVSKRRKTPGISKSQEFETVAKARLCKHHRLSKSSSHSPMMGEMMKNKKDTFSTRRPSSVPIIDFDIDRMKALDVIDRVDTIR 655
BLAST of Cicer_arietinum_v1_Contig1068 vs. TrEMBL
Match: B9MW59_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1110725 PE=4 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 9.651e-8 Identity = 39/97 (40.21%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 16 PGQVPQSLTTDEQIMLKDVSNRIRVRGISKSLDFDNVKMGLTDNKRMIKXXXXXXXXRNKELSFN-RICSKLPVIDFGIDKNRALDVIDRVAVAR*F 303 P +LT ++Q ML+DVS R + GISKS +FD K L+ + R+ K ++ F R S +PV++F ID +ALDVIDRV R F Sbjct: 553 PSSPSPTLTIEDQEMLRDVSKRKKTPGISKSQEFDTAKTRLSKHHRLSKSSSHSPMGETRKDPFPIRRPSSVPVMNFDIDWIKALDVIDRVDTIRSF 649
BLAST of Cicer_arietinum_v1_Contig1068 vs. TrEMBL
Match: D7KK56_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473586 PE=4 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.260e-7 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 37 LTTDEQIMLKDVSNRIRVRGISKSLDFDNV-KMGLTDNKRMIK----XXXXXXXXRNKELSFN-RICSKLPVIDFGIDKNRALDVIDRVAVAR 297 LTT++Q ML+DVS R + GISKS +F+ V K L + R+ K +NK+ +F+ R S +P+IDF ID+ +ALDVIDRV R Sbjct: 568 LTTEDQEMLRDVSKRRKTPGISKSQEFETVAKTRLCKHHRLSKSSSHSPMMGEMMKNKKDTFSTRRPSSVPIIDFDIDRVKALDVIDRVDTIR 660
BLAST of Cicer_arietinum_v1_Contig1068 vs. TrEMBL
Match: C5YYC8_SORBI (Putative uncharacterized protein Sb09g021280 OS=Sorghum bicolor GN=Sb09g021280 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 6.256e-7 Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 1 Query: 16 PGQV---PQSLTTDEQIMLKDVSNRIRVRGISKSLDFDNVKMGLTDNKRMIKXXXXXXXXRN-KELSFNRICSKLPVIDFGIDKNRALDVIDRVAVAR 297 PG++ P LT ++Q ML+DV R V GISKS +FD K + R+ K N KEL R S LPVIDF ID+ +ALD+IDR+ + + Sbjct: 550 PGKMNNSPPVLTQEDQDMLRDVKYRKFVPGISKSQEFDT-KSSHSKQSRLSKSNSHSPASGNRKELLPVRRPSMLPVIDFEIDRTKALDLIDRLDILK 646
BLAST of Cicer_arietinum_v1_Contig1068 vs. TAIR peptide
Match: AT1G34320.1 (| Symbols: | Protein of unknown function (DUF668) | chr1:12520713-12524046 FORWARD LENGTH=657) HSP 1 Score: 61.2326 bits (147), Expect = 6.481e-10 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 37 LTTDEQIMLKDVSNRIRVRGISKSLDFDNV-KMGLTDNKRMIK----XXXXXXXXRNKELSFN-RICSKLPVIDFGIDKNRALDVIDRVAVAR 297 LTT++Q ML+DVS R + GISKS +F+ V K L + R+ K +NK+ +F+ R S +P+IDF ID+ +ALDVIDRV R Sbjct: 563 LTTEDQEMLRDVSKRRKTPGISKSQEFETVAKARLCKHHRLSKSSSHSPMMGEMMKNKKDTFSTRRPSSVPIIDFDIDRMKALDVIDRVDTIR 655
BLAST of Cicer_arietinum_v1_Contig1068 vs. TAIR peptide
Match: AT5G08660.1 (| Symbols: | Protein of unknown function (DUF668) | chr5:2814526-2817845 FORWARD LENGTH=649) HSP 1 Score: 53.5286 bits (127), Expect = 1.351e-7 Identity = 34/88 (38.64%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 37 LTTDEQIMLKDVSNRIRVRGISKSLDFDNVKMGLTDNKRMIKXXXXXXXXR-NKELSFNRICSKLPVIDFGIDKNRALDVIDRVAVAR 297 +T +EQ ML++ S R R +SKS DFD+ + K R +K + R S P++DF IDK + LDVIDRV V R Sbjct: 549 VTDEEQKMLQEASKRKRTPCVSKSQDFDSEYSRARKCDPLSKSSEYFRGVRRSKSAAVKRYSSGFPLLDFAIDKEKVLDVIDRVDVPR 636 The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1068 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 8
BLAST of Cicer_arietinum_v1_Contig1068 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig1068 ID=Cicer_arietinum_v1_Contig1068; Name=Cicer_arietinum_v1_Contig1068; organism=Cicer arietinum; type=contig; length=721bpback to top |