Cicer_arietinum_v1_Contig108

Contig Overview
NameCicer_arietinum_v1_Contig108
Unique NameCicer_arietinum_v1_Contig108
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length540
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
HO062656ESTHO062656:1..540 -
GR408799ESTGR408799:113..540 +
HO066611ESTHO066611:144..508 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO062656HO062656Cicer arietinumEST
GR408799GR408799Cicer arietinumEST
HO066611HO066611Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. SwissProt
Match: Y4744_ARATH (Uncharacterized protein At4g06744 OS=Arabidopsis thaliana GN=At4g06744 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 6.695e-10
Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 2 
Query:   86 DNYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEF--QCKKKACSNHESLSYVPCK-THWGNKQSNA 298
            DNYFT +GP C  L++  +LDV  NCIP  P QRS +EC EF  + KK  C +    S+  C+ +H  +  S+A
Sbjct:  322 DNYFTHVGPWCRGLLEKGVLDVGNNCIPFFPGQRSMQECAEFFVKPKKYYCPHMWFHSFFSCRYSHISSSSSSA 395

HSP 2 Score: 23.483 bits (49), Expect = 6.695e-10
Identity = 14/23 (60.87%), Postives = 18/23 (78.26%), Query Frame = 1 
Query:   19 GTVPESVCVLPGIRNN-GNLSLS 84
            G VPE+VC+L  +R+N  NLSLS
Sbjct:  301 GAVPEAVCML--LRDNLVNLSLS 321
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Match: B9HS36_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_722243 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.113e-19
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 2 
Query:   89 NYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPCKT--HWGNKQSNAPVSQEMAAEPVTYKSLKPHRLRL 367
            NYFT +GP C  LIK RILDV  NCI  +P QRS  +C +F   K+ C N  SLSY+PC+   +  + +++   S   AA P+TY +LKPH+LRL
Sbjct:  258 NYFTQVGPECRKLIKKRILDVRMNCILDLPGQRSAADCAKFFSIKRTCPNERSLSYIPCRKGGYSSSLETSDQQSMAPAAAPITYNALKPHKLRL 352

HSP 2 Score: 23.483 bits (49), Expect = 3.113e-19
Identity = 13/22 (59.09%), Postives = 14/22 (63.64%), Query Frame = 1 
Query:   19 GTVPESVCVLPGIRNNGNLSLS 84
            G VPE VC LP +    NLSLS
Sbjct:  238 GPVPEMVCDLPRL---ANLSLS 256
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Match: Q9FXA1_ARATH (AT1G49750 protein OS=Arabidopsis thaliana GN=AT1G49750 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.711e-16
Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 2 
Query:   86 DNYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPC-KTHWGNKQSNAPVSQEMA--AEPVTYKSLKPHRLR 364
            +NYFT +GP C  LIK +I+DVS NCI  +PNQ++P EC +F  +K+ C N +SL  VPC K     K     + +E A  + PVTY +L P RLR
Sbjct:  397 NNYFTQVGPKCRKLIKRKIMDVSMNCILDLPNQKTPSECAKFFMRKQTCPNSKSLFTVPCDKNPNRGKPDQERLEEEKAQVSHPVTYNTLNPDRLR 492
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Match: B9DGR7_ARATH (AT1G49750 protein (Fragment) OS=Arabidopsis thaliana GN=AT1G49750 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.711e-16
Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 2 
Query:   86 DNYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPC-KTHWGNKQSNAPVSQEMA--AEPVTYKSLKPHRLR 364
            +NYFT +GP C  LIK +I+DVS NCI  +PNQ++P EC +F  +K+ C N +SL  VPC K     K     + +E A  + PVTY +L P RLR
Sbjct:  178 NNYFTQVGPKCRKLIKRKIMDVSMNCILDLPNQKTPSECAKFFMRKQTCPNSKSLFTVPCDKNPNRGKPDQERLEEEKAQVSHPVTYNTLNPDRLR 273
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Match: Q9LT85_ARATH (Similarity to receptor protein kinase OS=Arabidopsis thaliana GN=At3g19320 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.988e-15
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 2 
Query:   89 NYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPCKTHWGNKQSNAPVSQEMAAEPVTYKSLKPHRLR 364
            NYFT +GP C +LIK +ILDV  NCI  + NQR+P EC +F  +K++C N +S  Y+PC       + +   S   A+ PV+Y +L P R+R
Sbjct:  400 NYFTQVGPKCRTLIKRKILDVGMNCILDLTNQRTPWECAKFFLRKQSCPNFKSFFYLPCGKDPHRIKPDQEGSDGQASPPVSYNALNPDRIR 491
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Match: D7L9X9_ARALY (Leucine-rich repeat family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479447 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.802e-15
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 2 
Query:   89 NYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPCKTHWGNKQSNAPVSQEMAAEPVTYKSLKPHRLR 364
            NYFT +GP C +LIK +ILDV  NCI  + NQR+P EC +F  +K++C N++S  YVPC       + +       A+ PV+Y +L P R+R
Sbjct:  401 NYFTQVGPKCRTLIKRKILDVGMNCILDLANQRAPWECAKFFLRKQSCPNYKSFFYVPCGKDPHRIKPDQEGLDGQASPPVSYGALNPDRIR 492
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Match: B9RYC5_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0812190 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.160e-14
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 2 
Query:   89 NYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPCK-------THWGNKQSNAPVSQEMAAEPVTYKSLKP 352
            NYFT +GP C  LI  R LDV  NCI G+PNQR P+ C EF  K K C+N  S++Y+PCK       T    +QS   V+   AA P +Y +L P
Sbjct:  411 NYFTQVGPECRKLISLRRLDVRNNCILGLPNQRPPKACTEFFSKPKQCANERSMNYIPCKKKGYPSSTQNLYQQSTVAVA-PAAAPPRSYDALSP 504
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Match: D7KF16_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474107 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.515e-14
Identity = 42/99 (42.42%), Postives = 57/99 (57.58%), Query Frame = 2 
Query:   89 NYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPCKTHWGNKQSNAPVSQE-------MAAEPVTYKSLKPHRLR 364
            NYFT +GP C +LIK +I+DVS NCI  +PNQ++P EC  F  +K+ C N +SL  VPC    G   +     QE         + PV+Y +L P R+R
Sbjct:  382 NYFTQVGPKCRNLIKRKIMDVSMNCILDLPNQKTPSECANFFMRKQTCLNSKSLFTVPC----GKNPNRVKPDQERLEDEKARVSHPVSYNTLNPDRIR 476
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Match: B9RYC6_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0812200 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.604e-13
Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 2 
Query:   86 DNYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPCKTHWGNKQSNAPVSQEMAAEP--VTYKSLKPHR 358
            +NYFT IGP CW L+K  +LD+  NCI G+P+QRS  EC+ F    K C       ++PCK H        P+   +  +   ++YK+L  HR
Sbjct:  328 NNYFTKIGPLCWKLVKTGVLDIRNNCIHGLPDQRSWHECFFFFLHPKYCPYPSFFHFIPCKIH---TPPPPPIQPRVGPKRNLISYKALSKHR 417

HSP 2 Score: 22.3274 bits (46), Expect = 2.604e-13
Identity = 14/26 (53.85%), Postives = 14/26 (53.85%), Query Frame = 1 
Query:   19 GTVPESVCVLPGIRNNGNLSLSG*LF 96
            G VPE VC L    N  NLSLS   F
Sbjct:  309 GQVPEVVCAL---GNLANLSLSNNYF 331
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Match: A5B6Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001144 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.876e-11
Identity = 38/93 (40.86%), Postives = 48/93 (51.61%), Query Frame = 2 
Query:   89 NYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPCKTHWGNKQSNAPVSQEM---AAEPVTYKSLKPHR 358
            NYF SIGP C  L+    LDV +NCI G+PNQRS  EC  F    + C    S + + C     +  S    S +    A  PVTYK+L+P R
Sbjct:  345 NYFNSIGPYCKRLVNIGRLDVRRNCITGLPNQRSAAECTAFYSVSRTCPRPGSFNVITCSNPAASLSSAQVASLQAMAPAPSPVTYKALEPPR 437

HSP 2 Score: 20.7866 bits (42), Expect = 2.876e-11
Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 1 
Query:   19 GTVPESVCVLPGIRN 63
            G +P+S+C LP   N
Sbjct:  325 GRIPDSLCRLPNAYN 339
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Match: B6TA85_MAIZE (Protein binding protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.959e-11
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 2 
Query:   86 DNYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPCKTHWGNKQSNAPVSQEMAAE--PVTYKSLKP 352
            DNYFTS+G  CW LIK   L+V +NCI   PNQRS  +C +F  + K+C  +   +YVPC++ +   QS++  + + AAE    TY +L P
Sbjct:  358 DNYFTSLGSCCWDLIKEGRLNVDRNCIQWAPNQRSHEDCAKFLRQPKSCPVN---NYVPCRSKY---QSSSEPADDAAAEYRYRTYSALHP 442
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TAIR peptide
Match: AT1G49750.1 (| Symbols: | Leucine-rich repeat (LRR) family protein | chr1:18411177-18412779 REVERSE LENGTH=494)

HSP 1 Score: 87.8113 bits (216), Expect = 3.880e-18
Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 2 
Query:   86 DNYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPC-KTHWGNKQSNAPVSQEMA--AEPVTYKSLKPHRLR 364
            +NYFT +GP C  LIK +I+DVS NCI  +PNQ++P EC +F  +K+ C N +SL  VPC K     K     + +E A  + PVTY +L P RLR
Sbjct:  397 NNYFTQVGPKCRKLIKRKIMDVSMNCILDLPNQKTPSECAKFFMRKQTCPNSKSLFTVPCDKNPNRGKPDQERLEEEKAQVSHPVTYNTLNPDRLR 492
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TAIR peptide
Match: AT3G19320.1 (| Symbols: | Leucine-rich repeat (LRR) family protein | chr3:6696395-6698073 REVERSE LENGTH=493)

HSP 1 Score: 84.7297 bits (208), Expect = 3.285e-17
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 2 
Query:   89 NYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPCKTHWGNKQSNAPVSQEMAAEPVTYKSLKPHRLR 364
            NYFT +GP C +LIK +ILDV  NCI  + NQR+P EC +F  +K++C N +S  Y+PC       + +   S   A+ PV+Y +L P R+R
Sbjct:  400 NYFTQVGPKCRTLIKRKILDVGMNCILDLTNQRTPWECAKFFLRKQSCPNFKSFFYLPCGKDPHRIKPDQEGSDGQASPPVSYNALNPDRIR 491
[Close]
BLAST of Cicer_arietinum_v1_Contig108 vs. TAIR peptide
Match: AT4G06744.1 (| Symbols: | Leucine-rich repeat (LRR) family protein | chr4:4070870-4072084 REVERSE LENGTH=404)

HSP 1 Score: 60.077 bits (144), Expect = 7.246e-11
Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 2 
Query:   86 DNYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEF--QCKKKACSNHESLSYVPCK-THWGNKQSNA 298
            DNYFT +GP C  L++  +LDV  NCIP  P QRS +EC EF  + KK  C +    S+  C+ +H  +  S+A
Sbjct:  322 DNYFTHVGPWCRGLLEKGVLDVGNNCIPFFPGQRSMQECAEFFVKPKKYYCPHMWFHSFFSCRYSHISSSSSSA 395

HSP 2 Score: 23.483 bits (49), Expect = 7.246e-11
Identity = 14/23 (60.87%), Postives = 18/23 (78.26%), Query Frame = 1 
Query:   19 GTVPESVCVLPGIRNN-GNLSLS 84
            G VPE+VC+L  +R+N  NLSLS
Sbjct:  301 GAVPEAVCML--LRDNLVNLSLS 321
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig108 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
Y4744_ARATH6.695e-1043.24Uncharacterized protein At4g06744 OS=Arabidopsis t... [more]
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BLAST of Cicer_arietinum_v1_Contig108 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9HS36_POPTR3.113e-1948.42Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9FXA1_ARATH4.711e-1646.88AT1G49750 protein OS=Arabidopsis thaliana GN=AT1G4... [more]
B9DGR7_ARATH4.711e-1646.88AT1G49750 protein (Fragment) OS=Arabidopsis thalia... [more]
Q9LT85_ARATH3.988e-1543.48Similarity to receptor protein kinase OS=Arabidops... [more]
D7L9X9_ARALY6.802e-1543.48Leucine-rich repeat family protein OS=Arabidopsis ... [more]
B9RYC5_RICCO1.160e-1446.32Serine-threonine protein kinase, plant-type, putat... [more]
D7KF16_ARALY1.515e-1442.42Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9RYC6_RICCO2.604e-1338.71Serine-threonine protein kinase, plant-type, putat... [more]
A5B6Y0_VITVI2.876e-1140.86Putative uncharacterized protein OS=Vitis vinifera... [more]
B6TA85_MAIZE5.959e-1142.86Protein binding protein OS=Zea mays PE=2 SV=1[more]
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BLAST of Cicer_arietinum_v1_Contig108 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G49750.13.880e-1846.88| Symbols: | Leucine-rich repeat (LRR) family pro... [more]
AT3G19320.13.285e-1743.48| Symbols: | Leucine-rich repeat (LRR) family pro... [more]
AT4G06744.17.246e-1143.24| Symbols: | Leucine-rich repeat (LRR) family pro... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 25..34
score
NoneNo IPR availableSEGsegsegcoord: 7..17
score
NoneNo IPR availableSEGsegsegcoord: 51..70
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig108 ID=Cicer_arietinum_v1_Contig108; Name=Cicer_arietinum_v1_Contig108; organism=Cicer arietinum; type=contig; length=540bp
CGAGCGGCCGCCCGGGCAGGTACTGTTCCTGAGAGTGTTTGTGTTCTTCC
TGGGATACGTAACAATGGGAATTTGTCTTTGTCGGGATAACTATTTCACT
TCAATTGGACCAGCATGTTGGAGTTTGATTAAGTATAGGATATTGGATGT
TAGTAAAAATTGTATCCCTGGCATTCCAAATCAAAGATCTCCGAGAGAGT
GTTATGAGTTTCAGTGTAAGAAGAAGGCTTGTTCGAATCATGAGAGTTTG
AGTTATGTTCCTTGTAAGACACATTGGGGGAACAAACAGAGTAATGCCCC
TGTTTCTCAAGAAATGGCTGCAGAGCCTGTGACTTATAAGTCTCTTAAAC
CGCATCGGTTGAGATTGAGATGATGATGATGCTTTCTCTTAAACCGCATC
TACTATGTGTCTTCACTTTCATTATTATGCTTATGTTATGTATTTGCATA
TATTTATTTTTCCATCATGAAATGATGTTAATTGTACAATTTGTATGTGT
CCATGAATAAATTAATAATAATAATAAGGACTTGTTATCC
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