Cicer_arietinum_v1_Contig1083

Contig Overview


Name	Cicer_arietinum_v1_Contig1083
Unique Name	Cicer_arietinum_v1_Contig1083
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	471

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR917847	EST	GR917847:1..430 +	Cicer arietinum unigene v1	n/a
HO066841	EST	HO066841:78..471 +	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR917847	GR917847	Cicer arietinum	EST
HO066841	HO066841	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Match: TBB_CICAR (Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 3.397e-78
Identity = 140/143 (97.90%), Postives = 143/143 (100.00%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +YVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  282 QYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 424

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Match: TBB6_GOSHI (Tubulin beta-6 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 9.251e-76
Identity = 135/143 (94.41%), Postives = 141/143 (98.60%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +YVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDIPP+ LK SSTFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  282 QYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKTSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 424

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Match: TBB1_ARATH (Tubulin beta-1 chain OS=Arabidopsis thaliana GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 2.061e-75
Identity = 132/143 (92.31%), Postives = 141/143 (98.60%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQI+NVQNKNSSYFVEWIPNNVKSSVCDIPP  +KM+STF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV++Y
Sbjct:  281 QYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 423

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Match: TBB3_ELEIN (Tubulin beta-3 chain OS=Eleusine indica GN=TUBB3 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 4.591e-75
Identity = 134/143 (93.71%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDIPP+ L MSSTFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  280 QYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLTMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Match: TBB2_SOLTU (Tubulin beta-2 chain OS=Solanum tuberosum GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 4.591e-75
Identity = 133/143 (93.01%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPP  LKM+STF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND VA+Y
Sbjct:  283 QYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDPVAEY 425

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Match: TBB1_SOLTU (Tubulin beta-1 chain OS=Solanum tuberosum GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 4.591e-75
Identity = 133/143 (93.01%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPP  LKM+STF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND VA+Y
Sbjct:  283 QYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDPVAEY 425

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Match: TBB5_ARATH (Tubulin beta-5 chain OS=Arabidopsis thaliana GN=TUBB5 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 5.996e-75
Identity = 130/143 (90.91%), Postives = 142/143 (99.30%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWD+KNMMCAADPRHGRYLTASA+FRG+MSTKEVDEQI+N+QNKNSSYFVEWIPNNVKSSVCDIPPK LKM++TF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  281 QYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 423

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Match: TBB5_ORYSJ (Tubulin beta-5 chain OS=Oryza sativa subsp. japonica GN=TUBB5 PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 7.831e-75
Identity = 133/143 (93.01%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y +LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDIPP  LKM+STFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  280 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Match: TBB7_ORYSJ (Tubulin beta-7 chain OS=Oryza sativa subsp. japonica GN=TUBB7 PE=2 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 1.336e-74
Identity = 131/143 (91.61%), Postives = 141/143 (98.60%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y +LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDIPP+ LKM++TF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  280 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Match: TBB2_MAIZE (Tubulin beta-2 chain OS=Zea mays GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.336e-74
Identity = 132/143 (92.31%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y SLTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPP+ L MSSTF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV++Y
Sbjct:  280 QYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Match: B1PBW3_GOSHI (Beta-tubulin 13 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 9.524e-76
Identity = 135/143 (94.41%), Postives = 143/143 (100.00%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPPKNL+M+STF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  283 QYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLRMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 425

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Match: B1PBW0_GOSHI (Beta-tubulin 8 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.244e-75
Identity = 136/142 (95.77%), Postives = 141/142 (99.30%), Query Frame = -2

Query:   24 YVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 449
            Y+SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPPK LKMSSTF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  285 YISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 426

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Match: B9H4Y2_POPTR (Tubulin, beta chain OS=Populus trichocarpa GN=TUB20 PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 2.122e-75
Identity = 138/149 (92.62%), Postives = 144/149 (96.64%), Query Frame = -2

Query:   24 SSGRPGRYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 470
            S G  G Y+SLTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPPK LKMSSTF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  278 SRGSQG-YISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 425

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Match: C6TH12_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 3.619e-75
Identity = 136/143 (95.10%), Postives = 141/143 (98.60%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +YVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEW PNNVKSSVCDIPPKNLKMS TFIGNSTSIQE+FRRVSEQFTAM+RRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  282 QYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWTPNNVKSSVCDIPPKNLKMSCTFIGNSTSIQEMFRRVSEQFTAMYRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 424

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Match: B9R897_RICCO (Tubulin beta chain, putative OS=Ricinus communis GN=RCOM_1598040 PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 4.727e-75
Identity = 134/143 (93.71%), Postives = 142/143 (99.30%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPPK L+M+STF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  282 QYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLRMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 424

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Match: A7KQH2_EUCGR (Beta-tubulin (Fragment) OS=Eucalyptus grandis GN=TUB3 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 4.727e-75
Identity = 134/143 (93.71%), Postives = 142/143 (99.30%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPPK LKM+STF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  279 QYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 421

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Match: B1PBW2_GOSHI (Beta-tubulin 11 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 6.173e-75
Identity = 135/143 (94.41%), Postives = 142/143 (99.30%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +YVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDIPP+ LKMSSTFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEM+FTEAESNMNDLVA+Y
Sbjct:  282 QYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMDFTEAESNMNDLVAEY 424

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Match: Q676U1_9SOLA (Beta-tubulin OS=Nicotiana attenuata GN=TUB PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.053e-74
Identity = 134/143 (93.71%), Postives = 141/143 (98.60%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPP  LKM+STF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  283 QYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 425

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Match: Q38MV0_SOLLC (Beta-tubulin OS=Solanum lycopersicum GN=TUB PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.053e-74
Identity = 134/143 (93.71%), Postives = 141/143 (98.60%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPP  LKM+STF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  283 QYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 425

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Match: Q38HW0_SOLTU (Beta-tubulin-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.053e-74
Identity = 134/143 (93.71%), Postives = 141/143 (98.60%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPP  LKM+STF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  283 QYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 425

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Match: AT1G75780.1 (| Symbols: TUB1 | tubulin beta-1 chain | chr1:28451378-28453602 REVERSE LENGTH=447)

HSP 1 Score: 280.796 bits (717), Expect = 2.366e-76
Identity = 132/143 (92.31%), Postives = 141/143 (98.60%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQI+NVQNKNSSYFVEWIPNNVKSSVCDIPP  +KM+STF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV++Y
Sbjct:  281 QYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 423

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Match: AT1G20010.1 (| Symbols: TUB5 | tubulin beta-5 chain | chr1:6938033-6940481 REVERSE LENGTH=449)

HSP 1 Score: 279.256 bits (713), Expect = 6.885e-76
Identity = 130/143 (90.91%), Postives = 142/143 (99.30%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y+SLTVPELTQQMWD+KNMMCAADPRHGRYLTASA+FRG+MSTKEVDEQI+N+QNKNSSYFVEWIPNNVKSSVCDIPPK LKM++TF+GNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  281 QYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 423

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Match: AT5G23860.2 (| Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449)

HSP 1 Score: 276.944 bits (707), Expect = 3.417e-75
Identity = 132/143 (92.31%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y +LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKS+VCDIPP  LKM+STFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV++Y
Sbjct:  280 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Match: AT5G23860.1 (| Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449)

HSP 1 Score: 276.944 bits (707), Expect = 3.417e-75
Identity = 132/143 (92.31%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y +LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKS+VCDIPP  LKM+STFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV++Y
Sbjct:  280 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Match: AT5G62700.1 (| Symbols: TUB3 | tubulin beta chain 3 | chr5:25184501-25186426 FORWARD LENGTH=450)

HSP 1 Score: 276.174 bits (705), Expect = 5.829e-75
Identity = 131/143 (91.61%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y SLTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKS+VCDIPP  LKM+STFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV++Y
Sbjct:  280 QYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Match: AT5G62690.1 (| Symbols: TUB2 | tubulin beta chain 2 | chr5:25181560-25183501 FORWARD LENGTH=450)

HSP 1 Score: 276.174 bits (705), Expect = 5.829e-75
Identity = 131/143 (91.61%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y SLTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKS+VCDIPP  LKM+STFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV++Y
Sbjct:  280 QYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Match: AT2G29550.1 (| Symbols: TUB7 | tubulin beta-7 chain | chr2:12644258-12645932 REVERSE LENGTH=449)

HSP 1 Score: 276.174 bits (705), Expect = 5.829e-75
Identity = 131/143 (91.61%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y +LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKS+VCDIPP  LKM+STFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV++Y
Sbjct:  280 QYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Match: AT5G12250.1 (| Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962971 REVERSE LENGTH=449)

HSP 1 Score: 273.092 bits (697), Expect = 4.934e-74
Identity = 130/143 (90.91%), Postives = 139/143 (97.20%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y +LTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDI P+ L M+STFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV++Y
Sbjct:  280 QYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Match: AT5G44340.1 (| Symbols: TUB4 | tubulin beta chain 4 | chr5:17859442-17860994 REVERSE LENGTH=444)

HSP 1 Score: 273.092 bits (697), Expect = 4.934e-74
Identity = 129/143 (90.21%), Postives = 140/143 (97.90%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y +L+VPELTQQMWDAKNMMCAADPRHGRYLTASA+FRGK+STKEVDEQ++N+QNKNSSYFVEWIPNNVKSSVCDI PK LKM+STFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  280 QYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 422

[Close]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Match: AT4G20890.1 (| Symbols: TUB9 | tubulin beta-9 chain | chr4:11182218-11183840 FORWARD LENGTH=444)

HSP 1 Score: 272.322 bits (695), Expect = 8.417e-74
Identity = 130/143 (90.91%), Postives = 139/143 (97.20%), Query Frame = -2

Query:   24 RYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEVFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAKY 452
            +Y +L+VPELTQQMWDAKNMMCAADPRHGRYLTASA+FRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCDI P  LKM+STFIGNSTSIQE+FRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA+Y
Sbjct:  280 QYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEY 422

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig1083 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
TBB_CICAR	3.397e-78	97.90	Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2...	[more]
TBB6_GOSHI	9.251e-76	94.41	Tubulin beta-6 chain OS=Gossypium hirsutum PE=2 SV...	[more]
TBB1_ARATH	2.061e-75	92.31	Tubulin beta-1 chain OS=Arabidopsis thaliana GN=TU...	[more]
TBB3_ELEIN	4.591e-75	93.71	Tubulin beta-3 chain OS=Eleusine indica GN=TUBB3 P...	[more]
TBB2_SOLTU	4.591e-75	93.01	Tubulin beta-2 chain OS=Solanum tuberosum GN=TUBB2...	[more]
TBB1_SOLTU	4.591e-75	93.01	Tubulin beta-1 chain OS=Solanum tuberosum GN=TUBB1...	[more]
TBB5_ARATH	5.996e-75	90.91	Tubulin beta-5 chain OS=Arabidopsis thaliana GN=TU...	[more]
TBB5_ORYSJ	7.831e-75	93.01	Tubulin beta-5 chain OS=Oryza sativa subsp. japoni...	[more]
TBB7_ORYSJ	1.336e-74	91.61	Tubulin beta-7 chain OS=Oryza sativa subsp. japoni...	[more]
TBB2_MAIZE	1.336e-74	92.31	Tubulin beta-2 chain OS=Zea mays GN=TUBB2 PE=2 SV=...	[more]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B1PBW3_GOSHI	9.524e-76	94.41	Beta-tubulin 13 OS=Gossypium hirsutum PE=2 SV=1	[more]
B1PBW0_GOSHI	1.244e-75	95.77	Beta-tubulin 8 OS=Gossypium hirsutum PE=2 SV=1	[more]
B9H4Y2_POPTR	2.122e-75	92.62	Tubulin, beta chain OS=Populus trichocarpa GN=TUB2...	[more]
C6TH12_SOYBN	3.619e-75	95.10	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9R897_RICCO	4.727e-75	93.71	Tubulin beta chain, putative OS=Ricinus communis G...	[more]
A7KQH2_EUCGR	4.727e-75	93.71	Beta-tubulin (Fragment) OS=Eucalyptus grandis GN=T...	[more]
B1PBW2_GOSHI	6.173e-75	94.41	Beta-tubulin 11 OS=Gossypium hirsutum PE=2 SV=1	[more]
Q676U1_9SOLA	1.053e-74	93.71	Beta-tubulin OS=Nicotiana attenuata GN=TUB PE=2 SV...	[more]
Q38MV0_SOLLC	1.053e-74	93.71	Beta-tubulin OS=Solanum lycopersicum GN=TUB PE=2 S...	[more]
Q38HW0_SOLTU	1.053e-74	93.71	Beta-tubulin-like protein OS=Solanum tuberosum PE=...	[more]

BLAST of Cicer_arietinum_v1_Contig1083 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G75780.1	2.366e-76	92.31	\| Symbols: TUB1 \| tubulin beta-1 chain \| chr1:2845...	[more]
AT1G20010.1	6.885e-76	90.91	\| Symbols: TUB5 \| tubulin beta-5 chain \| chr1:6938...	[more]
AT5G23860.2	3.417e-75	92.31	\| Symbols: TUB8 \| tubulin beta 8 \| chr5:8042962-80...	[more]
AT5G23860.1	3.417e-75	92.31	\| Symbols: TUB8 \| tubulin beta 8 \| chr5:8042962-80...	[more]
AT5G62700.1	5.829e-75	91.61	\| Symbols: TUB3 \| tubulin beta chain 3 \| chr5:2518...	[more]
AT5G62690.1	5.829e-75	91.61	\| Symbols: TUB2 \| tubulin beta chain 2 \| chr5:2518...	[more]
AT2G29550.1	5.829e-75	91.61	\| Symbols: TUB7 \| tubulin beta-7 chain \| chr2:1264...	[more]
AT5G12250.1	4.934e-74	90.91	\| Symbols: TUB6 \| beta-6 tubulin \| chr5:3961317-39...	[more]
AT5G44340.1	4.934e-74	90.21	\| Symbols: TUB4 \| tubulin beta chain 4 \| chr5:1785...	[more]
AT4G20890.1	8.417e-74	90.91	\| Symbols: TUB9 \| tubulin beta-9 chain \| chr4:1118...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 19..32 score
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 7..149 score: 1.7e
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 38..56 score: 1e-42coord: 56..70 score: 1e-42coord: 74..97 score: 1e-42coord: 104..115 score: 1e-42coord: 139..157 score: 1
IPR002453	Beta tubulin	PANTHER	PTHR11588:SF9	TUBULIN BETA CHAIN	coord: 7..149 score: 1.7e
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 8..154 score: 6.6
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	GENE3D	3.30.1330.20	no description	coord: 8..100 score: 4.7
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 8..109 score: 5.6
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	SMART	SM00865	no description	coord: 2..110 score: 1.9
IPR023123	Tubulin, C-terminal	GENE3D	1.10.287.600	no description	coord: 101..149 score: 2.5

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig1083 ID=Cicer_arietinum_v1_Contig1083; Name=Cicer_arietinum_v1_Contig1083; organism=Cicer arietinum; type=contig; length=471bp
CCATTAGCGTGGTCGCGGCCGAGGTACTTTGCTACCAAATCGTTCATGTT
ACTCTCTGCCTCTGTGAACTCCATCTCATCCATTCCTTCTCCAGTGTACC
AATGCAAGAAGGCTTTGCGCCGGAACATGGCAGTGAATTGCTCACTCACC
CTCCTAAACACCTCCTGAATTGAAGTTGAGTTCCCAATAAAAGTGGAAGA
CATCTTCAAGTTCTTGGGTGGAATGTCACACACACTAGACTTCACATTGT
TGGGAATCCATTCAACAAAATATGAAGAATTCTTGTTCTGCACATTGATT
ATTTGTTCATCCACCTCTTTGGTGCTCATCTTTCCTCTGAACATTGCAGA
TGCAGTCAAGTATCGGCCATGTCGGGGATCAGCAGCACACATCATATTTT
TGGCGTCCCACATTTGCTGAGTCAGTTCTGGGACGGTAAGGGAGACGTAC
CTGCCCGGGCGGCCGCTCGAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding
GO:0005198	structural molecule activity
GO:0003924	GTPase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005874	microtubule
GO:0043234	protein complex

Vocabulary: **Biological Process**
Term	Definition
GO:0007017	microtubule-based process
GO:0007018	microtubule-based movement
GO:0051258	protein polymerization

Vocabulary: **INTERPRO**
Term	Definition
IPR000217	Tubulin
IPR002453	Beta_tubulin
IPR008280	Tub_FtsZ_C
IPR018316	Tubulin/FtsZ_2-layer-sand-dom
IPR023123	Tubulin_C

Search form

Cicer_arietinum_v1_Contig1083