Cicer_arietinum_v1_Contig1141

Contig Overview
NameCicer_arietinum_v1_Contig1141
Unique NameCicer_arietinum_v1_Contig1141
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length762
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR917408ESTGR917408:1..462 +Cicer arietinum unigene v1n/a
GR404825ESTGR404825:283..762 -Cicer arietinum unigene v1n/a
GR406823ESTGR406823:295..754 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR917408GR917408Cicer arietinumEST
GR404825GR404825Cicer arietinumEST
GR406823GR406823Cicer arietinumEST


Homology
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BLAST of Cicer_arietinum_v1_Contig1141 vs. TAIR peptide
Match: AT2G22795.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37820.1); Has 799854 Blast hits to 188815 proteins in 4452 species: Archae - 4529; Bacteria - 144236; Metazoa - 287749; Fungi - 87083; Plants - 43826; Viruses - 3662; Other Eukaryotes - 228769 (source: NCBI BLink). | chr2:9697380-9699584 REVERSE LENGTH=734)

HSP 1 Score: 56.6102 bits (135), Expect = 1.736e-8
Identity = 50/159 (31.45%), Postives = 83/159 (52.20%), Query Frame = 1 
Query:   22 GTIDSNKQEKID----AVENE--GAEKVSLDVEDINGKTEINE--GAEKASLDVEDINSKTEINE--GAEKASLDVEDINSKTEINE--GAEKASLDVEDINGKTEINE---GAEKASLDVEDINGKTEISASDEKETIQG----EEQVKKMVDNESVI 441
            G  +S  +EK D      ENE  G E+  ++    NG TE NE  G E++ ++    N  TE NE  G E++ ++    N  TE NE  G+E++ ++ +  NG TE +    G E++ ++ +  NG +E S  +EK+  +G    EE  +K +D ++ I
Sbjct:  136 GVEESEVEEKRDNGGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTEESEVEEKKDNGSSEESEVEEKKENRGIDESEESKEKDIDEKANI 294
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1141 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G22795.11.736e-831.45| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 25..40
score: NAcoord: 48..62
score: NAcoord: 68..82
score: NAcoord: 85..100
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1141 ID=Cicer_arietinum_v1_Contig1141; Name=Cicer_arietinum_v1_Contig1141; organism=Cicer arietinum; type=contig; length=762bp
GATTAGCGTGGTCGCGGCCGAGGTACAATTGACAGTAATAAGCAGGAAAA
AATCGACGCTGTGGAAAACGAAGGAGCTGAGAAAGTGAGTCTCGATGTTG
AAGATATTAACGGTAAGACCGAAATTAACGAAGGAGCTGAGAAAGCGAGT
CTCGATGTTGAAGATATTAACAGTAAGACTGAAATTAATGAAGGAGCTGA
GAAAGCGAGTCTCGATGTTGAAGATATTAACAGTAAGACCGAAATTAACG
AAGGAGCTGAGAAAGCGAGTCTCGATGTTGAAGATATTAACGGTAAGACC
GAAATTAACGAAGGAGCTGAGAAAGCGAGTCTTGATGTTGAAGATATTAA
CGGTAAGACCGAAATTTCAGCAAGTGATGAAAAAGAAACCATTCAAGGTG
AGGAGCAAGTAAAGAAAATGGTTGACAATGAAAGTGTTATTTGGAGCAGT
GCACAATGAAGTAGTATTAATTAATACTATATTAGTATTAATCAACTCTT
AGTGCATGCTGCTGATATGTACTTTATTAATATTACTTAGTGCCCTTAAT
TTTTTTAATGTTATTAAAGATGTTTTAGTTATTTTGTGACATTGTGAATG
TCTTGTATTCTGTTTTAACATATGGATGTATCTAGGAGATTAAACTTGTA
TGCCTCATAGATTAGATCTTTTGGTTTTCCATAGTGCAGATCTTAGTGTA
GATTGGAGATGTTTGTTCCAAATTTATGTGAACAATATAAAACATTTGAA
TTTGAATTTTTT
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