Cicer_arietinum_v1_Contig12

Contig Overview


Name	Cicer_arietinum_v1_Contig12
Unique Name	Cicer_arietinum_v1_Contig12
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	384

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
HO066896	EST	HO066896:1..224 +	Cicer arietinum unigene v1	n/a
FE670721	EST	FE670721:2..356 +	Cicer arietinum unigene v1	n/a
GR915579	EST	GR915579:15..384 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
HO066896	HO066896	Cicer arietinum	EST
FE670721	FE670721	Cicer arietinum	EST
GR915579	GR915579	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Match: POR_PEA (Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.606e-27
Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSEEESGKRL +VV D SLTKSGVYWSWN A  SFENQLSQEASD EKARKVWEVSEKLVGLA
Sbjct:  330 KYITKGYVSEEESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSQEASDAEKARKVWEVSEKLVGLA 399

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Match: PORA_ARATH (Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.890e-26
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE E+GKRL +VV D SLTKSGVYWSWNK   SFENQLSQEASDVEKAR+VWEVSEKLVGLA
Sbjct:  336 KYITKGYVSESEAGKRLAQVVADPSLTKSGVYWSWNKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 405

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Match: PORB_ARATH (Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 3.775e-26
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE ESGKRL +VV D SLTKSGVYWSWN A  SFENQLS+EASDVEKARKVWE+SEKLVGLA
Sbjct:  332 KYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Match: POR_DAUCA (Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.098e-25
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE ESGKRL +VV + SLTKSGVYWSWNK   SFENQLS+EASDVEKARKVWEVSEKLVGLA
Sbjct:  329 KYITKGYVSEAESGKRLAQVVSEPSLTKSGVYWSWNKDSASFENQLSEEASDVEKARKVWEVSEKLVGLA 398

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Match: PORB_HORVU (Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.196e-25
Identity = 55/70 (78.57%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSEEE+GKRL +VV + SLTKSGVYWSWNK   SFENQLS+EASD EKARKVWE+SEKLVGLA
Sbjct:  326 KYITKGYVSEEEAGKRLAQVVSEPSLTKSGVYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Match: PORB_ORYSJ (Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.586e-24
Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSEEE+GKRL +VV D SLTKSGVYWSWN    SFENQLS+EASD EKA+KVWE+SEKLVGLA
Sbjct:  329 KYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNNNSASFENQLSEEASDPEKAKKVWELSEKLVGLA 398

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Match: PORA_CUCSA (Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.705e-24
Identity = 53/70 (75.71%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            ++IT+ +VSE+E+GKRL +VV + SLTKSGVYWSWNK   SFENQLSQEASD EKARKVWE+SEKLVGLA
Sbjct:  329 KFITQGYVSEDEAGKRLAQVVSEPSLTKSGVYWSWNKNSASFENQLSQEASDAEKARKVWELSEKLVGLA 398

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Match: PORA_WHEAT (Protochlorophyllide reductase A, chloroplastic OS=Triticum aestivum GN=PORA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.533e-24
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +++TK  VSE ESGKRL +VV + SLTKSGVYWSWNK   SFENQLSQEASD EKARKVWE+SEKLVGLA
Sbjct:  319 KFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Match: POR_AVESA (Protochlorophyllide reductase (Fragment) OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.871e-24
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +++TK  VSE ESGKRL +VV + SLTKSGVYWSWNK   SFENQLSQEASD EKARKVWE+SEKLVGLA
Sbjct:  244 KFVTKGFVSEAESGKRLAQVVGEPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 313

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Match: PORC_ARATH (Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.871e-24
Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSEEE+GKRL +VV D SL KSGVYWSWN    SFENQLS+EASD EKA+K+WEVSEKLVGLA
Sbjct:  332 KYITKGYVSEEEAGKRLAQVVSDPSLGKSGVYWSWNNNSSSFENQLSKEASDAEKAKKLWEVSEKLVGLA 401

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Match: B6VGD9_CHOBU (Protochlorophyllide oxidoreductase B OS=Chorispora bungeana PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.101e-26
Identity = 59/70 (84.29%), Postives = 63/70 (90.00%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE ESGKRL +VV D SLTKSGVYWSWNKA  SFENQLSQEASDVEKARKVWE+SEKLVGLA
Sbjct:  333 KYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSWNKASASFENQLSQEASDVEKARKVWEISEKLVGLA 402

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Match: Q2V2Y7_ARATH (AT5G54190 protein OS=Arabidopsis thaliana GN=AT5G54190 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.899e-25
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE E+GKRL +VV D SLTKSGVYWSWNK   SFENQLSQEASDVEKAR+VWEVSEKLVGLA
Sbjct:  215 KYITKGYVSESEAGKRLAQVVADPSLTKSGVYWSWNKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 284

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Match: Q8LAV9_ARATH (Protochlorophyllide reductase OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.705e-25
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE ESGKRL +VV D SLTKSGVYWSWN A  SFENQLS+EASDVEKARKVWE+SEKLVGLA
Sbjct:  332 KYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Match: D7MEF6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492051 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.705e-25
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE ESGKRL +VV D SLTKSGVYWSWN A  SFENQLS+EASDVEKARKVWE+SEKLVGLA
Sbjct:  332 KYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Match: B9DG36_ARATH (AT4G27440 protein OS=Arabidopsis thaliana GN=At4g27440 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.705e-25
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE ESGKRL +VV D SLTKSGVYWSWN A  SFENQLS+EASDVEKARKVWE+SEKLVGLA
Sbjct:  332 KYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Match: D7TE52_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030386001 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.006e-24
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSEEE+GKRL +VV D SLTKSGVYWSWNK   SF+NQLSQEASD EKARKVWE+SEKLVGLA
Sbjct:  330 KYITKGYVSEEEAGKRLAQVVTDPSLTKSGVYWSWNKNSASFQNQLSQEASDAEKARKVWEISEKLVGLA 399

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Match: Q9LKH8_PHAAU (NADPH-protochlorophyllide oxidoreductase OS=Phaseolus aureus GN=CipPor PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.716e-24
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            ++ITK  VSE+ESGKRL +VV D SLTKSGVYWSWNKA  SFENQLSQEASD +KARKVWE+SEKLVGLA
Sbjct:  329 KFITKGFVSEDESGKRLAQVVSDPSLTKSGVYWSWNKASASFENQLSQEASDADKARKVWEISEKLVGLA 398

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Match: D7MTR3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495501 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.716e-24
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE E+GKRL +VV D SLTKSGVYWSWNK   SFENQLSQEASDVEKAR+VWEVSEKLVGLA
Sbjct:  335 KYITKGYVSETEAGKRLAQVVGDPSLTKSGVYWSWNKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 404

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Match: Q9LL34_SOLLC (Light dependent NADH:protochlorophyllide oxidoreductase 3 (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.242e-24
Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE ESGKRL +VV D SLTKSGVYWSWNK   SFENQLS+EASD EKARKVWEVSEKLVGLA
Sbjct:    6 KYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSEEASDAEKARKVWEVSEKLVGLA 75

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Match: B9T7M6_RICCO (Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0252880 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.928e-24
Identity = 55/70 (78.57%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE+E+GKRL +VV D SLTKSGVYWSWNK   SFENQLSQEASD +KARKVWE+SEKLVGLA
Sbjct:  327 KYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 396

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TAIR peptide
Match: AT5G54190.2 (| Symbols: PORA | protochlorophyllide oxidoreductase A | chr5:21991183-21992238 REVERSE LENGTH=284)

HSP 1 Score: 117.087 bits (292), Expect = 2.792e-27
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE E+GKRL +VV D SLTKSGVYWSWNK   SFENQLSQEASDVEKAR+VWEVSEKLVGLA
Sbjct:  215 KYITKGYVSESEAGKRLAQVVADPSLTKSGVYWSWNKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 284

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TAIR peptide
Match: AT5G54190.1 (| Symbols: PORA | protochlorophyllide oxidoreductase A | chr5:21991183-21992773 REVERSE LENGTH=405)

HSP 1 Score: 117.087 bits (292), Expect = 2.792e-27
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE E+GKRL +VV D SLTKSGVYWSWNK   SFENQLSQEASDVEKAR+VWEVSEKLVGLA
Sbjct:  336 KYITKGYVSESEAGKRLAQVVADPSLTKSGVYWSWNKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 405

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TAIR peptide
Match: AT4G27440.2 (| Symbols: PORB | protochlorophyllide oxidoreductase B | chr4:13725648-13727107 FORWARD LENGTH=401)

HSP 1 Score: 116.701 bits (291), Expect = 3.647e-27
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE ESGKRL +VV D SLTKSGVYWSWN A  SFENQLS+EASDVEKARKVWE+SEKLVGLA
Sbjct:  332 KYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TAIR peptide
Match: AT4G27440.1 (| Symbols: PORB | protochlorophyllide oxidoreductase B | chr4:13725648-13727107 FORWARD LENGTH=401)

HSP 1 Score: 116.701 bits (291), Expect = 3.647e-27
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSE ESGKRL +VV D SLTKSGVYWSWN A  SFENQLS+EASDVEKARKVWE+SEKLVGLA
Sbjct:  332 KYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TAIR peptide
Match: AT1G03630.2 (| Symbols: POR C, PORC | protochlorophyllide oxidoreductase C | chr1:907699-909245 FORWARD LENGTH=399)

HSP 1 Score: 108.997 bits (271), Expect = 7.605e-25
Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSEEE+GKRL +VV D SL KSGVYWSWN    SFENQLS+EASD EKA+K+WEVSEKLVGLA
Sbjct:  330 KYITKGYVSEEEAGKRLAQVVSDPSLGKSGVYWSWNNNSSSFENQLSKEASDAEKAKKLWEVSEKLVGLA 399

[Close]

BLAST of Cicer_arietinum_v1_Contig12 vs. TAIR peptide
Match: AT1G03630.1 (| Symbols: POR C, PORC | protochlorophyllide oxidoreductase C | chr1:907699-909245 FORWARD LENGTH=401)

HSP 1 Score: 108.997 bits (271), Expect = 7.605e-25
Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = -3

Query:  155 RYITKFHVSEEESGKRLGEVVIDSSLTKSGVYWSWNKAFGSFENQLSQEASDVEKARKVWEVSEKLVGLA 364
            +YITK +VSEEE+GKRL +VV D SL KSGVYWSWN    SFENQLS+EASD EKA+K+WEVSEKLVGLA
Sbjct:  332 KYITKGYVSEEEAGKRLAQVVSDPSLGKSGVYWSWNNNSSSFENQLSKEASDAEKAKKLWEVSEKLVGLA 401

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig12 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig12 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
POR_PEA	7.606e-27	84.29	Protochlorophyllide reductase, chloroplastic OS=Pi...	[more]
PORA_ARATH	2.890e-26	81.43	Protochlorophyllide reductase A, chloroplastic OS=...	[more]
PORB_ARATH	3.775e-26	81.43	Protochlorophyllide reductase B, chloroplastic OS=...	[more]
POR_DAUCA	1.098e-25	81.43	Protochlorophyllide reductase, chloroplastic OS=Da...	[more]
PORB_HORVU	3.196e-25	78.57	Protochlorophyllide reductase B, chloroplastic OS=...	[more]
PORB_ORYSJ	1.586e-24	77.14	Protochlorophyllide reductase B, chloroplastic OS=...	[more]
PORA_CUCSA	2.705e-24	75.71	Protochlorophyllide reductase, chloroplastic OS=Cu...	[more]
PORA_WHEAT	3.533e-24	77.14	Protochlorophyllide reductase A, chloroplastic OS=...	[more]
POR_AVESA	7.871e-24	77.14	Protochlorophyllide reductase (Fragment) OS=Avena ...	[more]
PORC_ARATH	7.871e-24	75.71	Protochlorophyllide reductase C, chloroplastic OS=...	[more]

BLAST of Cicer_arietinum_v1_Contig12 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B6VGD9_CHOBU	9.101e-26	84.29	Protochlorophyllide oxidoreductase B OS=Chorispora...	[more]
Q2V2Y7_ARATH	5.899e-25	81.43	AT5G54190 protein OS=Arabidopsis thaliana GN=AT5G5...	[more]
Q8LAV9_ARATH	7.705e-25	81.43	Protochlorophyllide reductase OS=Arabidopsis thali...	[more]
D7MEF6_ARALY	7.705e-25	81.43	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B9DG36_ARATH	7.705e-25	81.43	AT4G27440 protein OS=Arabidopsis thaliana GN=At4g2...	[more]
D7TE52_VITVI	1.006e-24	80.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q9LKH8_PHAAU	1.716e-24	80.00	NADPH-protochlorophyllide oxidoreductase OS=Phaseo...	[more]
D7MTR3_ARALY	1.716e-24	81.43	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9LL34_SOLLC	2.242e-24	81.43	Light dependent NADH:protochlorophyllide oxidoredu...	[more]
B9T7M6_RICCO	2.928e-24	78.57	Short-chain dehydrogenase, putative OS=Ricinus com...	[more]

BLAST of Cicer_arietinum_v1_Contig12 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT5G54190.2	2.792e-27	81.43	\| Symbols: PORA \| protochlorophyllide oxidoreducta...	[more]
AT5G54190.1	2.792e-27	81.43	\| Symbols: PORA \| protochlorophyllide oxidoreducta...	[more]
AT4G27440.2	3.647e-27	81.43	\| Symbols: PORB \| protochlorophyllide oxidoreducta...	[more]
AT4G27440.1	3.647e-27	81.43	\| Symbols: PORB \| protochlorophyllide oxidoreducta...	[more]
AT1G03630.2	7.605e-25	75.71	\| Symbols: POR C, PORC \| protochlorophyllide oxido...	[more]
AT1G03630.1	7.605e-25	75.71	\| Symbols: POR C, PORC \| protochlorophyllide oxido...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002198	Short-chain dehydrogenase/reductase SDR	PANTHER	PTHR19410	SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER	coord: 7..43 score: 2.3
None	No IPR available	PANTHER	PTHR19410:SF100	PROTOCHLOROPHYLLIDE REDUCTASE	coord: 7..43 score: 2.3

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig12 ID=Cicer_arietinum_v1_Contig12; Name=Cicer_arietinum_v1_Contig12; organism=Cicer arietinum; type=contig; length=384bp
ACAGAAACTTTATAACCACTTTGCCACATGGTTGAATGATTTTATTGATC
CATGACTCCTACATAAAGGGAAAAAAAGCTCCTATCTAACAAAACAACAA
TTAATGCACTCAACATGACAATGCCTCTGCATAATGTTGGATGCTCTGAC
TTTAGGCCAAACCAACAAGCTTCTCACTAACCTCCCACACCTTGCGAGCC
TTCTCGACATCACTGGCCTCTTGGGATAACTGGTTTTCAAATGAACCAAA
AGCTTTGTTCCAGCTCCAGTAAACACCAGATTTTGTTAGGCTTGAATCAA
TTACAACCTCACCAAGTCTCTTTCCTGATTCTTCTTCTGAGACATGGAAT
TTGGTTATGTACCTCGGCCGCGACCACGCTAATC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR002198	DH_sc/Rdtase_SDR

Search form

Cicer_arietinum_v1_Contig12