Cicer_arietinum_v1_Contig1239

Contig Overview


Name	Cicer_arietinum_v1_Contig1239
Unique Name	Cicer_arietinum_v1_Contig1239
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	628

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR914358	EST	GR914358:1..312 +	Cicer arietinum unigene v1	n/a
GR914252	EST	GR914252:2..312 +	Cicer arietinum unigene v1	n/a
FE670688	EST	FE670688:240..628 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR914358	GR914358	Cicer arietinum	EST
GR914252	GR914252	Cicer arietinum	EST
FE670688	FE670688	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Match: B7FHR4_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.665e-65
Identity = 120/166 (72.29%), Postives = 135/166 (81.33%), Query Frame = -1

Query:   14 VFHQSSVVVMEIIGSLVTFIAPLWIAVIFGVVVGWAWKPKWAIDPNNYSW-TQFFKFRVPWNTDSDLXXXXXXXXXXXXXXXXXEKGLKCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEYLGR 508
            +F  SSV VM+I+G+LVTFIAPLWIAVIFGVVVGWAWKPKWAI+PNNYSW T  FKFR+PW   S+L                 EKGL+ +VTEHDL+ L KLVEEKDGGPAWIQMMDRSTP+M+YQAWRRDQE+GPPQYRSRTVFE+ASPELVRDFFWDDE+  R
Sbjct:    1 MFENSSVFVMDILGNLVTFIAPLWIAVIFGVVVGWAWKPKWAIEPNNYSWSTNLFKFRIPWFNYSELQNQPGLEYSATSSSGESEKGLRSIVTEHDLQNLCKLVEEKDGGPAWIQMMDRSTPNMTYQAWRRDQENGPPQYRSRTVFEDASPELVRDFFWDDEFRSR 166

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Match: D7KS64_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_892929 PE=4 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.048e-38
Identity = 85/151 (56.29%), Postives = 100/151 (66.23%), Query Frame = -1

Query:   23 LVTFIAPLWIAVIFGVVVGWAWKPKWA-IDPNNY---SWTQFFKFRVPWNTDSDLXXXXXXXXXXXXXXXXXEKGLKCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 463
            L+ F+APLWIAV  GV+VGW W+PKWA +D   +   S  +FFK        S                   EK     VT+ D R+L KLVE KDGGPAWIQMMDRSTP+ SYQAWRRD E+GPPQYRSRTVFE+A+PE+VRDFFWDDE+
Sbjct:   17 LLVFVAPLWIAVAAGVLVGWFWRPKWAYLDTKPFLSDSSPKFFKLPTSILKTSS---------HSLSSPQADEKEKSGFVTDDDFRHLWKLVEVKDGGPAWIQMMDRSTPTFSYQAWRRDPENGPPQYRSRTVFEDATPEMVRDFFWDDEF 158

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Match: B9RYW5_RICCO (Phosphatidylcholine transfer protein, putative OS=Ricinus communis GN=RCOM_1314180 PE=4 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.593e-38
Identity = 85/182 (46.70%), Postives = 107/182 (58.79%), Query Frame = -1

Query:   23 VMEIIGSLVTFIAPLWIAVIFGVVVGWAWKPKWA-------------------IDPNNYSWTQF--FKFRVP----WNTDSDLXXXXXXXXXXXXXXXXXE---KGLKCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 484
            V +++  L  F  PLW AVI GV+VGWAWKPKWA                      ++ S T F   +F++P    W  D+ +                     K    +V + DL +L K+V+EKDGGPAWIQMMDRSTP+M+YQAWRRD E+GPPQYRSRTVFE+A+PE VRDFFWDDE+
Sbjct:   16 VWDVLTELAMFTVPLWTAVIVGVLVGWAWKPKWANLGISSVCNDSANKVASPVAVESSSSITTFKSMRFQLPSCMSWVADNHIQIDSASAPPSLSSDCSSSQLEKETSSIVNDDDLEHLCKIVDEKDGGPAWIQMMDRSTPTMTYQAWRRDPETGPPQYRSRTVFEDATPEFVRDFFWDDEF 197

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Match: Q9XIR9_ARATH (Putative membrane related protein OS=Arabidopsis thaliana GN=At1g64720 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.611e-38
Identity = 85/164 (51.83%), Postives = 104/164 (63.41%), Query Frame = -1

Query:   23 SSVVVMEI----IGSLVTFIAPLWIAVIFGVVVGWAWKPKWA-IDPNNYSWT-QFFKFRVPWNTDSDLXXXXXXXXXXXXXXXXXEKGLKCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 496
            SS+V  E        L+ F+APLWIAV  GV+VGW W+PKWA +D    S + +F   ++P +                       K     VT+ D R+L KLVE KDGGP WIQMMDRSTP+ SYQAWRRD E+GPPQYRSRTVFE+A+PE+VRDFFWDDE+
Sbjct:    5 SSLVFTEFHSLGFSDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNSPKFLNLQLPTSI--------LKTSSHHVNPSLSSKEKTGFVTDDDFRHLWKLVEVKDGGPCWIQMMDRSTPTFSYQAWRRDPENGPPQYRSRTVFEDATPEMVRDFFWDDEF 160

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Match: Q9XF49_ARATH (Membrane related protein CP5 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.611e-38
Identity = 85/164 (51.83%), Postives = 104/164 (63.41%), Query Frame = -1

Query:   23 SSVVVMEI----IGSLVTFIAPLWIAVIFGVVVGWAWKPKWA-IDPNNYSWT-QFFKFRVPWNTDSDLXXXXXXXXXXXXXXXXXEKGLKCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 496
            SS+V  E        L+ F+APLWIAV  GV+VGW W+PKWA +D    S + +F   ++P +                       K     VT+ D R+L KLVE KDGGP WIQMMDRSTP+ SYQAWRRD E+GPPQYRSRTVFE+A+PE+VRDFFWDDE+
Sbjct:    5 SSLVFTEFHSLGFSDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNSPKFLNLQLPTSI--------LKTSSHHVNPSLSSKEKTGFVTDDDFRHLWKLVEVKDGGPCWIQMMDRSTPTFSYQAWRRDPENGPPQYRSRTVFEDATPEMVRDFFWDDEF 160

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Match: Q8L7P8_ARATH (Membrane related protein CP5, putative OS=Arabidopsis thaliana GN=At1g64720 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.611e-38
Identity = 85/164 (51.83%), Postives = 104/164 (63.41%), Query Frame = -1

Query:   23 SSVVVMEI----IGSLVTFIAPLWIAVIFGVVVGWAWKPKWA-IDPNNYSWT-QFFKFRVPWNTDSDLXXXXXXXXXXXXXXXXXEKGLKCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 496
            SS+V  E        L+ F+APLWIAV  GV+VGW W+PKWA +D    S + +F   ++P +                       K     VT+ D R+L KLVE KDGGP WIQMMDRSTP+ SYQAWRRD E+GPPQYRSRTVFE+A+PE+VRDFFWDDE+
Sbjct:    5 SSLVFTEFHSLGFSDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNSPKFLNLQLPTSI--------LKTSSHHVNPSLSSKEKTGFVTDDDFRHLWKLVEVKDGGPCWIQMMDRSTPTFSYQAWRRDPENGPPQYRSRTVFEDATPEMVRDFFWDDEF 160

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Match: B9I0R9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1094790 PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.918e-37
Identity = 80/153 (52.29%), Postives = 99/153 (64.71%), Query Frame = -1

Query:   23 EIIGSLVTFIAPLWIAVIFGVVVGWAWKPKWAIDPNNYSWTQFFKFRVPWN-TDSDLXXXXXXXXXXXXXXXXXEKGLKCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 478
            +++  L  F  PLW+AV  GV+VGW WKPKWA   +N S       +     + + L                 EK    +V E DL +L KLVE KDGGPAWIQMMDRSTP+M+YQAWRRD E+GPPQYR+RTVFE+A+PE+VRDFFWDDE+
Sbjct:   18 QVLSELFIFAIPLWVAVAIGVLVGWVWKPKWA---SNLSREMLLDAKQGGEFSATSLSTMIPSLNILKFHSSKMEKEKPNLVMEDDLEHLCKLVEVKDGGPAWIQMMDRSTPTMNYQAWRRDPETGPPQYRTRTVFEDATPEMVRDFFWDDEF 167

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Match: B9IDH8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1100582 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.680e-33
Identity = 72/156 (46.15%), Postives = 94/156 (60.26%), Query Frame = -1

Query:   23 VMEIIGSLVTFIAPLWIAVIFGVVVGWAWKPKWAIDPNNYSWTQFFKFRVPWNTDSDLXXXXXXXXXXXXXXXXXEKGLKCV--VTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 484
            ++ +   +V  + PLW+A + G+V+GW+WKPKW    ++       K       DS L                          VTE DL +L +LVE KDGGP W+ MMDRSTP+MSY+AWRRD ++GPPQYRS TVFENASPE+VRDFFWDD++
Sbjct:    1 MLGVCTEMVGLLGPLWVAFLIGLVLGWSWKPKWVTRESDKLTCCVSKI-----LDSSLPSSPCRSLMSPLKTFGSFSQWNSFIQVTEEDLEHLYQLVEVKDGGPTWMHMMDRSTPTMSYKAWRRDPKTGPPQYRSSTVFENASPEIVRDFFWDDDF 151

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Match: B9I215_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_891635 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.889e-33
Identity = 69/146 (47.26%), Postives = 93/146 (63.70%), Query Frame = -1

Query:   23 VTFIAPLWIAVIFGVVVGWAWKPKWAIDPNNYSWTQFFKFRVPWNTDSDLXXXXXXXXXXXXXXXXXEKGLKCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 460
            V F+ PLWI+ + G+++GW+WKPKW    ++   +   K       +S L                    +  +VTE DL++L++LVE KDGG  WI MMDRSTP+M YQAWRRD ++GPPQYRS TVFE+ASPE+VRD FWDD++
Sbjct:    9 VGFLGPLWISFLIGLIIGWSWKPKWVTRESDKLASCVSKI-----LESSLPSSPCRFLISQLNEEQ--SNIASLVTEEDLKHLNQLVEVKDGGSTWIHMMDRSTPTMRYQAWRRDPKTGPPQYRSSTVFEDASPEIVRDLFWDDDF 147

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Match: Q9FK24_ARATH (Membrane related protein-like OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.427e-32
Identity = 69/153 (45.10%), Postives = 93/153 (60.78%), Query Frame = -1

Query:   23 MEIIGSLVTFIAPLWIAVIFGVVVGWAWKPKWAIDPNNYSWTQFFKFRVPWNTDSDLXXXXXXXXXXXXXXXXXEKGLKCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 481
            M ++ S++  +   W+A + G+V+GWAWKP+W    NN       +   P + D  L                  + L   VTE DLR+L +LVE KDGG AWIQMMDR TP M YQAW R+ ++GP +YRSRTVFE+A+P ++RDFFWDDE+
Sbjct:    1 MALLESIILGLITGWLAFVIGLVIGWAWKPRWVSSSNNRQVK--LQCSAPRSFDLSLPSSSPSSVVTSPLKGFGSERLPNTVTELDLRHLVQLVERKDGGQAWIQMMDRFTPGMRYQAWLREPKNGPTEYRSRTVFEDATPVMLRDFFWDDEF 151

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide
Match: AT1G64720.1 (| Symbols: CP5 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr1:24046887-24048537 REVERSE LENGTH=385)

HSP 1 Score: 160.614 bits (405), Expect = 6.222e-40
Identity = 85/164 (51.83%), Postives = 104/164 (63.41%), Query Frame = -1

Query:   23 SSVVVMEI----IGSLVTFIAPLWIAVIFGVVVGWAWKPKWA-IDPNNYSWT-QFFKFRVPWNTDSDLXXXXXXXXXXXXXXXXXEKGLKCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 496
            SS+V  E        L+ F+APLWIAV  GV+VGW W+PKWA +D    S + +F   ++P +                       K     VT+ D R+L KLVE KDGGP WIQMMDRSTP+ SYQAWRRD E+GPPQYRSRTVFE+A+PE+VRDFFWDDE+
Sbjct:    5 SSLVFTEFHSLGFSDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNSPKFLNLQLPTSI--------LKTSSHHVNPSLSSKEKTGFVTDDDFRHLWKLVEVKDGGPCWIQMMDRSTPTFSYQAWRRDPENGPPQYRSRTVFEDATPEMVRDFFWDDEF 160

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide
Match: AT5G54170.1 (| Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr5:21985056-21987039 REVERSE LENGTH=449)

HSP 1 Score: 112.849 bits (281), Expect = 1.488e-25
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = -1

Query:   23 VTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 238
            VTE DLR+L +LVE KDGG AWIQMMDR TP M YQAW R+ ++GP +YRSRTVFE+A+P ++RDFFWDDE+
Sbjct:  129 VTELDLRHLVQLVERKDGGQAWIQMMDRFTPGMRYQAWLREPKNGPTEYRSRTVFEDATPVMLRDFFWDDEF 200

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide
Match: AT4G14500.2 (| Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr4:8334391-8336468 FORWARD LENGTH=294)

HSP 1 Score: 100.138 bits (248), Expect = 9.980e-22
Identity = 43/73 (58.90%), Postives = 59/73 (80.82%), Query Frame = -1

Query:   23 VVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 241
            +VTE+DL +L +L+E  +    W  MMD++TP+MSYQAWR + E+GP  YRSRTVFE+A+P++VRDFFWDDE+
Sbjct:  136 IVTENDLEHLLQLLEVGNAALEWQSMMDKTTPNMSYQAWRHEPETGPVIYRSRTVFEDATPDIVRDFFWDDEF 208

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide
Match: AT4G14500.1 (| Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr4:8334391-8337022 FORWARD LENGTH=433)

HSP 1 Score: 100.138 bits (248), Expect = 9.980e-22
Identity = 43/73 (58.90%), Postives = 59/73 (80.82%), Query Frame = -1

Query:   23 VVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 241
            +VTE+DL +L +L+E  +    W  MMD++TP+MSYQAWR + E+GP  YRSRTVFE+A+P++VRDFFWDDE+
Sbjct:  136 IVTENDLEHLLQLLEVGNAALEWQSMMDKTTPNMSYQAWRHEPETGPVIYRSRTVFEDATPDIVRDFFWDDEF 208

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide
Match: AT3G23080.2 (| Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr3:8207612-8209088 REVERSE LENGTH=388)

HSP 1 Score: 98.5969 bits (244), Expect = 2.904e-21
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = -1

Query:   23 KCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 247
            K VVTE DL +L  L+E  +    W  MMD+STP+MSYQAWR + E GP  YRSRTVFE+ +P++VRDFFWDDE+
Sbjct:   87 KDVVTEKDLEHLLHLLEAGNASFEWQSMMDKSTPNMSYQAWRHEPEIGPVVYRSRTVFEDVTPDIVRDFFWDDEF 161

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide
Match: AT3G23080.1 (| Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr3:8207612-8209181 REVERSE LENGTH=419)

HSP 1 Score: 98.5969 bits (244), Expect = 2.904e-21
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = -1

Query:   23 KCVVTEHDLRYLSKLVEEKDGGPAWIQMMDRSTPSMSYQAWRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 247
            K VVTE DL +L  L+E  +    W  MMD+STP+MSYQAWR + E GP  YRSRTVFE+ +P++VRDFFWDDE+
Sbjct:  118 KDVVTEKDLEHLLHLLEAGNASFEWQSMMDKSTPNMSYQAWRHEPEIGPVVYRSRTVFEDVTPDIVRDFFWDDEF 192

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide
Match: AT3G13062.1 (| Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr3:4184777-4186795 FORWARD LENGTH=403)

HSP 1 Score: 55.0694 bits (131), Expect = 3.682e-8
Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = -1

Query:   23 VVTEHDLRYL-SKLVEEKDGGPAWIQMMDRSTPSMSYQA-WRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 241
            +V++ DL+ L  KL E  +    W  ++ +S P +SY A   +  +  P +Y S TVFE+ SPE++RDF+ D+EY
Sbjct:   83 LVSDEDLKGLIQKLGERSEDAEIWEDVIKKSNPRISYTAKCCKPTDGSPMKYLSTTVFEDCSPEVLRDFYMDNEY 157

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide
Match: AT3G13062.2 (| Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr3:4184777-4187268 FORWARD LENGTH=440)

HSP 1 Score: 55.0694 bits (131), Expect = 3.682e-8
Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = -1

Query:   23 VVTEHDLRYL-SKLVEEKDGGPAWIQMMDRSTPSMSYQA-WRRDQESGPPQYRSRTVFENASPELVRDFFWDDEY 241
            +V++ DL+ L  KL E  +    W  ++ +S P +SY A   +  +  P +Y S TVFE+ SPE++RDF+ D+EY
Sbjct:   83 LVSDEDLKGLIQKLGERSEDAEIWEDVIKKSNPRISYTAKCCKPTDGSPMKYLSTTVFEDCSPEVLRDFYMDNEY 157

[Close]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide
Match: AT1G55960.1 (| Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr1:20927962-20929825 REVERSE LENGTH=403)

HSP 1 Score: 51.9878 bits (123), Expect = 3.117e-7
Identity = 29/77 (37.66%), Postives = 47/77 (61.04%), Query Frame = -1

Query:   23 VVTEHDLRYLSKLVEEK--DGGPAWIQMMDRSTPSMSYQAWRRDQESG--PPQYRSRTVFENASPELVRDFFWDDEY 241
            +V++ DL++L + +EE+  D    W  ++ +S   +SY A R   + G  P +Y S TVFE  S E+VRDF+ D++Y
Sbjct:   82 LVSDEDLKFLIENLEEETNDSTEIWEHVIHKSNDRISYSAKRCKPKDGGGPMKYLSVTVFEGFSAEIVRDFYMDNDY 158

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig1239 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FHR4_MEDTR	1.665e-65	72.29	Putative uncharacterized protein (Fragment) OS=Med...	[more]
D7KS64_ARALY	5.048e-38	56.29	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B9RYW5_RICCO	6.593e-38	46.70	Phosphatidylcholine transfer protein, putative OS=...	[more]
Q9XIR9_ARATH	8.611e-38	51.83	Putative membrane related protein OS=Arabidopsis t...	[more]
Q9XF49_ARATH	8.611e-38	51.83	Membrane related protein CP5 OS=Arabidopsis thalia...	[more]
Q8L7P8_ARATH	8.611e-38	51.83	Membrane related protein CP5, putative OS=Arabidop...	[more]
B9I0R9_POPTR	1.918e-37	52.29	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9IDH8_POPTR	1.680e-33	46.15	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9I215_POPTR	4.889e-33	47.26	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9FK24_ARATH	2.427e-32	45.10	Membrane related protein-like OS=Arabidopsis thali...	[more]

BLAST of Cicer_arietinum_v1_Contig1239 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 9


Match Name	E-value	Identity	Description
AT1G64720.1	6.222e-40	51.83	\| Symbols: CP5 \| Polyketide cyclase/dehydrase and ...	[more]
AT5G54170.1	1.488e-25	69.44	\| Symbols: \| Polyketide cyclase/dehydrase and lip...	[more]
AT4G14500.2	9.980e-22	58.90	\| Symbols: \| Polyketide cyclase/dehydrase and lip...	[more]
AT4G14500.1	9.980e-22	58.90	\| Symbols: \| Polyketide cyclase/dehydrase and lip...	[more]
AT3G23080.2	2.904e-21	60.00	\| Symbols: \| Polyketide cyclase/dehydrase and lip...	[more]
AT3G23080.1	2.904e-21	60.00	\| Symbols: \| Polyketide cyclase/dehydrase and lip...	[more]
AT3G13062.1	3.682e-8	38.67	\| Symbols: \| Polyketide cyclase/dehydrase and lip...	[more]
AT3G13062.2	3.682e-8	38.67	\| Symbols: \| Polyketide cyclase/dehydrase and lip...	[more]
AT1G55960.1	3.117e-7	37.66	\| Symbols: \| Polyketide cyclase/dehydrase and lip...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 1..22 score: NAcoord: 28..43 score
None	No IPR available	GENE3D	3.30.530.20	no description	coord: 99..172 score: 2.5
None	No IPR available	PANTHER	PTHR19308	PHOSPHATIDYLCHOLINE TRANSFER PROTEIN	coord: 102..171 score: 1.3
None	No IPR available	SEG	seg	seg	coord: 77..94 score
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 100..172 score: 5.1

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig1239 ID=Cicer_arietinum_v1_Contig1239; Name=Cicer_arietinum_v1_Contig1239; organism=Cicer arietinum; type=contig; length=628bp
GATTAGCGTGGTCGCGGCCGAGGTACTCATCATCCCAAAAGAAATCCCTA
ACCAGCTCCGGGCTCGCATTTTCAAACACTGTTCTACTGCGATATTGTGG
CGGCCCACTCTCTTGGTCCCTACGCCAAGCTTGGTAACTCATAGATGGTG
TAGAACGATCCATCATCTGAATCCAAGCGGGCCCACCATCTTTTTCCTCA
ACCAACTTACTTAAATAACGCAAATCATGTTCCGTCACTACACACTTCAA
TCCCTTTTCACTTTCCGAAGAACCAGAACTGGTGGAGTATGATGAACCGG
GTTGACTTTGAAGGTCCGAATCAGTATTCCAAGGGACCCGAAACTTGAAG
AATTGAGTCCAAGAATAGTTATTCGGGTCGATGGCCCATTTAGGTTTCCA
GGCCCAACCAACAACAACACCGAAGATAACGGCAATCCATAGGGGAGCTA
TGAAAGTAACGAGGCTTCCAATTATTTCCATAACAACAACGGAGGATTGG
TGAAAAACTCCGATTAAAGACATGGAAACGAAGAGTTGTTATAAATTAAT
CCTCGGTGGAATCGAAAGGATAAGCGTGAGAGTACAGCGATTATTGTTGT
TGTTGAAAGTGGAGGAATTCGAATCCTG

Search form

Cicer_arietinum_v1_Contig1239