Cicer_arietinum_v1_Contig1258
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Cicer_arietinum_v1_Contig1258 vs. SwissProt
Match: AGP16_ARATH (Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.852e-9 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 100 MAAPKHSFGFGVVAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSADISSTF 324 MA+ GF + + + +I +L+ +QSLAPAPAPTSDG+S+DQGIAY TY+IH D SS++ Sbjct: 1 MASRNSVTGFALFSFVFAVILSLA-----GAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIHPLDASSSY 70
BLAST of Cicer_arietinum_v1_Contig1258 vs. SwissProt
Match: AGP20_ARATH (Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.298e-9 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 133 VVAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSADISST 321 V+A+ A +FA+ P A +QSLAPAP+PTSDG+S+DQGIAY TY+IH D SS+ Sbjct: 9 VIALFA-FVFAVISPFA-GAQSLAPAPSPTSDGTSIDQGIAYLLMVVALVLTYLIHPLDASSS 69
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Match: C6SV73_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.222e-15 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 100 MAAPKHSFGFGVVA-MLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSA 306 MA+ + SFGFGVVA ++ +LIF L +P AVH+QSLAPAPAPTSDG+S+DQGIAY TY+IHS+ Sbjct: 1 MASFRFSFGFGVVAAVVLSLIFTLYMPVAVHAQSLAPAPAPTSDGTSIDQGIAYVLMMLALALTYLIHSS 70
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Match: B9RCN6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1691010 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.341e-10 Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 142 MLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSADISSTF 324 ++ LIFA++LP V +QS APAPAPTSDG+S+DQGIAY TY+IH+AD++ +F Sbjct: 10 VVVALIFAIALP--VQAQSSAPAPAPTSDGTSIDQGIAYVLMLVALVLTYLIHAADLTCSF 68
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Match: C5YUS6_SORBI (Putative uncharacterized protein Sb09g007150 OS=Sorghum bicolor GN=Sb09g007150 PE=4 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 3.462e-9 Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 136 VAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSADISSTF 324 +A+ A L+FA+++PA +Q APAPAPTSDG+S+DQGIAY TY+IH D SS + Sbjct: 34 LAIAAALVFAVAMPAVADAQ--APAPAPTSDGTSIDQGIAYLLMIVALVLTYLIHPLDASSPY 94
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Match: A9PA79_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_646717 PE=4 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 3.462e-9 Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 1 Query: 133 VVAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSADISSTF 324 VVA+L ++FA+ LP A Q+ APAPAPTSDG+S+DQGIAY TY+IH+AD+S +F Sbjct: 11 VVALL--VVFAIVLPIA---QAQAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHAADLSHSF 69
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Match: B6SMF8_MAIZE (AGP16 OS=Zea mays PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 7.713e-9 Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 130 GVVAM-LATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSADISSTF 324 G VAM +A L+FA+ +PAA +Q APAPAPTSDG+S+D GIAY TY+IH D SS + Sbjct: 9 GAVAMAVAALVFAILMPAAAAAQ--APAPAPTSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPY 72
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Match: D7TVC5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019489001 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.007e-8 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 133 VVAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIH 300 V+ LA L+F ++LPA V +QS+APAPAPTSDG ++DQGIAY TYIIH Sbjct: 7 VLMALAVLVFVIALPA-VRAQSIAPAPAPTSDGITIDQGIAYVLMLLALVLTYIIH 61
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Match: B9I537_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_569476 PE=4 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.007e-8 Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 118 SFGFGVVAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIH 300 + FGV A + +IFA+S+P A H QS APAP+PTSDG+++DQG+A TY+IH Sbjct: 5 NISFGVFAAIVAIIFAISMPLA-HGQSSAPAPSPTSDGAAIDQGVACILMLVALVLTYLIH 64
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Match: Q8L9T8_ARATH (At5g24105 OS=Arabidopsis thaliana GN=At5g24105 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.244e-8 Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 136 VAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIH 300 V+ + ++IFA+ LP A H+QS APAPAPTSDG+++DQGIAY TY+IH Sbjct: 10 VSTIVSIIFAILLPMA-HAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTYLIH 63
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Match: B9GL90_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_548369 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.931e-8 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 136 VAMLATLIFALSLPAAVH---SQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSADISSTF 324 V+ +A + AL+L +A +Q+ APAPAPTSDG+S+DQGIAY TY+IH+AD+S +F Sbjct: 4 VSRIAVAVVALALASAFVLPVAQAQAPAPAPTSDGTSIDQGIAYVLMLVALVLTYLIHAADLSHSF 69
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Match: A5AM00_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012134 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.931e-8 Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 133 VVAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSAD 309 VV + L++A+ LP+A H+QSLAPAPAPTSDG+++DQGIA TY+IH D Sbjct: 9 VVVAIIALLYAVVLPSA-HAQSLAPAPAPTSDGTAIDQGIACVLMLVALVLTYLIHPLD 66
BLAST of Cicer_arietinum_v1_Contig1258 vs. TAIR peptide
Match: AT5G24105.1 (| Symbols: AGP41 | arabinogalactan protein 41 | chr5:8152097-8152656 FORWARD LENGTH=63) HSP 1 Score: 62.3882 bits (150), Expect = 1.807e-10 Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 136 VAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIH 300 V+ + ++IFA+ LP A H+QS APAPAPTSDG+++DQGIAY TY+IH Sbjct: 10 VSTIVSIIFAILLPMA-HAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTYLIH 63
BLAST of Cicer_arietinum_v1_Contig1258 vs. TAIR peptide
Match: AT2G46330.1 (| Symbols: AGP16, ATAGP16 | arabinogalactan protein 16 | chr2:19018730-19019108 REVERSE LENGTH=73) HSP 1 Score: 61.6178 bits (148), Expect = 3.083e-10 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 100 MAAPKHSFGFGVVAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSADISSTF 324 MA+ GF + + + +I +L+ +QSLAPAPAPTSDG+S+DQGIAY TY+IH D SS++ Sbjct: 1 MASRNSVTGFALFSFVFAVILSLA-----GAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIHPLDASSSY 70
BLAST of Cicer_arietinum_v1_Contig1258 vs. TAIR peptide
Match: AT3G61640.1 (| Symbols: AGP20, AtAGP20 | arabinogalactan protein 20 | chr3:22810283-22810629 REVERSE LENGTH=74) HSP 1 Score: 60.077 bits (144), Expect = 8.970e-10 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 133 VVAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIHSADISST 321 V+A+ A +FA+ P A +QSLAPAP+PTSDG+S+DQGIAY TY+IH D SS+ Sbjct: 9 VIALFA-FVFAVISPFA-GAQSLAPAPSPTSDGTSIDQGIAYLLMVVALVLTYLIHPLDASSS 69
BLAST of Cicer_arietinum_v1_Contig1258 vs. TAIR peptide
Match: AT5G53250.1 (| Symbols: AGP22, ATAGP22 | arabinogalactan protein 22 | chr5:21603715-21604007 FORWARD LENGTH=63) HSP 1 Score: 50.447 bits (119), Expect = 7.107e-7 Identity = 26/61 (42.62%), Postives = 34/61 (55.74%), Query Frame = 1 Query: 118 SFGFGVVAMLATLIFALSLPAAVHSQSLAPAPAPTSDGSSVDQGIAYXXXXXXXXXTYIIH 300 S F + + +I ++ L S S +PAPAPTSDG+S+DQGIAY TY IH Sbjct: 3 SLKFPLEILAVFVIISVILLPIAQSHSSSPAPAPTSDGTSIDQGIAYVLMMVALALTYFIH 63 The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1258 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 2
BLAST of Cicer_arietinum_v1_Contig1258 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of Cicer_arietinum_v1_Contig1258 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig1258 ID=Cicer_arietinum_v1_Contig1258; Name=Cicer_arietinum_v1_Contig1258; organism=Cicer arietinum; type=contig; length=546bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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