Cicer_arietinum_v1_Contig1311

Contig Overview
NameCicer_arietinum_v1_Contig1311
Unique NameCicer_arietinum_v1_Contig1311
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length631
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR916486ESTGR916486:1..461 +Cicer arietinum unigene v1n/a
HO066823ESTHO066823:319..563 +Cicer arietinum unigene v1n/a
HO066751ESTHO066751:285..631 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR916486GR916486Cicer arietinumEST
HO066823HO066823Cicer arietinumEST
HO066751HO066751Cicer arietinumEST


Homology
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BLAST of Cicer_arietinum_v1_Contig1311 vs. TrEMBL
Match: Q2PEY6_TRIPR (Putative NAD dependent epimerase OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.604e-7
Identity = 27/33 (81.82%), Postives = 28/33 (84.85%), Query Frame = 2 
Query:   35 GLRKFVKWYVRYYGIQSRLKKENHNDNELPEDS 133
            GLRKFVKWYVRYYGIQ RLKKEN  DNE P+ S
Sbjct:  418 GLRKFVKWYVRYYGIQPRLKKENRIDNEQPDGS 450
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1311 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q2PEY6_TRIPR1.604e-781.82Putative NAD dependent epimerase OS=Trifolium prat... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 12..25
score: NAcoord: 29..52
score
NoneNo IPR availableSEGsegsegcoord: 82..108
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1311 ID=Cicer_arietinum_v1_Contig1311; Name=Cicer_arietinum_v1_Contig1311; organism=Cicer arietinum; type=contig; length=631bp
GATTTCGAGCGGCCGCCCGGGCAGGTACGCTGGGGGTCTCAGAAAATTCG
TTAAGTGGTATGTTCGTTATTACGGGATTCAGTCGAGGCTAAAAAAGGAA
AATCACAATGATAATGAATTACCCGAGGATTCCGCTTGATTGCTGGCTTG
GCTGGTTATTATTCTCCTTGCATCACATGCCTCTCATTTTCAAAAGAAAA
ACAAACTTTTTCATTTTTCTTGTTTTGCTTTGTTAAATTATTATTGTTAT
TATTATAATTATTTTTTCTTTTTGTTAAAATGTTGTTAATTATTATTGTG
TCGGTCCGTGTGGATGAGACTGACGGTGAATTAAGTTGTTGATGTGGCAA
ATATAGATTTATATATATAAATTTGGTATAGAAGAAACAAGGACATAAAT
GTGAAAGAAACAGAAAGCAAAAGTAAGGAAATTGAAGGAGGAAGTGTAGA
TCTGTGAGTTGGGGGAAGGAAAGAAGGGAGGTGTAATAATGGTGAGTGGG
GTCTATTAACAAAGGTTGTAGATCTCTCTTTTATTCATAATATATTTTCA
AGAAAAAGAAATTGAAAGAAATAATGTTGTTATTNTTGATCAAATATTAT
TGTGNCATAAAACCAGGCTANCCTGTTTTTC
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