Cicer_arietinum_v1_Contig1351

Contig Overview


Name	Cicer_arietinum_v1_Contig1351
Unique Name	Cicer_arietinum_v1_Contig1351
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	696

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GR912530	EST	GR912530:89..345 +
GR915975	EST	GR915975:1..495 +
ES560367	EST	ES560367:27..696 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR912530	GR912530	Cicer arietinum	EST
GR915975	GR915975	Cicer arietinum	EST
ES560367	ES560367	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. SwissProt
Match: HDT1_SOYBN (Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.747e-30
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1

Query:  193 TPVKKVDQGKKRPNESASKTPVSNKKSKNATPEKTDGKKSGHAATPHP-KKGAKTPNS-ESKSPKSGGHLSCKSCSQDF 423
            TP KKVDQGKKRPNESA+KTP+S KK+K ATPEKTDGKKS H ATPHP KKG KTPNS + ++P S G LSC SC + F
Sbjct:  200 TPAKKVDQGKKRPNESAAKTPISAKKAKTATPEKTDGKKSVHVATPHPSKKGGKTPNSTKGQTPNSAGQLSCASCKKSF 278

HSP 2 Score: 34.6538 bits (78), Expect = 9.747e-30
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 2

Query:  416 KTFNSETGLLQHSKAKHGGQ 475
            K+F +E GL QH KAKHGGQ
Sbjct:  276 KSFTNEAGLQQHKKAKHGGQ 295

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. SwissProt
Match: HDT2_MAIZE (Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.476e-19
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNATP--EKTDGKKSG-HAATPHPKKGAKTPNSE---SKSPKSGGHLSCKSCSQDF 423
            KK + GKKR  E+A KTP+S+KK+K ATP  +KT GKK   H ATPHP KG    N++    KSPKSGG + CKSCS+ F
Sbjct:  207 KKPEAGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAKGKTPANNDKLTEKSPKSGGSVPCKSCSKTF 286

HSP 2 Score: 35.039 bits (79), Expect = 1.476e-19
Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHGGQ 475
            K+ +KTFNSE  L  HSKAKHG +
Sbjct:  280 KSCSKTFNSEMALQAHSKAKHGAK 303

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. SwissProt
Match: HDT1_SOLCH (Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.442e-15
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNATPEKTDGKK-SGHAATPHPKKGAKTPNSESKSPKSGGHLSCKSCSQDF 423
            KK +  K+R  +SA+KTPV++KK+K  TP+KTDGKK  GH ATPHP K A      SK+PKS G   CK C++ F
Sbjct:  183 KKAEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQA------SKTPKSAGSHHCKPCNRSF 251

HSP 2 Score: 24.6386 bits (52), Expect = 1.442e-15
Identity = 11/21 (52.38%), Postives = 13/21 (61.90%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKH 466
            K   ++F SE  L  HSKAKH
Sbjct:  245 KPCNRSFGSEGALDSHSKAKH 265

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. SwissProt
Match: HDT1_MAIZE (Histone deacetylase HDT1 OS=Zea mays GN=HDT1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.981e-15
Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = 1

Query:  202 KKVDQGKKRPNESAS-KTPVSNKKSKNATP--EKTDGKKSG--HAATPHPKKGA------KTPNSESKSPKSGGHLSCKSCSQDF 423
            KK + GKKRP ES+  KTP+S+KK+K ATP  +KT GKK    H ATPHP KG       K+  S   +PKSGG + CK CS+ F
Sbjct:  201 KKPEVGKKRPAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAKGKTIVNNDKSVKSPKSAPKSGGSVPCKPCSKSF 285

HSP 2 Score: 26.1794 bits (56), Expect = 8.981e-15
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHG 469
            K  +K+F SET L  HS+AK G
Sbjct:  279 KPCSKSFISETALQAHSRAKMG 300

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. SwissProt
Match: HDT3_MAIZE (Histone deacetylase HDT3 OS=Zea mays GN=HDT3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.561e-14
Identity = 43/83 (51.81%), Postives = 53/83 (63.86%), Query Frame = 1

Query:  202 KKVDQGKKRPNESAS-KTPVSNKKSKNATP--EKTDGKKSG--HAATPHPKKGAKTPNSES--KSPKSG--GHLSCKSCSQDF 423
            KK + GKKR  ES+  KTP+S+KK+K ATP  +KT GKK    H ATPHP KG    N++   KSPKS     + CKSCS+ F
Sbjct:  201 KKPEVGKKRAAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAKGKTIVNNDKSVKSPKSAPKSGVPCKSCSKSF 283

HSP 2 Score: 31.9574 bits (71), Expect = 2.561e-14
Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHGGQ 475
            K+ +K+F SET    HSKAKHGG+
Sbjct:  277 KSCSKSFISETAPQAHSKAKHGGK 300

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. SwissProt
Match: HDT2_ARATH (Histone deacetylase HDT2 OS=Arabidopsis thaliana GN=HDT2 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.818e-14
Identity = 45/76 (59.21%), Postives = 52/76 (68.42%), Query Frame = 1

Query:  193 TPVKKVDQGKKRPNESASKTPVSNKKSKNA-----TPEKT-DGKKSGHAATPHP-KKGAKTPNSESKSPKSGGHLS 399
            TP K     KKRPNES SKTPVS KK+K A     TP+KT + KK GH ATPHP KKG K+P + ++SPKSGG  S
Sbjct:  199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSS 274

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. SwissProt
Match: HDT3_ARATH (Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.478e-14
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 1

Query:  202 KKVDQGKKRPNE-SASKTPVSNKKSKNATPEKTDGKKSG-HAATPHPKK-------GAKT--PNSESKSPKSGGHLSCKSCSQDF 423
            KK ++ KKR  E ++SK P SNKK+K  TP+KTD KK   H ATPHP K       G  T   + + ++PKS G   CKSC++ F
Sbjct:  192 KKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTF 276

HSP 2 Score: 30.0314 bits (66), Expect = 9.478e-14
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKH 466
            K+  +TF SE GL  H+KAKH
Sbjct:  270 KSCTRTFTSEMGLQSHTKAKH 290

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. SwissProt
Match: HDT1_ARATH (Histone deacetylase HDT1 OS=Arabidopsis thaliana GN=HDT1 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 3.336e-7
Identity = 36/79 (45.57%), Postives = 42/79 (53.16%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNA-TPEKTDGKKSGHAATPHPKKGAKTPNSESKSPKSGGHLSCKSCSQDFQLRN 435
            KK    KKR NE+  K PVS KK+K A TP+KTD K          KKG K  N   +SPKS   +SC SC + F   N
Sbjct:  166 KKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEK----------KKGGKAAN---QSPKSASQVSCGSCKKTFNSGN 231

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Match: C6TGQ0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.498e-31
Identity = 75/146 (51.37%), Postives = 83/146 (56.85%), Query Frame = 1

Query:   34 KSGGPAKQVKVVDPKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----TPVKKVDQGKKRPNESASKTPVSNKKSKNATPEKTDGKKSGHAATPHP-KKGAKTPNSE-----------SKSPKSGGHLSCKSCSQDF 423
            K+ G AKQVKVV+PKK                                         TP KKVD GKKRPNESASKTPVS+KK+KNATPEKTDGKK GH ATPHP KKG KTPN E           +K+PKSGG LSCK+CS+ F
Sbjct:  145 KASGSAKQVKVVEPKKDNEEDSDDDSDDDDFGSSDEEMEDADSDSDDESGDEDDDEETPPKKVDLGKKRPNESASKTPVSSKKAKNATPEKTDGKKGGHTATPHPAKKGGKTPNREAKAKTPNSEAKAKTPKSGG-LSCKTCSKSF 289

HSP 2 Score: 37.7354 bits (86), Expect = 1.498e-31
Identity = 15/24 (62.50%), Postives = 20/24 (83.33%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHGGQ 475
            K  +K+F +E+GL QH+KAKHGGQ
Sbjct:  283 KTCSKSFTNESGLQQHNKAKHGGQ 306

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Match: C6TJ33_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.239e-30
Identity = 61/84 (72.62%), Postives = 67/84 (79.76%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNATPEKTDGKKSGHAATPHP-KKG---------AKTPNSESKSPKSGGHLSCKSCSQDF 423
            KK D GKKRPNESASKTPVS+KK+KNATPEKTDGKK GH ATPHP KKG         AKTPN+E+K+P SGG LSCKSCS+ F
Sbjct:  208 KKADLGKKRPNESASKTPVSSKKAKNATPEKTDGKKGGHTATPHPAKKGGKTPSSEAKAKTPNNEAKTPMSGG-LSCKSCSKSF 290

HSP 2 Score: 41.5874 bits (96), Expect = 1.239e-30
Identity = 17/24 (70.83%), Postives = 22/24 (91.67%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHGGQ 475
            K+ +K+FNSE+GL QH+KAKHGGQ
Sbjct:  284 KSCSKSFNSESGLQQHNKAKHGGQ 307

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Match: B9SN80_RICCO (Histone deacetylase 2a, putative OS=Ricinus communis GN=RCOM_1186440 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.916e-20
Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNATPEKT-DGKKSGHAATPHPKKGAK------TPNSESKSPKSGGHLSCKSCSQDF 423
            KK D+GKKR N+SA KTPVS+KK+K  TP+KT DGKK GH ATPHP KGAK      TP  ++++PKSGG  SC SC + F
Sbjct:  213 KKADKGKKRQNDSAVKTPVSSKKAKLITPQKTADGKKGGHTATPHPAKGAKASANGNTPKPQTQTPKSGGKFSCNSCERSF 293

HSP 2 Score: 24.6386 bits (52), Expect = 1.916e-20
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 2

Query:  416 KTFNSETGLLQHSKAKHGGQ 475
            ++F S+  L  HSKAKH  +
Sbjct:  291 RSFGSDAALQSHSKAKHSSK 310

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Match: D7SN59_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031404001 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.049e-20
Identity = 55/87 (63.22%), Postives = 62/87 (71.26%), Query Frame = 1

Query:  193 TPVKKVDQGKKRPNESASKTPVSNKKSKNATPEKTDGKKSG-HAATPHP-KKGAKTPNSESK----SPKSGGHLSCKSCSQDFQLRN 435
            TP KKV+ GKKRP ESA+KTPV  KK+K  +P+KTDGKK G H ATPHP KK  KTP S  K    SPKSGG +SCKSCS+ F   N
Sbjct:  254 TPKKKVEPGKKRPTESATKTPVPAKKAKLVSPQKTDGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKSGGQVSCKSCSKTFNSEN 340

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Match: B4FHA8_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.287e-18
Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNATP--EKTDGKKSG-HAATPHPKKGAKTP----NSESKSPKSGGHLSCKSCSQDF 423
            KK + GKKR  E+A KTP+S+KK+K ATP  +KT GKK   H ATPHP KG KTP     S  KSPKSGG + CKSCS+ F
Sbjct:  207 KKPEAGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAKG-KTPANNDKSTEKSPKSGGSVPCKSCSKTF 286

HSP 2 Score: 35.039 bits (79), Expect = 1.287e-18
Identity = 15/24 (62.50%), Postives = 18/24 (75.00%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHGGQ 475
            K+ +KTFNSE  L  HSKAKHG +
Sbjct:  280 KSCSKTFNSEMALQAHSKAKHGAK 303

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Match: C5YUI2_SORBI (Putative uncharacterized protein Sb09g026730 OS=Sorghum bicolor GN=Sb09g026730 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.288e-18
Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 1

Query:  193 TPVKKVDQGKKRPNESASKTPVSNKKSKNATP--EKTDGKKSG-HAATPHPKKGAKTP----NSESKSPKSGGHLSCKSCSQDF 423
            TP KK + GKKRP E+ S TP+S+KK+K ATP  +KT GKK   H ATPHP KG KTP     S+ KSPKSGG + CKSC++ F
Sbjct:  201 TPKKKPEAGKKRPAEN-SLTPLSDKKAKVATPSAQKTGGKKGAVHVATPHPAKG-KTPANNDKSKEKSPKSGGSVPCKSCTKTF 282

HSP 2 Score: 34.6538 bits (78), Expect = 1.288e-18
Identity = 15/24 (62.50%), Postives = 17/24 (70.83%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHGGQ 475
            K+  KTFNSE  L  HSKAKHG +
Sbjct:  276 KSCTKTFNSEMALQAHSKAKHGAK 299

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Match: B9HQL3_POPTR (Histone deacetylase OS=Populus trichocarpa GN=HDT901 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.840e-18
Identity = 45/75 (60.00%), Postives = 55/75 (73.33%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNATPEKTDGKKSGHAATPHPKKGAKTPN-SESKSPKSGGHLSCKSCSQDF 423
            KK +  KKR  +SA+KTPVS+KK+K ATP+KTD KK+G   TPHP KG    N + SKSPKSGG+ SCKSC + F
Sbjct:  185 KKAETSKKRATDSATKTPVSSKKAKTATPQKTDAKKAGQV-TPHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAF 258

HSP 2 Score: 25.7942 bits (55), Expect = 2.840e-18
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHGGQ 475
            K+  K F ++  L  HS+AKHG +
Sbjct:  252 KSCDKAFGTDGALKSHSQAKHGAK 275

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Match: A9P9Y3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.692e-18
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNATPEKTDGKKSGHAATPHPKKGAKTPNSES-KSPKSGGHLSCKSCSQDF 423
            KK +Q KKR ++SA KTPVS+KK+K ATP+KTDG K+G   TPHP KG    N  + K+PKSGG+ SCKSC + F
Sbjct:  189 KKAEQSKKRTSDSAIKTPVSSKKAKTATPQKTDGGKAGQV-TPHPAKGEAASNGNNPKTPKSGGNFSCKSCERSF 262

HSP 2 Score: 26.1794 bits (56), Expect = 3.692e-18
Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHG 469
            K+  ++F S+  L  HS+AKHG
Sbjct:  256 KSCERSFGSDGALKSHSQAKHG 277

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Match: A9P950_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.692e-18
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNATPEKTDGKKSGHAATPHPKKGAKTPNSES-KSPKSGGHLSCKSCSQDF 423
            KK +Q KKR ++SA KTPVS+KK+K ATP+KTDG K+G   TPHP KG    N  + K+PKSGG+ SCKSC + F
Sbjct:  189 KKAEQSKKRTSDSAIKTPVSSKKAKTATPQKTDGGKAGQV-TPHPAKGKAASNGNNPKTPKSGGNFSCKSCERSF 262

HSP 2 Score: 26.1794 bits (56), Expect = 3.692e-18
Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHG 469
            K+  ++F S+  L  HS+AKHG
Sbjct:  256 KSCERSFGSDGALKSHSQAKHG 277

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Match: A9P996_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.056e-17
Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNATPEKTDGKKSGHAATPHPKKGAKTPN-SESKSPKSGGHLSCKSCSQDF 423
            KK +  KKR  +SA+KTPVS+KK+K ATP KTD KK+G   TPHP KG    N + SKSPKSGG+ SCKSC + F
Sbjct:  185 KKAETSKKRATDSATKTPVSSKKAKTATPLKTDAKKAGQV-TPHPAKGKAAANGNSSKSPKSGGNFSCKSCDKAF 258

HSP 2 Score: 25.7942 bits (55), Expect = 1.056e-17
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKHGGQ 475
            K+  K F ++  L  HS+AKHG +
Sbjct:  252 KSCDKAFGTDGALKSHSQAKHGAK 275

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TAIR peptide
Match: AT5G22650.2 (| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 | histone deacetylase 2B | chr5:7534120-7536054 FORWARD LENGTH=305)

HSP 1 Score: 83.5741 bits (205), Expect = 1.151e-16
Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 1

Query:  193 TPVKKVDQGKKRPNESASKTPVSNKKSKNA-----TPEKTDGKKSGHAATPHP-KKGAKTPNSESKSPKSGGHLS 399
            TP K     KKRPNES SKTPVS KK+K A     TP+KT+ KK GH ATPHP KKG K+P + ++SPKSGG  S
Sbjct:  199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSS 273

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TAIR peptide
Match: AT5G22650.1 (| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2, ATHD2 | histone deacetylase 2B | chr5:7534120-7536054 FORWARD LENGTH=306)

HSP 1 Score: 78.9518 bits (193), Expect = 2.835e-15
Identity = 45/76 (59.21%), Postives = 52/76 (68.42%), Query Frame = 1

Query:  193 TPVKKVDQGKKRPNESASKTPVSNKKSKNA-----TPEKT-DGKKSGHAATPHP-KKGAKTPNSESKSPKSGGHLS 399
            TP K     KKRPNES SKTPVS KK+K A     TP+KT + KK GH ATPHP KKG K+P + ++SPKSGG  S
Sbjct:  199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSS 274

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TAIR peptide
Match: AT5G03740.1 (| Symbols: HD2C, HDT3 | histone deacetylase 2C | chr5:981994-983961 FORWARD LENGTH=294)

HSP 1 Score: 67.3958 bits (163), Expect = 9.496e-15
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 1

Query:  202 KKVDQGKKRPNE-SASKTPVSNKKSKNATPEKTDGKKSG-HAATPHPKK-------GAKT--PNSESKSPKSGGHLSCKSCSQDF 423
            KK ++ KKR  E ++SK P SNKK+K  TP+KTD KK   H ATPHP K       G  T   + + ++PKS G   CKSC++ F
Sbjct:  192 KKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTF 276

HSP 2 Score: 30.0314 bits (66), Expect = 9.496e-15
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 2

Query:  404 KAAAKTFNSETGLLQHSKAKH 466
            K+  +TF SE GL  H+KAKH
Sbjct:  270 KSCTRTFTSEMGLQSHTKAKH 290

[Close]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TAIR peptide
Match: AT3G44750.2 (| Symbols: HDA3 | histone deacetylase 3 | chr3:16298045-16299585 FORWARD LENGTH=242)

HSP 1 Score: 55.4546 bits (132), Expect = 3.357e-8
Identity = 36/79 (45.57%), Postives = 42/79 (53.16%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNA-TPEKTDGKKSGHAATPHPKKGAKTPNSESKSPKSGGHLSCKSCSQDFQLRN 435
            KK    KKR NE+  K PVS KK+K A TP+KTD K          KKG K  N   +SPKS   +SC SC + F   N
Sbjct:  163 KKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEK----------KKGGKAAN---QSPKSASQVSCGSCKKTFNSGN 228

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BLAST of Cicer_arietinum_v1_Contig1351 vs. TAIR peptide
Match: AT3G44750.1 (| Symbols: HD2A, ATHD2A, HDA3, HDT1 | histone deacetylase 3 | chr3:16298045-16299585 FORWARD LENGTH=245)

HSP 1 Score: 55.4546 bits (132), Expect = 3.357e-8
Identity = 36/79 (45.57%), Postives = 42/79 (53.16%), Query Frame = 1

Query:  202 KKVDQGKKRPNESASKTPVSNKKSKNA-TPEKTDGKKSGHAATPHPKKGAKTPNSESKSPKSGGHLSCKSCSQDFQLRN 435
            KK    KKR NE+  K PVS KK+K A TP+KTD K          KKG K  N   +SPKS   +SC SC + F   N
Sbjct:  166 KKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEK----------KKGGKAAN---QSPKSASQVSCGSCKKTFNSGN 231

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig1351 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig1351 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig1351 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 8


Match Name	E-value	Identity	Description
HDT1_SOYBN	9.747e-30	72.15	Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE...	[more]
HDT2_MAIZE	1.476e-19	56.25	Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 ...	[more]
HDT1_SOLCH	1.442e-15	53.33	Histone deacetylase HDT1 OS=Solanum chacoense GN=H...	[more]
HDT1_MAIZE	8.981e-15	51.76	Histone deacetylase HDT1 OS=Zea mays GN=HDT1 PE=1 ...	[more]
HDT3_MAIZE	2.561e-14	51.81	Histone deacetylase HDT3 OS=Zea mays GN=HDT3 PE=2 ...	[more]
HDT2_ARATH	2.818e-14	59.21	Histone deacetylase HDT2 OS=Arabidopsis thaliana G...	[more]
HDT3_ARATH	9.478e-14	45.88	Histone deacetylase HDT3 OS=Arabidopsis thaliana G...	[more]
HDT1_ARATH	3.336e-7	45.57	Histone deacetylase HDT1 OS=Arabidopsis thaliana G...	[more]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TGQ0_SOYBN	1.498e-31	51.37	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TJ33_SOYBN	1.239e-30	72.62	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9SN80_RICCO	1.916e-20	60.49	Histone deacetylase 2a, putative OS=Ricinus commun...	[more]
D7SN59_VITVI	2.049e-20	63.22	Whole genome shotgun sequence of line PN40024, sca...	[more]
B4FHA8_MAIZE	1.287e-18	59.26	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
C5YUI2_SORBI	1.288e-18	58.33	Putative uncharacterized protein Sb09g026730 OS=So...	[more]
B9HQL3_POPTR	2.840e-18	60.00	Histone deacetylase OS=Populus trichocarpa GN=HDT9...	[more]
A9P9Y3_POPTR	3.692e-18	58.67	Putative uncharacterized protein OS=Populus tricho...	[more]
A9P950_POPTR	3.692e-18	58.67	Putative uncharacterized protein OS=Populus tricho...	[more]
A9P996_POPTR	1.056e-17	60.00	Putative uncharacterized protein OS=Populus tricho...	[more]

BLAST of Cicer_arietinum_v1_Contig1351 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G22650.2	1.151e-16	60.00	\| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 \| ...	[more]
AT5G22650.1	2.835e-15	59.21	\| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2, A...	[more]
AT5G03740.1	9.496e-15	45.88	\| Symbols: HD2C, HDT3 \| histone deacetylase 2C \| c...	[more]
AT3G44750.2	3.357e-8	45.57	\| Symbols: HDA3 \| histone deacetylase 3 \| chr3:162...	[more]
AT3G44750.1	3.357e-8	45.57	\| Symbols: HD2A, ATHD2A, HDA3, HDT1 \| histone deac...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 28..64 score
None	No IPR available	SEG	seg	seg	coord: 31..45 score
None	No IPR available	SEG	seg	seg	coord: 7..41 score
None	No IPR available	SEG	seg	seg	coord: 24..47 score
None	No IPR available	SEG	seg	seg	coord: 47..83 score: NAcoord: 95..106 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig1351 ID=Cicer_arietinum_v1_Contig1351; Name=Cicer_arietinum_v1_Contig1351; organism=Cicer arietinum; type=contig; length=696bp
GATTTCGAGCGGCCGCCCGGGCAGGTACCAGTTAAGAGCGGTGGACCTGC
AAAACAAGTAAAGGTTGTTGATCCAAAGAAAGACGAAGATTCTGATGAAG
ATGAGGAAATTGCAAGCTCTGATGAAGAGATGGATGATGCTGATAGCGAT
GATGATGAGGAGGATGACAGTGATGAAGATGCTGAGGAAGAGACTCCTGT
GAAGAAGGTGGACCAAGGAAAGAAGAGGCCCAACGAATCTGCTTCAAAAA
CTCCGGTTTCTAATAAGAAATCAAAAAATGCCACCCCTGAAAAGACTGAT
GGCAAGAAATCTGGACATGCTGCTACTCCTCACCCTAAGAAAGGTGCAAA
GACTCCCAACAGTGAATCTAAGTCTCCCAAGTCTGGAGGACATCTCTCTT
GCAAAAGCTGCAGCCAAGACTTTCAACTCCGAAACTGGACTCCTACAACA
CAGTAAGGCTAAGCATGGTGGTCAGTGAGATATTGCTGTGNTTTTGGTAA
TTTGGTAGCTATTTGTATCTTTTTCCTGAGTATGTTGAAGGGACAGTTTT
GGGAATTTGCTAAGAGGCCATTGGATTATTNGCTGTAACGTCTATGCTGG
AGTAAAATGGTTACTGGCNTTTTCTGGGATGGGNTTCTTGTATGGNAATG
GAANGTGAAGNATTGCTTTNGCCCTCATTNACCAAANAAAAACNGA

Search form

Cicer_arietinum_v1_Contig1351