Cicer_arietinum_v1_Contig1364
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Cicer_arietinum_v1_Contig1364 vs. TrEMBL
Match: C6SVF0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.958e-11 Identity = 42/66 (63.64%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 143 APKPATTNA--QPEGQTVXXXXXXXXXXXXX-IDPSKPAGINSNSIDGLNTGNFITDRPSTKVHAA 331 APKPAT NA QPE Q V IDP+K AGINS+S DG NTGNFITDRPSTKVHAA Sbjct: 25 APKPATNNAPAQPEVQAVNNVPPPKASPPTKTIDPNKAAGINSHSTDGQNTGNFITDRPSTKVHAA 90
BLAST of Cicer_arietinum_v1_Contig1364 vs. TrEMBL
Match: C6SVG4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.657e-10 Identity = 41/66 (62.12%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 143 APKPATTNA--QPEGQTVXXXXXXXXXXXXX-IDPSKPAGINSNSIDGLNTGNFITDRPSTKVHAA 331 A KPAT NA QPE Q V IDP+K AGINS+S DG NTGNFITDRPSTKVHAA Sbjct: 25 AAKPATNNAPAQPEVQAVNNAPPSKASPPTKTIDPNKAAGINSHSTDGRNTGNFITDRPSTKVHAA 90
BLAST of Cicer_arietinum_v1_Contig1364 vs. TrEMBL
Match: D7SIL0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008116001 PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.313e-7 Identity = 35/71 (49.30%), Postives = 40/71 (56.34%), Query Frame = 2 Query: 140 EAPKPATTNAQ-PEGQTVXXXXXXXXXXXXXIDPSKPAGINSNSI------DGLNTGNFITDRPSTKVHAA 331 EAPKPAT NA+ P+ Q I+ PAG+ N+ DG NTGNFITDRPSTKVHAA Sbjct: 51 EAPKPATNNAEAPQNQGQVGIAPPAGAPPAVINKQIPAGVQGNTTNNYFRADGQNTGNFITDRPSTKVHAA 121
BLAST of Cicer_arietinum_v1_Contig1364 vs. TrEMBL
Match: D7KWZ4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476049 PE=4 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 4.990e-7 Identity = 36/73 (49.32%), Postives = 42/73 (57.53%), Query Frame = 2 Query: 140 EAPKPATTNAQP-EGQTVXXXXXXXXXXXXXIDPSK--PAGINSNSI------DGLNTGNFITDRPSTKVHAA 331 EAPKP+T N P E Q+ +D K PAG+NSNS +G NTGNFITDRPSTKVH+A Sbjct: 22 EAPKPSTVNKAPAETQSSAPAPPLQTAAPKAVDSIKQVPAGLNSNSTNNYMRAEGQNTGNFITDRPSTKVHSA 94
BLAST of Cicer_arietinum_v1_Contig1364 vs. TrEMBL
Match: B9REC6_RICCO (SP1L, putative OS=Ricinus communis GN=RCOM_1620370 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 8.512e-7 Identity = 39/76 (51.32%), Postives = 42/76 (55.26%), Query Frame = 2 Query: 140 EAPKPATTNAQP---EGQTVXXXXXXXXXXXXX-IDPSK--PAGINSNSI------DGLNTGNFITDRPSTKVHAA 331 EAPKP NAQP + Q V +D SK PAGINS S DG NTGNF+TDRPSTKVHAA Sbjct: 22 EAPKPTRKNAQPAPNDAQVVNDLPPSKPAVASQPVDISKQVPAGINSTSTNNYMRADGQNTGNFLTDRPSTKVHAA 97
BLAST of Cicer_arietinum_v1_Contig1364 vs. TAIR peptide
Match: AT1G26355.1 (| Symbols: SP1L1 | SPIRAL1-like1 | chr1:9117950-9118611 REVERSE LENGTH=113) HSP 1 Score: 53.1434 bits (126), Expect = 1.217e-7 Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 2 Query: 140 EAPKPATTNAQ-PEGQT--VXXXXXXXXXXXXXIDPSK--PAGINSNSI------DGLNTGNFITDRPSTKVHAA 331 EAPKPA NA P +T + ++ +K PAGIN +S DG NTGNF+TDRPSTKVHAA Sbjct: 22 EAPKPAINNAPAPSSETLPISADPSPKHVAAQTVNVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAA 96
BLAST of Cicer_arietinum_v1_Contig1364 vs. TAIR peptide
Match: AT1G69230.2 (| Symbols: SP1L2 | SPIRAL1-like2 | chr1:26026543-26027085 REVERSE LENGTH=110) HSP 1 Score: 52.373 bits (124), Expect = 2.076e-7 Identity = 34/73 (46.58%), Postives = 40/73 (54.79%), Query Frame = 2 Query: 140 EAPKPATTNAQP-EGQTVXXXXXXXXXXXXXIDPSK--PAGINSNSI------DGLNTGNFITDRPSTKVHAA 331 EAPK A N P E ++ +D K PAG+NSNS +G NTGNFITDRPSTKVH+A Sbjct: 22 EAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSA 94
BLAST of Cicer_arietinum_v1_Contig1364 vs. TAIR peptide
Match: AT1G69230.1 (| Symbols: SP1L2 | SPIRAL1-like2 | chr1:26026543-26027085 REVERSE LENGTH=110) HSP 1 Score: 52.373 bits (124), Expect = 2.076e-7 Identity = 34/73 (46.58%), Postives = 40/73 (54.79%), Query Frame = 2 Query: 140 EAPKPATTNAQP-EGQTVXXXXXXXXXXXXXIDPSK--PAGINSNSI------DGLNTGNFITDRPSTKVHAA 331 EAPK A N P E ++ +D K PAG+NSNS +G NTGNFITDRPSTKVH+A Sbjct: 22 EAPKLAAVNKTPAETESSAHAPPTQAAAANAVDSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSA 94 The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1364 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 5
BLAST of Cicer_arietinum_v1_Contig1364 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig1364 ID=Cicer_arietinum_v1_Contig1364; Name=Cicer_arietinum_v1_Contig1364; organism=Cicer arietinum; type=contig; length=582bpback to top |