Cicer_arietinum_v1_Contig1366

Contig Overview
NameCicer_arietinum_v1_Contig1366
Unique NameCicer_arietinum_v1_Contig1366
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length967
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR421106ESTGR421106:1..697 +
GR394955ESTGR394955:1..697 +
HO664173ESTHO664173:260..787 +
GR406585ESTGR406585:624..967 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR421106GR421106Cicer arietinumEST
GR394955GR394955Cicer arietinumEST
HO664173HO664173Cicer arietinumEST
GR406585GR406585Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Match: B9SRZ0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0517320 PE=4 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 9.271e-49
Identity = 115/238 (48.32%), Postives = 140/238 (58.82%), Query Frame = 2
Query:   77 MPQLDFETLVSALSGVSTDRKIACEPTEES------EVHHH-------------PDSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNP--NSASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIGXXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIRSQRKKTGFFESVRAIFRSHRRGKSGSK 727
            MPQ+D ETLVSA +GVS D KIACE    +      E +H+             PD PPESFWLS DAE+DW+DRNA  ER +STKG+S STNLNP  N  SNSQRFS    KSK ++IGLPK QK+ F +A   RR+ +  N RLFPKRS S+  KSD  +IEPSSPKVSC+G                        G      R++  R QR  +GFF S RAIFR+ ++GK  S+
Sbjct:    1 MPQVDLETLVSACAGVSCDNKIACETLAATTTITIIESNHNNVNNDETDPPEIPPDFPPESFWLSKDAEHDWFDRNAFIERKDSTKGNSHSTNLNPNINPNSNSQRFSN--LKSKPSIIGLPKPQKSCFVDA---RRHCKPANTRLFPKRSGSV-SKSDSSLIEPSSPKVSCMGRVRSKKDRNRRLKNQQQSGRSNETGGK----RERPERKQR--SGFFASFRAIFRATKKGKDSSQ 226          

HSP 2 Score: 38.891 bits (89), Expect = 9.271e-49
Identity = 26/68 (38.24%), Postives = 38/68 (55.88%), Query Frame = 3
Query:  705 GEENRVQNTELPRDSS--STKKRSNGR-----KERGESTASRSESVYSEPAGLGSMNRFVSGRRSESW 887
            G+++  +  +  ++SS  +T K S+ R     +ERG S    +     EP GLG M RF SGR+SESW
Sbjct:  221 GKDSSQKGKDASQESSKKTTVKTSDIRDRLPMRERGASPIEPATGGI-EPVGLGGMKRFASGRKSESW 287          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Match: B9HC90_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1081246 PE=4 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.311e-47
Identity = 112/252 (44.44%), Postives = 141/252 (55.95%), Query Frame = 2
Query:   77 MPQLDFETLVSALSGVSTDRKIACE---------------PTEESEVHH-HPDSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNPN-----SASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIGXXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIRSQRKKTGFFESVRAIFRSHRRGKS---GSKHRTSTGFFVDE 760
            MPQ+D ETLVSA +G S DRK+ACE               P + S++    PD PPESFWLS DAE DW+  NA YER +STKG+S STNLNPN     + SNSQRFS     +KA++IGLPK+QK++F   K  RRN + GN RLFPKRS S G      ++EPSSPKVSC+G                         F +   ++ + R +++K  FF S +AIFRS    K     S + TS G  V E
Sbjct:    1 MPQVDLETLVSACAGGSCDRKVACETIAASSTTTTNHSQPPLDSSDLAEVPPDFPPESFWLSKDAELDWFSTNAYYERKDSTKGNSNSTNLNPNIIPNPNPSNSQRFSS--LHTKASIIGLPKTQKSTFVVDKKNRRNCKPGNTRLFPKRSGSTGKSDSTTMVEPSSPKVSCMG----RVRSKKDRNRRLRKQQQEQRSFQSIGKKESTKRDKKEKKSFFASFKAIFRSKSNNKDISLKSGNVTSHGGSVSE 246          

HSP 2 Score: 38.891 bits (89), Expect = 1.311e-47
Identity = 25/53 (47.17%), Postives = 29/53 (54.72%), Query Frame = 3
Query:  744 DSSSTKKRSN--GRKERGESTASRSESVYSEPA-GLGSMNRFVSGRRSESWGV 893
            +S + KK S+   R    +  A    SV  EP  GLG M RF SGRRSESW V
Sbjct:  246 ESYALKKSSDIRDRLPASDRDAPPRRSVGMEPVVGLGGMTRFASGRRSESWSV 298          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Match: A5ANN1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034223 PE=4 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 2.621e-45
Identity = 111/229 (48.47%), Postives = 135/229 (58.95%), Query Frame = 2
Query:   77 MPQLDFETLVSALSGVSTDRKIACEPTEESEVHHH--------PDSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNPN----SASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIG----XXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIRSQRKKTGFFESVRAIFRSHRRGK 715
            MPQ+D ETLVS   G   DRKIACE   + +V           PD PPESFWLS DAE DW+DRNA YER ESTKG+S STNLNPN    S S+SQRFS N+ KSKA++IGLPK QK  + +AK  RRN R  N RLF KR+    GKS   + EPSSPKVSC+G                           X   A ++R KS   + KK GF++++++IFR+  R K
Sbjct:    1 MPQVDLETLVSVCGGGGCDRKIACETLADGDVAPEGTXLPEVAPDFPPESFWLSKDAELDWFDRNAFYERKESTKGNSTSTNLNPNHNSHSNSSSQRFSLNL-KSKASIIGLPKPQKPCYTDAK-XRRNCRASNTRLFLKRTEPT-GKSAVPMAEPSSPKVSCMGRVRSKKDRSRRLRNRQRSIKSPAEMATXAAEAKMIRSKS--GKHKKGGFWKNLKSIFRTGGRAK 224          

HSP 2 Score: 34.2686 bits (77), Expect = 2.621e-45
Identity = 19/51 (37.25%), Postives = 25/51 (49.02%), Query Frame = 3
Query:  735 LPRDSSSTKKRSNGRKERGESTASRSESVYSEPAGLGSMNRFVSGRRSESW 887
            +P     +  R++      E   S  ES   EP  LG + RF SGRRS+SW
Sbjct:  229 VPEPPKQSSPRNSFTARAREMHTSEPES---EPPTLGGVQRFASGRRSDSW 276          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Match: B9IIU8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_576593 PE=4 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 8.581e-41
Identity = 108/247 (43.72%), Postives = 135/247 (54.66%), Query Frame = 2
Query:   77 MPQLDFETLVSALSGVSTDRKIACE-------------------PTEESEVHHHPDSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNPN-------SASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIGXXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIRSQRKKTGFFESVRAIFRSHRRGKSGSKHRTS 739
            MPQ+D ETLVSA +G + D KIACE                   P         PD PPESFWLS DAE DW++ NA YER +STKG+S S NLNPN       ++SNSQRFS     SKA++IGLPK QK++F      RR  + GN RLFPKRS S G     G+IEPSSPKVSC+G                         F ++  ++ S + ++K+ GFF S++AIFR     K  S HRT+
Sbjct:    1 MPQVDLETLVSACAGGTCDSKIACETLAATTTNTNNYRSQPPPPPDSPDVAEVPPDFPPESFWLSKDAELDWFNTNAYYERKDSTKGNSNSANLNPNLIPNPNHNSSNSQRFSS--FHSKASIIGLPKIQKSTFVVDTKKRRICKHGNTRLFPKRSGSTGKSDPTGMIEPSSPKVSCMG--RVRSKKDRRRLRKKQLQQQEQLSFQSSGKKESSRKDKKKEAGFFASLKAIFRCKSNIKDKS-HRTT 242          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Match: Q8LFB6_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.831e-30
Identity = 98/236 (41.53%), Postives = 122/236 (51.69%), Query Frame = 2
Query:   77 MPQLDFETLVSALS-GVSTDRKIACE---------PTEESEVHHHPDSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNPNSASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIGXXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIR----SQRKKTGFFESVRAIFRSHRRGKSGSKHRTST 742
            MPQ+D E  VS++  G S  RKI CE         P   +      D PPES++LSNDA+ +W   NA ++R +S KG+S   N NPNS  +SQRF   + KSKA++IGLPK QKT F EAK  +R H  G  R+  KR  S   K+D  ++EPSSPKVSCIG                          S  + RQKS R    ++ KK GF  S RAIFR     K  S   T T
Sbjct:    1 MPQVDLEAFVSSVCIGGSDHRKIVCETLADDSTIPPYYNNSAVSPSDFPPESYFLSNDAQLEWLSDNAFFDRKDSQKGNSGILNSNPNSNPSSQRF---LLKSKASIIGLPKPQKTCFNEAK--QRRH-AGKNRVILKRVGS-RIKTDISLLEPSSPKVSCIGRVRSRRER------------------SRRMHRQKSSRVEPVNRVKKPGFMASFRAIFRIKGGCKDVSARETHT 211          

HSP 2 Score: 28.1054 bits (61), Expect = 3.831e-30
Identity = 18/51 (35.29%), Postives = 24/51 (47.06%), Query Frame = 3
Query:  750 SSTKKRSNGRKERGESTASRSESVYSEPA--GLGSMNRFVSGRRSESWGVG 896
            +ST+   + R         +S     EP   GLG M RF SGRR++  G G
Sbjct:  211 TSTRNTHDIRSRLPAEAVEKSIFDGGEPVVPGLGGMTRFASGRRADLLGGG 261          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Match: Q9SJN3_ARATH (At2g36220/F2H17.17 OS=Arabidopsis thaliana GN=At2g36220 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.988e-30
Identity = 98/236 (41.53%), Postives = 122/236 (51.69%), Query Frame = 2
Query:   77 MPQLDFETLVSALS-GVSTDRKIACE---------PTEESEVHHHPDSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNPNSASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIGXXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIR----SQRKKTGFFESVRAIFRSHRRGKSGSKHRTST 742
            MPQ+D E  VS++  G S  RKI CE         P   +      D PPES++LSNDA+ +W   NA ++R +S KG+S   N NPNS  +SQRF   + KSKA++IGLPK QKT F EAK  +R H  G  R+  KR  S   K+D  ++EPSSPKVSCIG                          S  + RQKS R    ++ KK GF  S RAIFR     K  S   T T
Sbjct:    1 MPQVDIEAFVSSVCIGGSDHRKIVCETLADDSTIPPYYNNSAVSPSDFPPESYFLSNDAQLEWLSDNAFFDRKDSQKGNSGILNSNPNSNPSSQRF---LLKSKASIIGLPKPQKTCFNEAK--QRRH-AGKNRVILKRVGS-RIKTDISLLEPSSPKVSCIGRVRSRRER------------------SRRMHRQKSSRVEPVNRVKKPGFMASFRAIFRIKGGCKDVSARETHT 211          

HSP 2 Score: 27.7202 bits (60), Expect = 4.988e-30
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  837 GLGSMNRFVSGRRSESWGVG 896
            GLG M RF SGRR++  G G
Sbjct:  242 GLGGMTRFASGRRADLLGGG 261          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Match: D7LIP7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482594 PE=4 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.517e-28
Identity = 96/236 (40.68%), Postives = 121/236 (51.27%), Query Frame = 2
Query:   77 MPQLDFETLVSALS-GVSTDRKIACE---------PTEESEVHHHPDSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNPNSASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIGXXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIR----SQRKKTGFFESVRAIFRSHRRGKSGSKHRTST 742
            MPQ+D E  VS++  G S  RKIACE         P   +      D PPES++LS DA+ +W   NA ++R +S +G+S   N NPNS  +SQRF   + KSKA++IGLPK QKT F EAK  +R H  G  R+  KR  S   K+D   +EPSSP VSCIG                          S  + RQKS R    ++ KK+GF  S RAIFR     K  S   T T
Sbjct:    1 MPQVDLEAFVSSVCVGGSDHRKIACETLADDQTIPPYYNNSAVSPSDFPPESYFLSKDAQLEWLSDNAFFDRKDSQRGNSGILNSNPNSNPSSQRF---LLKSKASIIGLPKPQKTCFNEAK--QRRH-GGKNRVILKRVGS-RIKTDTSFLEPSSPIVSCIGRVKSRRER------------------SRRMHRQKSSRVEPANRVKKSGFMASFRAIFRIKGGCKDVSARETHT 211          

HSP 2 Score: 25.7942 bits (55), Expect = 7.517e-28
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  837 GLGSMNRFVSGRRSE 881
            GLG M RF SGRR++
Sbjct:  242 GLGGMTRFASGRRAD 256          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Match: D7LUA1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906647 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.245e-23
Identity = 90/229 (39.30%), Postives = 114/229 (49.78%), Query Frame = 2
Query:   77 MPQLDFETLVSALSGVSTDRKIACEPT--EESEVHHHP----------DSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNPNSASNSQRFSKNVK-KSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIGXXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIRSQR--------KKTGFFESVRAIFRS 700
            MPQ+     VS++    +DRKI+CE    +  +  H P          D PPES+ LS +A+ +W + NA +ER ES KG+S + N N N  SN    S+ +  KSKA++I LPK QKT F EAK  RRN R     + PKR  S   KSD  + EP SPKVSCIG                          S  + RQKS R+          KK GFF S RAIFR+
Sbjct:    1 MPQV-----VSSVCAGGSDRKISCETLADDNEDSTHDPKIRPVSISSVDFPPESYSLSKEAQLEWLNDNAFFERKESQKGNSSAPNSNSNPNSNPNLSSQRISLKSKASIIRLPKPQKTCFNEAK-KRRNCRIARTLMIPKRIGS-RLKSDPSLSEPCSPKVSCIGRVRSKRDR------------------SRRMQRQKSGRTDSFKDKPVRVKKPGFFASFRAIFRT 204          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Match: Q9LXJ3_ARATH (Putative uncharacterized protein At3g52710 OS=Arabidopsis thaliana GN=F3C22_110 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.230e-22
Identity = 91/228 (39.91%), Postives = 116/228 (50.88%), Query Frame = 2
Query:   77 MPQLDFETLVSALSGVSTDRKIACEP-TEESEVHHHP-----------DSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNPNSASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIGXXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIRSQR--------KKTGFFESVRAIFRS 700
            MPQ+    + SA +G S DRKI+CE   +++E   H            D PPES+ LS +A+ +W + NA +ER ES KG+S +   NPN+  NS     ++ KSKA++I LPK QKT F EAK  RRN R     + PKR  S   KSD  + EP SPKVSCIG                          S  + RQKS R+          KK GFF S RAIFR+
Sbjct:    1 MPQV----VASACTGGS-DRKISCETLADDNEDSPHNSKIRPVSISAVDFPPESYSLSKEAQLEWLNDNAFFERKESQKGNSSAPISNPNTNPNSSSHRISL-KSKASIIRLPKPQKTCFNEAK-KRRNCRIARTLMIPKRIGS-RLKSDPTLSEPCSPKVSCIGRVRSKRDR------------------SRRMQRQKSGRTNSFKDKPVPVKKPGFFASFRAIFRT 202          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Match: A2WX76_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04518 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 8.369e-12
Identity = 65/181 (35.91%), Postives = 85/181 (46.96%), Query Frame = 2
Query:   77 MPQLDFETLVSALSGVST-DRKIACE------------PTEESEVHHHPDSPPESFWLSNDAEYDWWDRNAIYERNESTKG-----SSISTNLNP---NSASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFP-KRSASIGG------KSDCGVIEPSSPKVSCIG 535
            MPQ+D E+LV  ++G    DRK++CE            P         PD PPES  +    E  + + N IY+R++STKG     S+   + NP    S SNS R +     +  T  GLP S + +F      RR   QG  R+ P KRS   GG      +   G  EP SPKVSCIG
Sbjct:    1 MPQVDLESLVCGVAGAGAGDRKVSCETVIAAGESGDASPPRMPPPPPDPDFPPESITIPIGDEVAFSELNPIYDRDDSTKGSTNPKSAAGASSNPIPAKSRSNSTRIA-GAPAAATTFFGLPASIRPAFT-----RRRPSQG--RILPDKRSGRRGGGGGGSSRRGDGEEEPRSPKVSCIG 173          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TAIR peptide
Match: AT2G36220.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52710.1); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:15192556-15193347 FORWARD LENGTH=263)

HSP 1 Score: 129.413 bits (324), Expect = 3.006e-32
Identity = 98/236 (41.53%), Postives = 122/236 (51.69%), Query Frame = 2
Query:   77 MPQLDFETLVSALS-GVSTDRKIACE---------PTEESEVHHHPDSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNPNSASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIGXXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIR----SQRKKTGFFESVRAIFRSHRRGKSGSKHRTST 742
            MPQ+D E  VS++  G S  RKI CE         P   +      D PPES++LSNDA+ +W   NA ++R +S KG+S   N NPNS  +SQRF   + KSKA++IGLPK QKT F EAK  +R H  G  R+  KR  S   K+D  ++EPSSPKVSCIG                          S  + RQKS R    ++ KK GF  S RAIFR     K  S   T T
Sbjct:    1 MPQVDIEAFVSSVCIGGSDHRKIVCETLADDSTIPPYYNNSAVSPSDFPPESYFLSNDAQLEWLSDNAFFDRKDSQKGNSGILNSNPNSNPSSQRF---LLKSKASIIGLPKPQKTCFNEAK--QRRH-AGKNRVILKRVGS-RIKTDISLLEPSSPKVSCIGRVRSRRER------------------SRRMHRQKSSRVEPVNRVKKPGFMASFRAIFRIKGGCKDVSARETHT 211          

HSP 2 Score: 27.7202 bits (60), Expect = 3.006e-32
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  837 GLGSMNRFVSGRRSESWGVG 896
            GLG M RF SGRR++  G G
Sbjct:  242 GLGGMTRFASGRRADLLGGG 261          
BLAST of Cicer_arietinum_v1_Contig1366 vs. TAIR peptide
Match: AT3G52710.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:19534638-19535507 FORWARD LENGTH=289)

HSP 1 Score: 109.383 bits (272), Expect = 3.166e-24
Identity = 91/228 (39.91%), Postives = 116/228 (50.88%), Query Frame = 2
Query:   77 MPQLDFETLVSALSGVSTDRKIACEP-TEESEVHHHP-----------DSPPESFWLSNDAEYDWWDRNAIYERNESTKGSSISTNLNPNSASNSQRFSKNVKKSKATMIGLPKSQKTSFAEAKCCRRNHRQGNARLFPKRSASIGGKSDCGVIEPSSPKVSCIGXXXXXXXXXXXXXXXXXXXXXXXXGFSAAVVRQKSIRSQR--------KKTGFFESVRAIFRS 700
            MPQ+    + SA +G S DRKI+CE   +++E   H            D PPES+ LS +A+ +W + NA +ER ES KG+S +   NPN+  NS     ++ KSKA++I LPK QKT F EAK  RRN R     + PKR  S   KSD  + EP SPKVSCIG                          S  + RQKS R+          KK GFF S RAIFR+
Sbjct:    1 MPQV----VASACTGGS-DRKISCETLADDNEDSPHNSKIRPVSISAVDFPPESYSLSKEAQLEWLNDNAFFERKESQKGNSSAPISNPNTNPNSSSHRISL-KSKASIIRLPKPQKTCFNEAK-KRRNCRIARTLMIPKRIGS-RLKSDPTLSEPCSPKVSCIGRVRSKRDR------------------SRRMQRQKSGRTNSFKDKPVPVKKPGFFASFRAIFRT 202          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1366 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SRZ0_RICCO9.271e-4948.32Putative uncharacterized protein OS=Ricinus commun... [more]
B9HC90_POPTR1.311e-4744.44Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5ANN1_VITVI2.621e-4548.47Putative uncharacterized protein OS=Vitis vinifera... [more]
B9IIU8_POPTR8.581e-4143.72Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q8LFB6_ARATH3.831e-3041.53Putative uncharacterized protein OS=Arabidopsis th... [more]
Q9SJN3_ARATH4.988e-3041.53At2g36220/F2H17.17 OS=Arabidopsis thaliana GN=At2g... [more]
D7LIP7_ARALY7.517e-2840.68Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7LUA1_ARALY1.245e-2339.30Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9LXJ3_ARATH5.230e-2239.91Putative uncharacterized protein At3g52710 OS=Arab... [more]
A2WX76_ORYSI8.369e-1235.91Putative uncharacterized protein OS=Oryza sativa s... [more]
back to top
BLAST of Cicer_arietinum_v1_Contig1366 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G36220.13.006e-3241.53| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT3G52710.13.166e-2439.91| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 8..25
score: NAcoord: 179..202
score
NoneNo IPR availableSEGsegsegcoord: 28..43
score
NoneNo IPR availableSEGsegsegcoord: 7..18
score
NoneNo IPR availableSEGsegsegcoord: 34..43
score
NoneNo IPR availableSEGsegsegcoord: 28..33
score
NoneNo IPR availableSEGsegsegcoord: 1..15
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1366 ID=Cicer_arietinum_v1_Contig1366; Name=Cicer_arietinum_v1_Contig1366; organism=Cicer arietinum; type=contig; length=967bp
GACCAAAAAAACATTCAATATTTCTAATTCATATTCTCTCTCTTATTCCA
ACTTAAGTTTTTCAACAACTACCACTATGCCACAGCTGGATTTTGAAACG
CTAGTTTCCGCGCTCTCCGGTGTTTCCACCGACCGGAAAATAGCATGCGA
ACCAACCGAAGAATCGGAGGTTCATCATCATCCCGACTCGCCGCCGGAAT
CATTTTGGCTCTCCAACGATGCAGAGTACGACTGGTGGGACAGAAACGCA
ATCTACGAACGAAACGAATCAACCAAAGGAAGCTCAATTTCCACAAACCT
AAACCCTAATTCAGCTTCCAATTCTCAACGATTCTCTAAGAACGTGAAAA
AGTCCAAAGCCACAATGATCGGTTTGCCAAAATCACAAAAAACTTCGTTT
GCTGAAGCAAAGTGCTGCCGCCGTAATCACCGGCAGGGAAACGCTAGGTT
GTTTCCGAAACGGAGTGCGTCAATCGGAGGAAAATCCGATTGCGGCGTGA
TCGAACCTTCGTCTCCGAAGGTTTCTTGCATAGGTAGAGTGAGATCGAAG
CGTGACCGGAATCGTAGGTTGAGAACTCGTCAGAGATCGATCTCCTCCAC
AACCTCCGGCTTCTCCGCCGCCGTCGTTAGACAAAAATCTATCCGTAGTC
AAAGAAAGAAAACCGGTTTCTTTGAAAGCGTTCGCGCGATTTTCCGAAGC
CACCGGAGAGGAAAATCGGGTTCAAAACACCGAACTTCCACGGGATTCTT
CGTCGACGAAGAAGAGGAGCAATGGGAGAAAAGAGCGGGGTGAAAGTACG
GCGAGTCGAAGCGAATCGGTTTACAGTGAACCGGCCGGTTTGGGTTCAAT
GAACCGGTTCGTGTCTGGGAGGCGGTCCGAGTCATGGGGAGTAGGTGAGT
CTGAAATCAAATAATGCCAATAGGATTTGTTTTCATGCCGTGTGAAACCA
GTTGATGACACGTGTGG
back to top