Cicer_arietinum_v1_Contig1369

Contig Overview
NameCicer_arietinum_v1_Contig1369
Unique NameCicer_arietinum_v1_Contig1369
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length581
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR397627ESTGR397627:8..242 +
GR393741ESTGR393741:39..380 +
GR420675ESTGR420675:1..581 +
GR405874ESTGR405874:1..579 -
GR405873ESTGR405873:1..581 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR397627GR397627Cicer arietinumEST
GR393741GR393741Cicer arietinumEST
GR420675GR420675Cicer arietinumEST
GR405874GR405874Cicer arietinumEST
GR405873GR405873Cicer arietinumEST


Homology
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BLAST of Cicer_arietinum_v1_Contig1369 vs. TrEMBL
Match: C6TF61_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.339e-11
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 2 
Query:  146 DSHVVLLRGKIFILCCNIRSFCMNRPMSTTSLAQCWDQLISPIIPLGFYTNLPTSQMFALAFHS 337
            D HV+ LR KI +L  NI SF +NRP+S+ SLA+CWDQ  SP+IPLG Y +L T+QM ALAFHS
Sbjct:   29 DYHVMFLRVKI-LLFGNIHSFDVNRPVSS-SLARCWDQF-SPVIPLGLYADLQTTQMLALAFHS 89
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1369 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
C6TF61_SOYBN3.339e-1162.50Putative uncharacterized protein OS=Glycine max PE... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 20..38
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1369 ID=Cicer_arietinum_v1_Contig1369; Name=Cicer_arietinum_v1_Contig1369; organism=Cicer arietinum; type=contig; length=581bp
GGCATATATAAAGAAAGGCTTTCTTGCTTAGTATCGACAGATTTTAATCC
TTCAGTTCCAAAATCCAATGGCAACCTCAATCGGTTGCATATATTACTAT
CTTTTGTTCCTTCTATGGTTTCTCTCTACTATCACTTTCTTTATAGACAG
TCACGTTGTGCTTCTACGTGGGAAAATATTCATATTGTGTTGCAACATTC
GTTCATTTTGTATGAATAGACCAATGTCTACTACATCACTGGCACAGTGT
TGGGATCAACTAATTAGTCCAATAATACCTCTTGGTTTTTATACAAACTT
ACCTACTTCTCAGATGTTTGCACTTGCTTTTCATTCTTAATTAGATAGTG
GTGGCATGTTCTTGTTAGAAACAAATATTGTTTTTCATCACGTTATGAAG
CACTCGTAGAAGATCTGTATTTGGATCTATGTATTTTTTTTAGTAGAGTG
TGTACTTTAATTCAGTTTTTAATTTTTTTATTCCTAGATAAATGGCATAC
CTATTGTAATAATAAATCAATAATAGTCGGATGTGTAAATGTTAAATCTC
AACCAAAAGATTGATGATTTTTTTTTCATAC
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