Cicer_arietinum_v1_Contig1379

Contig Overview
NameCicer_arietinum_v1_Contig1379
Unique NameCicer_arietinum_v1_Contig1379
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length433
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR420536ESTGR420536:1..433 +Cicer arietinum unigene v1n/a
GR405596ESTGR405596:1..433 -Cicer arietinum unigene v1n/a
GR405595ESTGR405595:1..433 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR420536GR420536Cicer arietinumEST
GR405596GR405596Cicer arietinumEST
GR405595GR405595Cicer arietinumEST


Homology
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BLAST of Cicer_arietinum_v1_Contig1379 vs. TrEMBL
Match: C7DK00_9APHY (Mitochondrial DNA (Fragment) OS=Polyporus grammocephalus PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.351e-7
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = -2 
Query:  142 LLIGWSDFTHHYFRSLG*FTFLSLLQCFGSGSNNIK 249
            L +G+SDFT HYFRSLG F FLSL++CF SGS++IK
Sbjct:   98 LFLGYSDFTRHYFRSLGSFPFLSLMKCFTSGSSDIK 133
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1379 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
C7DK00_9APHY9.351e-769.44Mitochondrial DNA (Fragment) OS=Polyporus grammoce... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1379 ID=Cicer_arietinum_v1_Contig1379; Name=Cicer_arietinum_v1_Contig1379; organism=Cicer arietinum; type=contig; length=433bp
ATCGGTGATGATATGGAATTAACACTCAAGCAATTTAAAGGGGCTATTAA
GGAAGACAAGCAAATTTATAAAAAAGGAGGTTAATCATACCAAAAGCCAC
ATATTAACAAATAAAAAAAATGTGGCGATCCTAAGGGAAACCTTAATATT
ATTACTTCCCGAACCAAAACATTGTAGTAGGGAAAGGAAAGTAAATCAAC
CGAGACTCCGAAAGTAATGGTGAGTGAAATCGGACCAGCCTATCAATAAT
TTAAAAACTGAAATTACTTTTGAACAAGATTTTATTTTCAATAAATGAGC
CACAGAAGGTGTTAGTCCTGTAGGGGTTTAAATTATTGTTTATCAAGTAC
GATGAGAGTTAACTTGTCGGAATAAAGGGGAACCATCCTCTAAGGGCTAA
GTATTATAAATTTAGCGATAGTGAACAGTACTG
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