Cicer_arietinum_v1_Contig1433

Contig Overview
NameCicer_arietinum_v1_Contig1433
Unique NameCicer_arietinum_v1_Contig1433
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length702
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR409534ESTGR409534:1..702 +Cicer arietinum unigene v1n/a
EH058969ESTEH058969:417..694 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR409534GR409534Cicer arietinumEST
EH058969EH058969Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig1433 vs. TrEMBL
Match: B3IX33_LOTJA (Transcription factor CCAAT OS=Lotus japonicus GN=CBF-A01 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.030e-24
Identity = 57/71 (80.28%), Postives = 62/71 (87.32%), Query Frame = 3
Query:    3 LNSSKETNGSSPNISGSEVTSLYSRGNFDGFAVNHLGSSV-HSLADMIDGGRGVIMPTKWVTAAGNCCNLK 212
            LNSSKETNGSSPNISGSEVTS+ S G  D FAVNHLGS++ HSLADMIDGG G+IMPTKWV AAG+C NLK
Sbjct:  261 LNSSKETNGSSPNISGSEVTSMCSLGGLDSFAVNHLGSAIHHSLADMIDGGHGIIMPTKWVGAAGSCFNLK 331          
BLAST of Cicer_arietinum_v1_Contig1433 vs. TrEMBL
Match: B3IX28_LOTJA (Transcription factor CCAAT OS=Lotus japonicus GN=CBF-A22 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.211e-22
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 3
Query:    3 LNSSKETNGSSPNISGSEVTSLYSRGNFDGFAVNHLGSSVHSLADMIDGGRGVIMPTKWVTAAGNCCNL 209
            LNSSKETNGS PN+SG EVTS+YSRG FD F+ NHLGSSV+ LADM+D GRG IMPTKWV A GN CNL
Sbjct:  259 LNSSKETNGSGPNVSGLEVTSMYSRGGFDTFSFNHLGSSVYPLADMVDCGRG-IMPTKWVAAGGNSCNL 326          
BLAST of Cicer_arietinum_v1_Contig1433 vs. TrEMBL
Match: A4ZVU9_MEDTR (CCAAT-binding transcription factor OS=Medicago truncatula GN=HAP2.1 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.585e-20
Identity = 46/64 (71.88%), Postives = 54/64 (84.38%), Query Frame = 3
Query:    3 LNSSKETNGSSPNISGSEVTSLYSRGNFDGFAVNHLGSSVHSLADMIDGGRGVIMPTKWVTAAG 194
            LNSSKETNG SPN+SGSEVTS+Y++G  D F VNH+GS+VHSL DMID G G++MPTKW  AAG
Sbjct:  264 LNSSKETNGGSPNVSGSEVTSMYTQGVLDSFTVNHIGSTVHSLGDMIDTGHGIVMPTKWFAAAG 327          
BLAST of Cicer_arietinum_v1_Contig1433 vs. TrEMBL
Match: C6T6I6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.813e-16
Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 3
Query:   66 LYSRGNFDGFAVNHLGSSVHSLADMIDGGRGVIMPTKWVTAAGNCCNLK 212
            +YSRG  D F++NHLGS+VHS ADMIDGGRG+I+PTKWV AAGNCCNLK
Sbjct:    1 MYSRGGLDSFSLNHLGSAVHSFADMIDGGRGMIIPTKWVAAAGNCCNLK 49          
BLAST of Cicer_arietinum_v1_Contig1433 vs. TrEMBL
Match: B9IIJ3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_576480 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.368e-16
Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 3
Query:    3 LNSSKETNGSSPNISGSEVTSLYSRGNFDGFAVNHLGSSVHSLADMIDGGRGVIMPTKWVTAAGNCCNLK 212
            LNSS E NG     SGSEVTS+Y+RG  D   +N LG + HS + M+D G G++MP+KWV AA NCCNLK
Sbjct:  204 LNSSMEANGGGSIFSGSEVTSMYNRGELDLLQINRLGPTFHSFSGMMDRGHGIVMPSKWVAAADNCCNLK 273          
BLAST of Cicer_arietinum_v1_Contig1433 vs. TrEMBL
Match: B9SDK4_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0420390 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.949e-15
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 3
Query:    6 NSSKETNGSSPNISGSEVTSLYSRGNFDGFAVNHLGSSVHSLADMIDGGRGVIMPTKWVTAAGNCCNLK 212
            + S  TNG   N+SGSEVTS+YS+ + D F++N LG  VHS + M+D G  ++MP+KWV AA +CCNLK
Sbjct:  245 SDSGGTNGGGSNLSGSEVTSMYSKRDLDHFSINLLGPPVHSFSVMMDNGHSIVMPSKWVAAAEDCCNLK 313          
BLAST of Cicer_arietinum_v1_Contig1433 vs. TrEMBL
Match: B9H9L4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_561162 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.345e-11
Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 3
Query:    9 SSKETNGSSPNISGSEVTSLYSRGNFDGFAVNHLGSSVHSLADMIDG-GRGVIMPTKWVTAAGNCCNLK 212
            +S E N    N+SGSEVTSLY+R +FD F  NH G +VH  + M  G G G+ MP+KW+ AA NC NLK
Sbjct:  213 NSMEANCGGSNLSGSEVTSLYNRVDFDRFPFNHHGPTVHGFSGMDGGHGIGIGMPSKWIAAADNCSNLK 281          
BLAST of Cicer_arietinum_v1_Contig1433 vs. TrEMBL
Match: A5PGU6_PETHY (YA1 (Fragment) OS=Petunia hybrida GN=nf-YA PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.996e-11
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 3
Query:    3 LNSSKETNGSSPNISGSEVTSLYSRGNFDGFAVNHLGSSVHSLADMIDGGRGVIMPTKWVTAAGNCCNLK 212
            L+S KET GS      SEVT++YSRGN D F   +L  SV ++ DM++ G G++M  KWV+AA +CCNLK
Sbjct:   90 LSSPKETTGSR-FCDSSEVTNMYSRGNLDPFPFQNLRPSVQAIPDMMNTGHGILMAGKWVSAADSCCNLK 158          
BLAST of Cicer_arietinum_v1_Contig1433 vs. TrEMBL
Match: A5BE86_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002606 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.538e-7
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 3
Query:    3 LNSSKETNGSSPNISGSEVTSLYSRGNFDGFAVNHLGSSVHSLADMIDGGRGVIMPT 173
            +NS KE NG+   + GSEVTS+YSR     F VN++ +SV +L DM+D G G++MP+
Sbjct:   28 MNSPKEANGNLSKLLGSEVTSMYSRRYLHQFPVNNVQASVDTLVDMMDRGHGIVMPS 84          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1433 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 9
Match NameE-valueIdentityDescription
B3IX33_LOTJA4.030e-2480.28Transcription factor CCAAT OS=Lotus japonicus GN=C... [more]
B3IX28_LOTJA2.211e-2276.81Transcription factor CCAAT OS=Lotus japonicus GN=C... [more]
A4ZVU9_MEDTR1.585e-2071.88CCAAT-binding transcription factor OS=Medicago tru... [more]
C6T6I6_SOYBN1.813e-1677.55Putative uncharacterized protein OS=Glycine max PE... [more]
B9IIJ3_POPTR2.368e-1657.14Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SDK4_RICCO9.949e-1553.62Transcription factor, putative OS=Ricinus communis... [more]
B9H9L4_POPTR1.345e-1153.62Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5PGU6_PETHY2.996e-1151.43YA1 (Fragment) OS=Petunia hybrida GN=nf-YA PE=2 SV... [more]
A5BE86_VITVI1.538e-749.12Putative uncharacterized protein OS=Vitis vinifera... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1433 ID=Cicer_arietinum_v1_Contig1433; Name=Cicer_arietinum_v1_Contig1433; organism=Cicer arietinum; type=contig; length=702bp
CTTTAAACTCTTCAAAAGAAACTAATGGTAGCAGTCCGAATATTTCCGGG
TCAGAGGTGACAAGCTTGTATTCAAGGGGAAATTTTGATGGCTTTGCGGT
CAATCACCTTGGATCTTCCGTCCACTCTCTGGCAGACATGATTGATGGTG
GGCGTGGCGTTATCATGCCCACCAAATGGGTTACAGCAGCTGGCAACTGC
TGTAACCTTAAAGCTTGATTCCAGAAAGAATCAAGTCAGGTTTGGTGCAA
TATTGCACCGAACCTTGTCCTTGATAAGACCAGATGATTATAGGATCGTC
CTGACATCTGGTCTTAAGGCAATCCATCCTTGGCTCAATCTTTGGCAAAT
CATCCTTGGCTCAATCTTTGGCAATGCATCCTTGGCTCAATGTACCTATG
GTAACTATCTTTGTCTTTCTGCACAGGACAATCTTGGTACGATTATCCCG
ATACAGAAGACATATGCACGAATATTTTACTAATCTTCAGTGTGGAAATA
AAGGCACTGAAATCTAATTCAAGTTATGTTATGCGTGTTTTGAGTAATGT
CTAAATGTGGTTTTTTATGATGTATTTCTGACTTTGGGGAGGAATGTATT
ATAGAACTTTGGTATGTGTATTTTGTTGGAAAAATAAATGTATTGGTGTG
GATTTCTCCAATATAGCAATGTCAAATTTTATCATCTTTTTTGCNNNNNN
NA
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