Cicer_arietinum_v1_Contig1437

Contig Overview
NameCicer_arietinum_v1_Contig1437
Unique NameCicer_arietinum_v1_Contig1437
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length793
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR917096ESTGR917096:56..395 +Cicer arietinum unigene v1n/a
GR915518ESTGR915518:56..371 +Cicer arietinum unigene v1n/a
GR916730ESTGR916730:56..395 +Cicer arietinum unigene v1n/a
GR916712ESTGR916712:56..395 +Cicer arietinum unigene v1n/a
GR917081ESTGR917081:56..394 +Cicer arietinum unigene v1n/a
GR409430ESTGR409430:1..706 +Cicer arietinum unigene v1n/a
GR406325ESTGR406325:213..793 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR917096GR917096Cicer arietinumEST
GR915518GR915518Cicer arietinumEST
GR916730GR916730Cicer arietinumEST
GR916712GR916712Cicer arietinumEST
GR917081GR917081Cicer arietinumEST
GR409430GR409430Cicer arietinumEST
GR406325GR406325Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Match: C6T522_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 7.027e-29
Identity = 64/93 (68.82%), Postives = 71/93 (76.34%), Query Frame = -2 
Query:  205 MADNKEIIPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGPPTKLSLTKGSEAPTQNM 483
            MA+ KE+IP  +D+D+KWDAC+DLTVRRFVYS+          FRSP TRWASIAFGAGVGIGSAY ECSRLFDGPPT L L K SE  TQ M
Sbjct:    1 MAEKKEMIPQQFDIDAKWDACIDLTVRRFVYSATAGAFGGLLFFRSPVTRWASIAFGAGVGIGSAYAECSRLFDGPPTNLPLPKVSETATQGM 93
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Match: D7U9C9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_41.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026083001 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.889e-24
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = -2 
Query:  199 MADNKEIIPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGPPTKLSLTKGSEAP-TQNMQD 483
            MA+NK+I PP YDLD+KWDACLDLTVRRFVYSS          FRSP TRWAS+AFGAG+G+GSAYTECS+ F G P      K S+AP +Q  QD
Sbjct:    1 MAENKQI-PPPYDLDAKWDACLDLTVRRFVYSSFAGAFGGLLLFRSPVTRWASVAFGAGLGLGSAYTECSQKFGGYPAMFLPPKISDAPASQEGQD 95
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Match: Q8LEM0_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.189e-22
Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = -2 
Query:  196 MADNKEIIPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGPPTKLSLTKGSEAPTQNMQDS 483
            MA+ K+ +PP YD+++KWDACLDLTVRRFVYSS          FRSP TRWASIA GAG+GIGSAY++CSR FD P    S +    AP  N+ ++
Sbjct:    1 MAEKKDSVPPEYDVNAKWDACLDLTVRRFVYSSLGGAFAGLLSFRSPVTRWASIALGAGIGIGSAYSDCSRAFDSPS---SSSANLAAPKNNITET 93
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Match: Q8GWC7_ARATH (Putative uncharacterized protein At1g72165/T9N14_2 OS=Arabidopsis thaliana GN=At1g72165/T9N14_2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.189e-22
Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = -2 
Query:  196 MADNKEIIPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGPPTKLSLTKGSEAPTQNMQDS 483
            MA+ K+ +PP YD+++KWDACLDLTVRRFVYSS          FRSP TRWASIA GAG+GIGSAY++CSR FD P    S +    AP  N+ ++
Sbjct:    1 MAEKKDSVPPEYDVNAKWDACLDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASIALGAGIGIGSAYSDCSRAFDSPS---SSSANLAAPKNNITET 93
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Match: D7KZA4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476349 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.162e-21
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = -2 
Query:  256 MADNKEIIPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGP 483
            MA+    +PP YD+++KWDACLDLTVRRFVYSS          FRSP TRWASIA GAG+GIGSAYT+CSR FD P
Sbjct:    1 MAEKNGSLPPEYDVNAKWDACLDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASIALGAGIGIGSAYTDCSRSFDAP 76
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Match: B8LNN7_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.199e-21
Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = -2 
Query:  193 IPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGPPTKLSLTKGSEAPTQNMQDSE 462
            +PP  +LD+KWDACLD+T+RRFVYSS          FRSP TRWA++AFGAGVG+GSAYT+CSR+FDG   K  L     +P  +    +
Sbjct:    7 VPPELELDAKWDACLDITLRRFVYSSVAGAGSALLLFRSPTTRWAAVAFGAGVGLGSAYTDCSRIFDGSLPKWPLPPNVSSPLSSSSSED 96
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Match: B8AN69_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14258 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.199e-21
Identity = 56/104 (53.85%), Postives = 67/104 (64.42%), Query Frame = -2 
Query:  169 KEIIPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGPPTKLSLTKGSEAPTQNMQ---DSE*MLHWILV 471
            K  IPP YDLD+KWDACLDL++RR  YS+          FRSP TRWAS+A GAGVGIG+AYTECS LF+G P K S  K S  P+ + +   D    L W+ V
Sbjct:  601 KSGIPPRYDLDAKWDACLDLSIRRVAYSTLGGTFAGLLLFRSPTTRWASVALGAGVGIGAAYTECSYLFNGAPPKWS-PKVSTVPSAHSELLLDLTIFLSWLYV 703
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Match: C5WT22_SORBI (Putative uncharacterized protein Sb01g001810 OS=Sorghum bicolor GN=Sb01g001810 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.201e-20
Identity = 53/93 (56.99%), Postives = 63/93 (67.74%), Query Frame = -2 
Query:  193 KEIIPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGPPTKLSLTKGSEAPTQNMQDSE 471
            K  IPP YDLD+KWDACLDL++RR  YSS          FRSP TRWAS+A GAGVGIG+AYTECS LF+G P K S  K S  P+ + +  +
Sbjct:   27 KSGIPPRYDLDAKWDACLDLSIRRVAYSSLAGAFAGLLLFRSPTTRWASVALGAGVGIGAAYTECSYLFNGAPPKWS-PKVSTIPSAHSEGGD 118
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Match: Q9C7T8_ARATH (Putative uncharacterized protein T9N14.2 OS=Arabidopsis thaliana GN=T9N14.2 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.049e-20
Identity = 52/96 (54.17%), Postives = 65/96 (67.71%), Query Frame = -2 
Query:  196 MADNKEIIPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGPPTKLSLTKGSEAPTQNMQDS 483
            MA+ K+ +PP YD+++KWDACLDLTVRRFVYSS            SP TRWASIA GAG+GIGSAY++CSR FD P    S +    AP  N+ ++
Sbjct:    1 MAEKKDSVPPEYDVNAKWDACLDLTVRRFVYSSLGGAFAG-----SPVTRWASIALGAGIGIGSAYSDCSRAFDSPS---SSSANLAAPKNNITET 88
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Match: Q6AVR1_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBa0075M12.11 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.495e-20
Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = -2 
Query:  193 KEIIPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGPPTKLSLTKGSEAPTQNMQDSE 471
            K  IPP YDLD+KWDACLD+++RR  YS+          FRSP TRWAS+A GAGVGIG+AYTECS LF+G P K S  K S  P+ + +  +
Sbjct:   34 KSGIPPRYDLDAKWDACLDISIRRVAYSTLGGTFAGLLLFRSPTTRWASVALGAGVGIGAAYTECSYLFNGAPPKWS-PKVSTVPSAHSEGED 125
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TAIR peptide
Match: AT1G72170.1 (| Symbols: | Domain of unknown function (DUF543) | chr1:27156403-27157516 FORWARD LENGTH=102)

HSP 1 Score: 110.153 bits (274), Expect = 1.408e-24
Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = -2 
Query:  196 MADNKEIIPPHYDLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFDGPPTKLSLTKGSEAPTQNMQDS 483
            MA+ K+ +PP YD+++KWDACLDLTVRRFVYSS          FRSP TRWASIA GAG+GIGSAY++CSR FD P    S +    AP  N+ ++
Sbjct:    1 MAEKKDSVPPEYDVNAKWDACLDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASIALGAGIGIGSAYSDCSRAFDSPS---SSSANLAAPKNNITET 93
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TAIR peptide
Match: AT1G22520.2 (| Symbols: | Domain of unknown function (DUF543) | chr1:7952996-7954304 REVERSE LENGTH=179)

HSP 1 Score: 93.9745 bits (232), Expect = 1.044e-19
Identity = 44/62 (70.97%), Postives = 50/62 (80.65%), Query Frame = -2 
Query:  262 DLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFD 447
            D+++KWDACLDLT RRFVYSS          FRSP TRWASIAFGAG+GIGSAYT+CSR+FD
Sbjct:   12 DVNAKWDACLDLTARRFVYSSLGGAFAGLLFFRSPVTRWASIAFGAGIGIGSAYTDCSRVFD 73
[Close]
BLAST of Cicer_arietinum_v1_Contig1437 vs. TAIR peptide
Match: AT1G22520.1 (| Symbols: | Domain of unknown function (DUF543) | chr1:7953299-7954304 REVERSE LENGTH=99)

HSP 1 Score: 93.9745 bits (232), Expect = 1.044e-19
Identity = 44/62 (70.97%), Postives = 50/62 (80.65%), Query Frame = -2 
Query:  262 DLDSKWDACLDLTVRRFVYSSXXXXXXXXXXFRSPQTRWASIAFGAGVGIGSAYTECSRLFD 447
            D+++KWDACLDLT RRFVYSS          FRSP TRWASIAFGAG+GIGSAYT+CSR+FD
Sbjct:   12 DVNAKWDACLDLTARRFVYSSLGGAFAGLLFFRSPVTRWASIAFGAGIGIGSAYTDCSRVFD 73
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1437 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T522_SOYBN7.027e-2968.82Putative uncharacterized protein OS=Glycine max PE... [more]
D7U9C9_VITVI8.889e-2463.54Whole genome shotgun sequence of line PN40024, sca... [more]
Q8LEM0_ARATH2.189e-2256.25Putative uncharacterized protein OS=Arabidopsis th... [more]
Q8GWC7_ARATH2.189e-2256.25Putative uncharacterized protein At1g72165/T9N14_2... [more]
D7KZA4_ARALY3.162e-2165.79Putative uncharacterized protein OS=Arabidopsis ly... [more]
B8LNN7_PICSI9.199e-2153.33Putative uncharacterized protein OS=Picea sitchens... [more]
B8AN69_ORYSI9.199e-2153.85Putative uncharacterized protein OS=Oryza sativa s... [more]
C5WT22_SORBI1.201e-2056.99Putative uncharacterized protein Sb01g001810 OS=So... [more]
Q9C7T8_ARATH2.049e-2054.17Putative uncharacterized protein T9N14.2 OS=Arabid... [more]
Q6AVR1_ORYSJ3.495e-2054.84Expressed protein OS=Oryza sativa subsp. japonica ... [more]
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BLAST of Cicer_arietinum_v1_Contig1437 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G72170.11.408e-2456.25| Symbols: | Domain of unknown function (DUF543) ... [more]
AT1G22520.21.044e-1970.97| Symbols: | Domain of unknown function (DUF543) ... [more]
AT1G22520.11.044e-1970.97| Symbols: | Domain of unknown function (DUF543) ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007512Protein of unknown function DUF543PANTHERPTHR21304UNCHARACTERIZEDcoord: 1..100
score: 1.6
IPR007512Protein of unknown function DUF543PFAMPF04418DUF543coord: 17..82
score: 2.4
NoneNo IPR availableSEGsegsegcoord: 42..52
score
NoneNo IPR availableSEGsegsegcoord: 18..29
score
NoneNo IPR availableSEGsegsegcoord: 3..16
score
NoneNo IPR availableSEGsegsegcoord: 14..32
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1437 ID=Cicer_arietinum_v1_Contig1437; Name=Cicer_arietinum_v1_Contig1437; organism=Cicer arietinum; type=contig; length=793bp
GAAAAAATCACCTGTTTTATTCAGGATTTCAGGAAAACAAAAGGATAACA
GCTTGGATTAGCGTGGTCGCGGCCGAGGTACTGTTAATTTATGATCATGC
AGTGCAACATTTTCAATAGCTATAACAGAGTAAAGGAACCACGACTATGT
TCTGTTTCACTATCCAGGAACTAGGATCCAATGTAGCATCTACTCGGAAT
CCTGCATATTCTGAGTAGGAGCCTCTGAGCCCTTAGTGAGTGATAGCTTG
GTTGGAGGTCCATCAAACAGACGGGAACATTCTGTGTATGCAGATCCTAT
TCCAACTCCAGCACCAAAAGCAATGGATGCCCAGCGAGTCTGAGGACTCC
TGAAAAAGAGGAGACCGCCAAATGCACCAGCAAATGAGGAGTATACAAAG
CGGCGGACAGTAAGATCAAGGCAGGCATCCCATTTGGAATCAAGGTCATA
GTGTGGAGGAATTATTTCTTTGTTGTCAGCCATCGGAAAGAGAATGGACC
GAGTTGATCACCAAATTAAATCACAATACTCTGTATATGTAAAACCCTAA
GATTCAAAAGAACTCGATTCTTGTGAATTTCTTATACCGATTTTGTATCT
CTCCTCTACTTGTCCGTCGCGGTCGTTCGATTTTGTCTTCTAGTGTCTTG
GACTTTGTTGCATGTATGAAAGAAATGAGGATTTTTAGAGGGAGACGAAA
TTGATAAAACGAGGAAGGCGAGATAAAGAAGGAGTGGGGGGAGAGAACGT
GAGAAGACGGGAAATGATGGAAGATAGAGCGAGGGAGCAAAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR007512Mic10