Cicer_arietinum_v1_Contig146

Contig Overview
NameCicer_arietinum_v1_Contig146
Unique NameCicer_arietinum_v1_Contig146
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length332
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR395613ESTGR395613:22..243 +Cicer arietinum unigene v1n/a
HO066088ESTHO066088:1..270 +Cicer arietinum unigene v1n/a
GR407035ESTGR407035:27..305 +Cicer arietinum unigene v1n/a
GR390825ESTGR390825:18..332 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR395613GR395613Cicer arietinumEST
HO066088HO066088Cicer arietinumEST
GR407035GR407035Cicer arietinumEST
GR390825GR390825Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Match: C6SYE5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.481e-15
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = -3
Query:  193 EKPKGPXEAXRXKIQPTQQQTRYRKSPYAPSGEEGGSIPFEDAASS 330
            EKPKGP EA R K+QPTQQQTRYRKSPYAPSGEEGGS+P EDA S+
Sbjct:   71 EKPKGPLEALRPKLQPTQQQTRYRKSPYAPSGEEGGSVPAEDAPSN 116          
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Match: B7FN21_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.481e-15
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = -3
Query:  193 KPKGPXEAXRXKIQPTQQQTRYRKSPYAPSGEEGGSIPFEDAASS 327
            KPKGP EA R K+QPTQQQTRYRKSPYAPSGEEGGS+P EDAAS+
Sbjct:   72 KPKGPLEALRPKLQPTQQQTRYRKSPYAPSGEEGGSVPSEDAASN 116          
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Match: D7TSV6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030913001 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.404e-12
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = -3
Query:  193 EKPKGPXEAXRXKIQPTQQQTRYRKSPYAPS-GEEGGSIPFEDAASS 330
            EKPKGP EA R K+QPTQQQTRYRKSPYAPS GE+GGS P ED A++
Sbjct:   69 EKPKGPLEALRPKLQPTQQQTRYRKSPYAPSDGEDGGSSPAEDMATN 115          
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Match: A9PB82_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_745745 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.752e-12
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = -3
Query:  193 EKPKGPXEAXRXKIQPTQQQTRYRKSPYAPS-GEEGGSIPFEDAASS 330
            EKPKGP EA R K+QPTQQQTRYRKSPYAP+ GE+GGS P EDA ++
Sbjct:   68 EKPKGPLEALRPKLQPTQQQTRYRKSPYAPADGEDGGSAPSEDATAN 114          
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Match: C6TC01_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.122e-10
Identity = 38/54 (70.37%), Postives = 40/54 (74.07%), Query Frame = -1
Query:  168 RSQRDXLRLFGXKYSQHSSKHGTGNLLTLLRAKKVEVFHLRMQLLPMSKQQSMF 329
            RS RD LRLFG  YSQ SSKH TGNLL LL+ KK EVF  RM  LP SKQQS+F
Sbjct:   71 RSLRDHLRLFGLNYSQRSSKHVTGNLLMLLQEKKGEVFQPRMH-LPTSKQQSVF 123          
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Match: A9PDR8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_584641 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.384e-10
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = -3
Query:  193 EKPKGPXEAXRXKIQPTQQQTRYRKSPYAPS-GEEGGSIPFEDAASS 330
            +KPKGP EA R K+QPTQQQTRYRKSPYAP+ GE+ GS   EDA ++
Sbjct:   67 DKPKGPLEALRPKLQPTQQQTRYRKSPYAPADGEDAGSASSEDATAN 113          
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Match: A5ATI8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013098 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.774e-9
Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = -3
Query:  226 EKPKGPXEAXRXKIQPTQQQTRYRKSPYAPSGEEG 330
            EKPKGP EA R K+QPTQQQTRYRKSPYAPS  EG
Sbjct:   72 EKPKGPLEALRPKLQPTQQQTRYRKSPYAPSDGEG 106          
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Match: Q9FMI6_ARATH (Genomic DNA, chromosome 5, P1 clone:MHJ24 OS=Arabidopsis thaliana PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.039e-8
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = -3
Query:  193 KPKGPXEAXRXKIQPTQQQTRYRKSPYAPS--GEEGGSIPFEDAASS 327
            KPKGP EA R K+QPTQQQTRYRKSP APS  GE+GG+   E  + +
Sbjct:   31 KPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGGAAQAEGGSGN 77          
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Match: Q93Z49_ARATH (AT5g64130/MHJ24_11 OS=Arabidopsis thaliana GN=At5g64130 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.039e-8
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = -3
Query:  193 KPKGPXEAXRXKIQPTQQQTRYRKSPYAPS--GEEGGSIPFEDAASS 327
            KPKGP EA R K+QPTQQQTRYRKSP APS  GE+GG+   E  + +
Sbjct:   69 KPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGGAAQAEGGSGN 115          
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Match: D7MQL4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496610 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.039e-8
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = -3
Query:  193 KPKGPXEAXRXKIQPTQQQTRYRKSPYAPS--GEEGGSIPFEDAASS 327
            KPKGP EA R K+QPTQQQTRYRKSP APS  GE+GG+   E  + +
Sbjct:   72 KPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGGAAQAEGGSGN 118          
BLAST of Cicer_arietinum_v1_Contig146 vs. TAIR peptide
Match: AT5G64130.3 (| Symbols: | cAMP-regulated phosphoprotein 19-related protein | chr5:25664547-25665339 REVERSE LENGTH=140)

HSP 1 Score: 60.8474 bits (146), Expect = 1.941e-10
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = -3
Query:  193 KPKGPXEAXRXKIQPTQQQTRYRKSPYAPS--GEEGGSIPFEDAASS 327
            KPKGP EA R K+QPTQQQTRYRKSP APS  GE+GG+   E  + +
Sbjct:   94 KPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGGAAQAEGGSGN 140          
BLAST of Cicer_arietinum_v1_Contig146 vs. TAIR peptide
Match: AT5G64130.1 (| Symbols: | cAMP-regulated phosphoprotein 19-related protein | chr5:25664547-25665339 REVERSE LENGTH=115)

HSP 1 Score: 60.8474 bits (146), Expect = 1.941e-10
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = -3
Query:  193 KPKGPXEAXRXKIQPTQQQTRYRKSPYAPS--GEEGGSIPFEDAASS 327
            KPKGP EA R K+QPTQQQTRYRKSP APS  GE+GG+   E  + +
Sbjct:   69 KPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGGAAQAEGGSGN 115          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig146 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SYE5_SOYBN9.481e-1582.61Putative uncharacterized protein OS=Glycine max PE... [more]
B7FN21_MEDTR9.481e-1584.44Putative uncharacterized protein OS=Medicago trunc... [more]
D7TSV6_VITVI4.404e-1276.60Whole genome shotgun sequence of line PN40024, sca... [more]
A9PB82_POPTR5.752e-1274.47Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6TC01_SOYBN4.122e-1070.37Putative uncharacterized protein OS=Glycine max PE... [more]
A9PDR8_POPTR5.384e-1068.09Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5ATI8_VITVI7.774e-982.86Putative uncharacterized protein OS=Vitis vinifera... [more]
Q9FMI6_ARATH5.039e-863.83Genomic DNA, chromosome 5, P1 clone:MHJ24 OS=Arabi... [more]
Q93Z49_ARATH5.039e-863.83AT5g64130/MHJ24_11 OS=Arabidopsis thaliana GN=At5g... [more]
D7MQL4_ARALY5.039e-863.83Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of Cicer_arietinum_v1_Contig146 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G64130.31.941e-1063.83| Symbols: | cAMP-regulated phosphoprotein 19-rel... [more]
AT5G64130.11.941e-1063.83| Symbols: | cAMP-regulated phosphoprotein 19-rel... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 51..60
score
NoneNo IPR availableSEGsegsegcoord: 31..41
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig146 ID=Cicer_arietinum_v1_Contig146; Name=Cicer_arietinum_v1_Contig146; organism=Cicer arietinum; type=contig; length=332bp
AGGGAAGAAGAGTAAAATCATAATCNCAAGAAGTGTCTACAGCATATAGC
TGCAGGTCAAATAATTTGTCTTGGGCTAACATGAATACATATAATAATAA
ACTTCTATTTTATTGTTGAAAACAACAAAAAGTTATTATCAAAACAATAA
TATTCAGCACATCATCAAAACATTGATTGCTGCTTACTCATTGGAAGAAG
CTGCATCCTCAAATGGAATACTTCCACCTTCTTCGCCCGAAGGAGCGTAA
GGAGATTTCCGGTACCGTGTTTGCTGCTGTGTTGGCTGTATTTTANGCCG
AANAGCCTCAANTGGTCCCTTTGGCTTCTCAC
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