Cicer_arietinum_v1_Contig147

Contig Overview
NameCicer_arietinum_v1_Contig147
Unique NameCicer_arietinum_v1_Contig147
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length445
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
HO065087ESTHO065087:54..408 +Cicer arietinum unigene v1n/a
HO065937ESTHO065937:54..408 +Cicer arietinum unigene v1n/a
HO066083ESTHO066083:1..448 +Cicer arietinum unigene v1n/a
HO065149ESTHO065149:53..429 +Cicer arietinum unigene v1n/a
HO064248ESTHO064248:53..429 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO065087HO065087Cicer arietinumEST
HO065937HO065937Cicer arietinumEST
HO066083HO066083Cicer arietinumEST
HO065149HO065149Cicer arietinumEST
HO064248HO064248Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig147 vs. TrEMBL
Match: O82042_PEA (Heat shock transcription factor (HSFA) (Fragment) OS=Pisum sativum GN=hsfA PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.208e-13
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 3 
Query:   42 ANASDDTVWEDLLNQELVAGNPDDEVVIGDLSQINVPXXXXXXXXXXXWTVDLQNLVDQMDFQP 233
            AN S+ + WE+LLNQ+LV GNP+DEV+IGD SQI+ P           WTVDLQNLVD+MDF+P
Sbjct:  210 ANESNLSDWEELLNQKLVGGNPEDEVLIGDFSQIDAP-VEDLVEKNDDWTVDLQNLVDEMDFEP 272
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig147 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
O82042_PEA5.208e-1359.38Heat shock transcription factor (HSFA) (Fragment) ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 51..61
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig147 ID=Cicer_arietinum_v1_Contig147; Name=Cicer_arietinum_v1_Contig147; organism=Cicer arietinum; type=contig; length=445bp
TAGCGTGGTCGCGGCCGAGGTACTCAACTTTGAGTTCAGTTGCAAATGCT
AGTGATGATACTGTGTGGGAGGATTTATTGAACCAAGAGTTGGTTGCTGG
AAATCCAGACGATGAAGTTGTGATCGGTGATTTGTCTCAAATTAATGTGC
CTTTGGAGGATTTGGAAGAAAAGAAGGATGATGATTGGACTGTGGATTTA
CAGAACCTTGTTGATCAAATGGATTTTCAACCTTAAGTCAAAATGGTTGT
AGAATTTTTCAACATCTTTTTTTGTTGTCATCATCAGTCTTCACTTGCAC
TTTGGCGCAAGGGAAGGTTGTTGTTGCAGAAGAAGCCAACAAATTGTGTA
TCCTTTTTGTTCAACAACAACATATGTTGTGTGAATAATTGAATTATTGT
TTATGCTGAATTAAGTTGTAGTACCTGCCCGGGCGGCCGCTCGAA
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