Cicer_arietinum_v1_Contig159

Contig Overview
NameCicer_arietinum_v1_Contig159
Unique NameCicer_arietinum_v1_Contig159
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length696
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
FE673396ESTFE673396:120..498 +Cicer arietinum unigene v1n/a
HO065853ESTHO065853:1..696 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FE673396FE673396Cicer arietinumEST
HO065853HO065853Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Match: C6SZP3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.001e-32
Identity = 72/108 (66.67%), Postives = 77/108 (71.30%), Query Frame = 3 
Query:  144 AWLQLQRVLKNGGVNSISTLPPXXXXXXXXXXXXXTPYVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR 467
            AWLQLQR++  GG N IS LP              +PYVVKVGIPEFL GIG GVESHV KL+SEIGDFQ LL TRT      GIPCKHRKLILKY HK+RLGLWRPR
Sbjct:    2 AWLQLQRIVTKGGANLISPLP-----LSRFFSKSSSPYVVKVGIPEFLNGIGKGVESHVPKLESEIGDFQKLLLTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPR 104
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Match: C6SXI0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.681e-30
Identity = 71/110 (64.55%), Postives = 77/110 (70.00%), Query Frame = 3 
Query:  144 AWLQLQRVLKN--GGVNSISTLPPXXXXXXXXXXXXXTPYVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR 467
            AWLQLQR++ N  GG N IS LP              +PYV+KVGIPEFL GIG GVESHV KL+SEIGDFQ LL  RT      GIPCKHRKLILKY HK+RLGLWRPR
Sbjct:    2 AWLQLQRIITNTKGGANLISPLP--------RFFSKCSPYVLKVGIPEFLNGIGKGVESHVPKLESEIGDFQKLLVIRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPR 103
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Match: D7UA47_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_60.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031257001 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.611e-27
Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = 3 
Query:  249 TPYVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR-EPIKA 482
            TPY+VKVGIPEFL GIG GVE+HVAKL++EIGDFQ LL TRT      GIPCKHRKLIL++ HK+RLGLWRPR EPIK+
Sbjct:   17 TPYIVKVGIPEFLNGIGKGVETHVAKLETEIGDFQKLLVTRTLRLKKLGIPCKHRKLILRHTHKYRLGLWRPRAEPIKS 95
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Match: A5AME9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026720 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.611e-27
Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = 3 
Query:  249 TPYVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR-EPIKA 482
            TPY+VKVGIPEFL GIG GVE+HVAKL++EIGDFQ LL TRT      GIPCKHRKLIL++ HK+RLGLWRPR EPIK+
Sbjct:   27 TPYIVKVGIPEFLNGIGKGVETHVAKLETEIGDFQKLLVTRTLRLKKLGIPCKHRKLILRHTHKYRLGLWRPRAEPIKS 105
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Match: A9PB74_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570703 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.628e-25
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 3 
Query:  255 YVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR-EPIKA 482
            Y+VKVGIPEFL GIG GVE+HVAKL+SEIGDF  LL TRT      GIPC+ RKLILKYAHK+RLGLWRPR EP+KA
Sbjct:   40 YIVKVGIPEFLNGIGKGVEAHVAKLESEIGDFHKLLVTRTLKLKKLGIPCQQRKLILKYAHKYRLGLWRPRAEPVKA 116
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Match: B9RFK7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1435520 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.778e-25
Identity = 55/72 (76.39%), Postives = 60/72 (83.33%), Query Frame = 3 
Query:  252 PYVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR 467
            PY+VKVGIPEFL GIG GVE+H AKL+SEIGDFQ LL TRT      GIPC+HRKLIL YAHKFR+GLWRPR
Sbjct:   34 PYIVKVGIPEFLNGIGKGVEAHAAKLESEIGDFQKLLITRTLKLKKIGIPCQHRKLILNYAHKFRVGLWRPR 105
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Match: B9N481_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_671549 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.738e-25
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 3 
Query:  249 TPYVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR-EPIKA 482
            +PY+VKVGIPEFL GIG GVE+HV KL+SEIGDF  LL TRT      GIPC+ RKLILKYAHK+R+GLWRPR +P+KA
Sbjct:   38 SPYLVKVGIPEFLNGIGKGVEAHVTKLESEIGDFHKLLVTRTLKLKKLGIPCQQRKLILKYAHKYRVGLWRPRAQPVKA 116
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Match: A9P9C2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.738e-25
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 3 
Query:  249 TPYVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR-EPIKA 482
            +PY+VKVGIPEFL GIG GVE+HV KL+SEIGDF  LL TRT      GIPC+ RKLILKYAHK+R+GLWRPR +P+KA
Sbjct:   38 SPYLVKVGIPEFLNGIGKGVEAHVTKLESEIGDFHKLLVTRTLKLKKLGIPCQQRKLILKYAHKYRVGLWRPRAQPVKA 116
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Match: B9S3H3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0734900 PE=4 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.188e-25
Identity = 59/102 (57.84%), Postives = 68/102 (66.67%), Query Frame = 3 
Query:  165 VLKNGG-VNSISTLPPXXXXXXXXXXXXXTPYVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR 467
            V+KN   V+S +   P              PY+ KVGIPEFLTGIG GVE+H AKL+SEIGDF  LL TRT      GIPC+HRKLIL YAHK+R+GLWRPR
Sbjct:    6 VVKNASKVSSFTPQQPNLIRGFSRFFSKTPPYIAKVGIPEFLTGIGKGVEAHAAKLESEIGDFHKLLVTRTLKLRKLGIPCQHRKLILNYAHKYRVGLWRPR 107
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Match: D7M5D4_ARALY (At5g26800 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_326904 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.841e-24
Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 3 
Query:  252 PYVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR-EPIKA 482
            PY VKVGIPEFL+GIG GVE+H+AKL++E+GD   LL TRT      GIPCKHRKLILKY+HK+RLGLW+PR + IKA
Sbjct:   35 PYPVKVGIPEFLSGIGGGVETHIAKLETELGDLPKLLVTRTLRLKKFGIPCKHRKLILKYSHKYRLGLWKPRADAIKA 112
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TAIR peptide
Match: AT5G26800.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:9425224-9426485 FORWARD LENGTH=112)

HSP 1 Score: 114.39 bits (285), Expect = 6.045e-26
Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 3 
Query:  252 PYVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR-EPIKA 482
            PY VKVGIPEFL+GIG GVE+H+AKL++E+GD   LL TRT      GIPCKHRKLILKY+HK+RLGLW+PR + IKA
Sbjct:   35 PYHVKVGIPEFLSGIGGGVETHIAKLETELGDLPKLLVTRTLRLKKFGIPCKHRKLILKYSHKYRLGLWKPRADAIKA 112
[Close]
BLAST of Cicer_arietinum_v1_Contig159 vs. TAIR peptide
Match: AT3G05810.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26800.1); Has 62 Blast hits to 62 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:1731259-1732321 REVERSE LENGTH=112)

HSP 1 Score: 106.686 bits (265), Expect = 1.260e-23
Identity = 51/77 (66.23%), Postives = 59/77 (76.62%), Query Frame = 3 
Query:  255 YVVKVGIPEFLTGIGNGVESHVAKLDSEIGDFQNLLETRTXXXXXXGIPCKHRKLILKYAHKFRLGLWRPR-EPIKA 482
            Y VKVGIPEFL GIG G E+H+AK+++EIGD   LL TRT      GIPCKHRKLILKY  K+RLGLW+PR + IKA
Sbjct:   36 YFVKVGIPEFLGGIGRGAETHIAKIETEIGDLHKLLVTRTLRLKKLGIPCKHRKLILKYGQKYRLGLWKPRADAIKA 112
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig159 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SZP3_SOYBN4.001e-3266.67Putative uncharacterized protein OS=Glycine max PE... [more]
C6SXI0_SOYBN1.681e-3064.55Putative uncharacterized protein OS=Glycine max PE... [more]
D7UA47_VITVI6.611e-2774.68Whole genome shotgun sequence of line PN40024, sca... [more]
A5AME9_VITVI6.611e-2774.68Putative uncharacterized protein OS=Vitis vinifera... [more]
A9PB74_POPTR1.628e-2575.32Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RFK7_RICCO2.778e-2576.39Putative uncharacterized protein OS=Ricinus commun... [more]
B9N481_POPTR4.738e-2570.89Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9P9C2_POPTR4.738e-2570.89Putative uncharacterized protein OS=Populus tricho... [more]
B9S3H3_RICCO6.188e-2557.84Putative uncharacterized protein OS=Ricinus commun... [more]
D7M5D4_ARALY6.841e-2469.23At5g26800 OS=Arabidopsis lyrata subsp. lyrata GN=A... [more]
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BLAST of Cicer_arietinum_v1_Contig159 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G26800.16.045e-2669.23| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
AT3G05810.11.260e-2366.23| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019083IGR protein motifPFAMPF09597IGRcoord: 53..111
score: 1.9
NoneNo IPR availableSEGsegsegcoord: 31..43
score: NAcoord: 86..91
score
NoneNo IPR availableSEGsegsegcoord: 60..72
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig159 ID=Cicer_arietinum_v1_Contig159; Name=Cicer_arietinum_v1_Contig159; organism=Cicer arietinum; type=contig; length=696bp
TTCGAGCGGCCGCCCGGGCAGGTACGCGGGGGAACGTCGTTTAGTTTAAC
GGCGGGGTTTTGAACTCCATATACCCTGGTTTAGCCTCCGGCGTCGAAAG
ACAAGCAATATTAGGGTGAAAGATCAAAATCAACATGGCCACGGCATGGT
TGCAGTTACAGAGAGTCCTCAAAAACGGAGGTGTTAATTCAATCTCCACA
CTCCCGCCTTCTTCGAATTACTTCTCTTCTAAATCCTTTTCCAAATCAAC
ACCCTACGTTGTCAAGGTTGGAATACCGGAGTTTTTAACCGGAATTGGAA
ATGGAGTTGAATCTCATGTTGCTAAGCTTGATTCCGAAATTGGTGACTTC
CAGAACCTTCTTGAAACTCGAACACTTAAACTCAAGAAGCTCGGTATTCC
TTGCAAACATAGGAAGCTAATATTGAAATATGCACACAAGTTTAGGCTGG
GATTATGGAGGCCGCGTGAGCCCATCAAAGCATGATTAGTTTCTATGTAG
TAAGTAGCCTTTTGTTGTGAAAAACCATATTGGAAATGTTTAGCCAGTGC
AGATAACAGTTCTTGACTTTACATGAAAAGAGGAAGTCATTGGCTCTGGA
TACCTCCGATCCTTTTTCATCACATTGACGTTTGTCATTTGCNCCAGTCA
AGTACAATGGACTTATTTTAGTTTGACTCTTTTTTATTGTCATTGC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR019083IGR_dom