Cicer_arietinum_v1_Contig1596

Contig Overview


Name	Cicer_arietinum_v1_Contig1596
Unique Name	Cicer_arietinum_v1_Contig1596
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	1076

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GR403733	EST	GR403733:123..708 +
GR408135	EST	GR408135:1..773 +
HO063123	EST	HO063123:196..874 -
GR420941	EST	GR420941:514..934 +
GR395539	EST	GR395539:635..936 -
GR401643	EST	GR401643:525..934 -
GR404905	EST	GR404905:637..934 -
GR402124	EST	GR402124:514..934 -
GR401642	EST	GR401642:514..934 +
GR396204	EST	GR396204:632..1076 +
HO214256	EST	HO214256:866..1066 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR403733	GR403733	Cicer arietinum	EST
GR408135	GR408135	Cicer arietinum	EST
HO063123	HO063123	Cicer arietinum	EST
GR420941	GR420941	Cicer arietinum	EST
GR395539	GR395539	Cicer arietinum	EST
GR401643	GR401643	Cicer arietinum	EST
GR404905	GR404905	Cicer arietinum	EST
GR402124	GR402124	Cicer arietinum	EST
GR401642	GR401642	Cicer arietinum	EST
GR396204	GR396204	Cicer arietinum	EST
HO214256	HO214256	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. SwissProt
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.579e-19
Identity = 73/196 (37.24%), Postives = 92/196 (46.94%), Query Frame = 1

Query:    1 SPSAMQMRQNMNHLRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMV 588
            S S MQ++    H   S  ++ PSSPVR+P  +GF+                  K RS SF     A+N                   SDW SP GKL+WG+  DEL+KLR+SASFG   N   + + P A     EPDVSWVNSLVK    EN+     ER+          D  +  LP W  EQMYI+ EQ +
Sbjct:  430 SASVMQLQSPSRH---SQMNHYPSSPVRQPPPHGFESSAAMAAAVMNARSSAFAK-RSLSFKPAPVASN------------------VSDWGSPNGKLEWGMQRDELNKLRRSASFGIHGNNNNSVSRP-ARDYSDEPDVSWVNSLVK----ENAPERVNERVGNTVNGAASRD--KFKLPSW-AEQMYIDHEQQI 595

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. SwissProt
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.084e-17
Identity = 51/94 (54.26%), Postives = 55/94 (58.51%), Query Frame = 1

Query:  166 QRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKD 447
            +RSQSFIDRG        +              SDW SP GKLDWGV GDEL KLRKSASF FR       A+   H+  AEPDVSWVNSLVKD
Sbjct:  494 KRSQSFIDRGGRAPAARSLMSPATTGAPSI--LSDWGSPDGKLDWGVQGDELHKLRKSASFAFRGQSAMPVAT---HAAAAEPDVSWVNSLVKD 582

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. SwissProt
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.117e-17
Identity = 68/195 (34.87%), Postives = 89/195 (45.64%), Query Frame = 1

Query:    7 SAMQMRQNMNHLRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMVA 591
            S +Q+R+++ + +  + +++ SSPV   S +  D                  KQRSQSFI+R    NHH  +              +DW S  GKLDW V GDEL KLRKS SF  R  G+ +   P   +G  EPDVSWV  LVK+ P E                         + P WM EQ Y+E EQ VA
Sbjct:  451 SGLQIRRSVINPQL-HSNSLSSSPVGANSLFSMDSSAVLASRAAEFA-----KQRSQSFIERNNGLNHHPAISSMTTTC------LNDWGSLDGKLDWSVQGDELQKLRKSTSFRLRAGGMESRL-PNEGTGLEEPDVSWVEPLVKE-PQET-----------------------RLAPVWM-EQSYMETEQTVA 607

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. SwissProt
Match: C3H47_ARATH (Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis thaliana GN=At3g55980 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.043e-16
Identity = 71/199 (35.68%), Postives = 89/199 (44.72%), Query Frame = 1

Query:    1 SPSA-MQMRQNMNHLRASYPSNMPSSPVRKP-SAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGA-ERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMV 588
            SPS   QM QNMN        + PSSPVR+P S +GF+                  K RS +F  R         +              SDW SP GKL+WG+ G+EL+K+R+S SFG   N      +  A     EPDVSWVNSLVKD    +   +G  ER+R               +  W  EQMY E+EQ V
Sbjct:  424 SPSRNSQMGQNMNQ-------HYPSSPVRQPPSQHGFESSAAAAVAVM--------KARSTAFAKRS--------LSFKPATQAAPQSNLSDWGSPNGKLEWGMKGEELNKMRRSVSFGIHGN----NNNNAARDYRDEPDVSWVNSLVKDSTVVSERSFGMNERVR---------------IMSW-AEQMYREKEQTV 579

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. SwissProt
Match: C3H24_ORYSJ (Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.086e-9
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 1

Query:  262 FSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSE 459
            +S W SP+G  DWGVNG+EL KLR+S+SF  R             SG  +PD+SWV++LVK+ P E
Sbjct:  651 WSKWGSPSGTPDWGVNGEELGKLRRSSSFELR-------------SGGDDPDLSWVHTLVKESPPE 703

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Match: B9SQM6_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0838120 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.581e-44
Identity = 103/197 (52.28%), Postives = 122/197 (61.93%), Query Frame = 1

Query:    1 SPSAMQMRQNMNHLRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMVA 591
            SP+ +++RQNMN  R+SYP+N+ SSPVRKP+AYGFD                  K RS SFIDRGAATN  +G+              SDW+SP GKLDWGV GDEL+KL+KSASFGFR++      +  A     EPDVSWVN+LVKDVP   S ++GAER              RE LPPWM EQMYIEQEQMVA
Sbjct:  159 SPTGLEIRQNMNQFRSSYPTNLSSSPVRKPAAYGFDSSAAVAAAMMNSRSSAFAK-RSHSFIDRGAATNR-LGITAAANSVSMMSANLSDWSSPDGKLDWGVQGDELNKLKKSASFGFRSSNNPTMRTNFALPNVDEPDVSWVNTLVKDVPPVGSSLFGAERQYSIGKGV------RESLPPWM-EQMYIEQEQMVA 346

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Match: A5BK99_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014472 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.488e-41
Identity = 101/200 (50.50%), Postives = 123/200 (61.50%), Query Frame = 1

Query:    1 SPSAMQMRQNMNHLRASYPSN--MPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLS-REMLPPWMVEQMYIEQEQMVA 591
            SP+ +QMRQNMN  RASYP+   + SSPVRK S+YGFD                  K RSQSFIDRG  ++   G               SDW+SP GKLDWG+ GDEL+KL+KSASFGFR N   ATA+ +  +   EPDVSWVNSLVKDVP+ +S ++G+++          Y +   E LPPW VEQMYIEQEQMVA
Sbjct:  486 SPTGLQMRQNMNQQRASYPTKTTVTSSPVRKTSSYGFDSSAAVAAAVMNSRSSAFAK-RSQSFIDRGGMSHRSPGFTAASNSATLMSSNLSDWSSPDGKLDWGIQGDELNKLKKSASFGFRTNN-TATATQSMMASTDEPDVSWVNSLVKDVPAVSSGLFGSQQ--------RPYGIGVHEKLPPW-VEQMYIEQEQMVA 674

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Match: B1Q4U6_9ROSI (Transcription factor OS=Bruguiera gymnorhiza PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.578e-40
Identity = 98/200 (49.00%), Postives = 123/200 (61.50%), Query Frame = 1

Query:    1 SPSAMQMRQNMNHLRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLS---REMLPPWMVEQMYIEQEQMVA 591
            S + +Q+RQNMN LR+SYPS++ SSPVRKP++YG D                  K RSQSFIDRGAAT+  +G+              SDW+SP GKLDWG+ GDEL+KL++S+SFG R+N    T +    S   EPDVSWVNSLVKDVPS     +GAE+          Y+LS   RE +P W  EQ+Y+EQEQMVA
Sbjct:  476 SSNGLQIRQNMNQLRSSYPSSLSSSPVRKPASYGVDSSAAVAAAVMNSRSSAFAK-RSQSFIDRGAATSR-LGLTAAANSVSLMSSNLSDWSSPHGKLDWGIQGDELNKLKRSSSFGIRSNSNPVTKTDFMQSNSNEPDVSWVNSLVKDVPSVPG--FGAEKQ---------YNLSKGVRESIPTW-TEQLYLEQEQMVA 661

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Match: B9HHQ6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_419958 PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.807e-37
Identity = 98/202 (48.51%), Postives = 113/202 (55.94%), Query Frame = 1

Query:    1 SPSAMQMRQNMNHLRASYPS-NMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFR--NNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLS---REMLPPWMVEQMYIEQEQMV 588
            SP+ MQ+RQNMN LR+SYP+ ++ SSP R P +YGFD                  K RSQSFID     +                    DW SP GKLDWG+ GDEL+KL+KSASFGFR  NN  A TA+    S   EPDVSWVNSLVKD P   S  +GAE+          Y L    RE LPPWM EQ+YIEQEQMV
Sbjct:  422 SPNGMQIRQNMNQLRSSYPAASLSSSPARNPISYGFDTSAAVAAAVMNSRSSAFAK-RSQSFIDPANTIS-------------MMPSNLPDWGSPNGKLDWGIQGDELNKLKKSASFGFRSNNNPAATTAANVTASHVGEPDVSWVNSLVKDAPPAGSTFFGAEKQ---------YSLGKGVRESLPPWM-EQIYIEQEQMV 599

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Match: B9SI36_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0612590 PE=4 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.981e-36
Identity = 93/198 (46.97%), Postives = 115/198 (58.08%), Query Frame = 1

Query:    1 SPSAMQMRQNMNH-LRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMVA 591
            SP+ +Q+RQN+N  LR+SYP+N  SSPVR PS++G D                  K RSQSF++R +A N H G              FSDW SP GKLDWG+ G+EL+KLRKSASFG RNNG A  A+ +  +    PDVSWV SLVKD PS +    G E  +           + E+ P W VEQ+YIEQEQMVA
Sbjct:  513 SPTGIQIRQNINQQLRSSYPTNFSSSPVR-PSSFGIDPSGAAAAAVLTSRSAAFAK-RSQSFVER-SAVNRHTGFSSPTSSATIMASNFSDWGSPDGKLDWGIQGEELNKLRKSASFGIRNNGGAGAAATSLPATLNAPDVSWVQSLVKDAPSTSPRQLGFEEQQQCHLNTG----NSEIFPAW-VEQLYIEQEQMVA 702

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Match: A5BAL2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006556 PE=4 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.735e-35
Identity = 92/199 (46.23%), Postives = 114/199 (57.29%), Query Frame = 1

Query:    1 SPSAMQMRQNMNH-LRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHA-EPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMVA 591
            SP+ +QMRQN+N  LR+SYP+++ SSPVR  +++G D                  K RSQSFI+R AA N H G               SDW SP GKLDWG+ G+EL+KLRKSASFGFR+NG +  A   +    A EPDVSWV SLVK+ PS     +G E                E+LPPW VEQ+ +EQEQMVA
Sbjct:  702 SPTGIQMRQNINQQLRSSYPASLSSSPVRGSASFGMDPSGSATAAVLNSRAAAFAK-RSQSFIERSAA-NRHSGFSSSASSAAVVPSPLSDWGSPDGKLDWGIQGEELNKLRKSASFGFRSNGSSYAAQAASVPAAADEPDVSWVQSLVKEAPSARPGQFGYEEQHQYHLNSG----GSEILPPW-VEQLCVEQEQMVA 893

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Match: B9HP30_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_768064 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.496e-33
Identity = 87/198 (43.94%), Postives = 115/198 (58.08%), Query Frame = 1

Query:    4 PSAMQMRQNMNH-LRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNG-VAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMVA 591
            P+ MQMRQN+N  LR+SYP++  SSPVR+  ++G D                  K RSQSF++R +A N H G               SDW SP GKLDWG+ G+EL+KLRKSASFGFR+NG  +ATA  +  +   EPDVSWV SLVKD P+++  +   E+ +             E LP W VEQ+Y+EQ+ +VA
Sbjct:  499 PTGMQMRQNINQQLRSSYPTSFSSSPVRRSPSFGVDHSGGAAAAALSSRSAAFAK-RSQSFVER-SAVNRHTGFSSPSSSANVMPSNLSDWGSPDGKLDWGIQGEELNKLRKSASFGFRSNGSSSATAGASVPATVDEPDVSWVQSLVKDTPAKSGPLGFEEQQQQCHLNIG----GSETLPAW-VEQLYMEQKPLVA 689

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Match: B9GIG9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_752023 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.329e-32
Identity = 88/199 (44.22%), Postives = 112/199 (56.28%), Query Frame = 1

Query:    1 SPSAMQMRQNMNH-LRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVA-ATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMVA 591
            SP+ +QMRQN+N  LR+SYP++  SSPVR   ++G D                  K RSQSF++R A   H +                SDW SP GKLDWG+ G+EL+KLRKSASFGFR++G + ATA+ +  +   EPDVSWV SLVKD P       G E+ +             EMLP W VEQ+YIEQE +VA
Sbjct:  536 SPTGLQMRQNINQQLRSSYPTSFSSSPVRTSPSFGMDHSGGAAAAVLSSRSAAFAK-RSQSFVERNAVNRHPV----FSSPAKVMPPNLSDWGSPDGKLDWGIQGEELNKLRKSASFGFRSDGSSFATAAASVPATVGEPDVSWVQSLVKDTPPVKPGPLGLEQQQQQQCHLNIG--GSEMLPAW-VEQLYIEQEPLVA 726

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Match: B9HSM9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833761 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.272e-31
Identity = 91/202 (45.05%), Postives = 108/202 (53.47%), Query Frame = 1

Query:    4 PSAMQMRQNMNHLRAS----YPS-NMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHA-EPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMVA 591
            PS M   Q ++ L+AS    YP+ N+ SSP R P++YGFD                    RS +F  R    N    M              SDWNSP GKLDWG+ GDEL+KL+KSASFGFR+N   AT + +  + H  EPDVSWVNSLVKDVP   S  +GAE+               E LPPWM EQMY EQEQMVA
Sbjct:  437 PSLMSPMQGVS-LKASTQTHYPAANLSSSPARNPTSYGFDTSAAVAAAVM--------NSRSSAFAKRSQTANSASMMSS----------NLSDWNSPNGKLDWGIQGDELNKLKKSASFGFRSNNNPATTAASLTASHVDEPDVSWVNSLVKDVPPAGSTFFGAEKQYSRREGVP------ESLPPWM-EQMYREQEQMVA 612

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Match: D7SJW8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024728001 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.626e-22
Identity = 73/197 (37.06%), Postives = 96/197 (48.73%), Query Frame = 1

Query:    4 PSAMQMRQNMNHLRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHA-EPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMVA 591
            P+ +   Q ++   A+   ++ SSPVR  +++G D                  K RSQ+ +                          SDW SP GKLDWG+ G+EL+KLRKSASFGFR+NG +  A   +    A EPDVSWV SLVK+ PS     +G E                E+LPPW VEQ+ +EQEQMVA
Sbjct:  584 PTILPQLQGLSMDAAAPQLHLSSSPVRGSASFGMDPSGSATAAVLNSRAAAFAK-RSQTVVPSP----------------------LSDWGSPDGKLDWGIQGEELNKLRKSASFGFRSNGSSYAAQAASVPAAADEPDVSWVQSLVKEAPSARPGQFGYEEQHQYHLNSG----GSEILPPW-VEQLCVEQEQMVA 752

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TAIR peptide
Match: AT2G40140.2 (| Symbols: CZF1, ZFAR1, SZF2, ATSZF2 | zinc finger (CCCH-type) family protein | chr2:16772537-16774330 FORWARD LENGTH=597)

HSP 1 Score: 96.6709 bits (239), Expect = 2.452e-20
Identity = 73/196 (37.24%), Postives = 92/196 (46.94%), Query Frame = 1

Query:    1 SPSAMQMRQNMNHLRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMV 588
            S S MQ++    H   S  ++ PSSPVR+P  +GF+                  K RS SF     A+N                   SDW SP GKL+WG+  DEL+KLR+SASFG   N   + + P A     EPDVSWVNSLVK    EN+     ER+          D  +  LP W  EQMYI+ EQ +
Sbjct:  430 SASVMQLQSPSRH---SQMNHYPSSPVRQPPPHGFESSAAMAAAVMNARSSAFAK-RSLSFKPAPVASN------------------VSDWGSPNGKLEWGMQRDELNKLRRSASFGIHGNNNNSVSRP-ARDYSDEPDVSWVNSLVK----ENAPERVNERVGNTVNGAASRD--KFKLPSW-AEQMYIDHEQQI 595

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TAIR peptide
Match: AT2G40140.1 (| Symbols: CZF1, ZFAR1, SZF2, ATSZF2 | zinc finger (CCCH-type) family protein | chr2:16772537-16774330 FORWARD LENGTH=597)

HSP 1 Score: 96.6709 bits (239), Expect = 2.452e-20
Identity = 73/196 (37.24%), Postives = 92/196 (46.94%), Query Frame = 1

Query:    1 SPSAMQMRQNMNHLRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMV 588
            S S MQ++    H   S  ++ PSSPVR+P  +GF+                  K RS SF     A+N                   SDW SP GKL+WG+  DEL+KLR+SASFG   N   + + P A     EPDVSWVNSLVK    EN+     ER+          D  +  LP W  EQMYI+ EQ +
Sbjct:  430 SASVMQLQSPSRH---SQMNHYPSSPVRQPPPHGFESSAAMAAAVMNARSSAFAK-RSLSFKPAPVASN------------------VSDWGSPNGKLEWGMQRDELNKLRRSASFGIHGNNNNSVSRP-ARDYSDEPDVSWVNSLVK----ENAPERVNERVGNTVNGAASRD--KFKLPSW-AEQMYIDHEQQI 595

[Close]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TAIR peptide
Match: AT5G58620.1 (| Symbols: | zinc finger (CCCH-type) family protein | chr5:23693959-23695782 FORWARD LENGTH=607)

HSP 1 Score: 89.3521 bits (220), Expect = 3.915e-18
Identity = 68/195 (34.87%), Postives = 89/195 (45.64%), Query Frame = 1

Query:    7 SAMQMRQNMNHLRASYPSNMPSSPVRKPSAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGAERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMVA 591
            S +Q+R+++ + +  + +++ SSPV   S +  D                  KQRSQSFI+R    NHH  +              +DW S  GKLDW V GDEL KLRKS SF  R  G+ +   P   +G  EPDVSWV  LVK+ P E                         + P WM EQ Y+E EQ VA
Sbjct:  451 SGLQIRRSVINPQL-HSNSLSSSPVGANSLFSMDSSAVLASRAAEFA-----KQRSQSFIERNNGLNHHPAISSMTTTC------LNDWGSLDGKLDWSVQGDELQKLRKSTSFRLRAGGMESRL-PNEGTGLEEPDVSWVEPLVKE-PQET-----------------------RLAPVWM-EQSYMETEQTVA 607

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BLAST of Cicer_arietinum_v1_Contig1596 vs. TAIR peptide
Match: AT3G55980.1 (| Symbols: SZF1, ATSZF1 | salt-inducible zinc finger 1 | chr3:20776857-20778599 FORWARD LENGTH=580)

HSP 1 Score: 87.0409 bits (214), Expect = 1.943e-17
Identity = 71/199 (35.68%), Postives = 89/199 (44.72%), Query Frame = 1

Query:    1 SPSA-MQMRQNMNHLRASYPSNMPSSPVRKP-SAYGFDXXXXXXXXXXXXXXXXXXKQRSQSFIDRGAATNHHIGMXXXXXXXXXXXXGFSDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSEMYGA-ERMRXXXXXXXXYDLSREMLPPWMVEQMYIEQEQMV 588
            SPS   QM QNMN        + PSSPVR+P S +GF+                  K RS +F  R         +              SDW SP GKL+WG+ G+EL+K+R+S SFG   N      +  A     EPDVSWVNSLVKD    +   +G  ER+R               +  W  EQMY E+EQ V
Sbjct:  424 SPSRNSQMGQNMNQ-------HYPSSPVRQPPSQHGFESSAAAAVAVM--------KARSTAFAKRS--------LSFKPATQAAPQSNLSDWGSPNGKLEWGMKGEELNKMRRSVSFGIHGN----NNNNAARDYRDEPDVSWVNSLVKDSTVVSERSFGMNERVR---------------IMSW-AEQMYREKEQTV 579

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BLAST of Cicer_arietinum_v1_Contig1596 vs. TAIR peptide
Match: AT2G41900.1 (| Symbols: | CCCH-type zinc finger protein with ARM repeat domain | chr2:17491352-17493502 FORWARD LENGTH=716)

HSP 1 Score: 51.9878 bits (123), Expect = 6.926e-7
Identity = 28/68 (41.18%), Postives = 35/68 (51.47%), Query Frame = 1

Query:  265 SDWNSPTGKLDWGVNGDELSKLRKSASFGFRNNGVAATASPTAHSGHAEPDVSWVNSLVKDVPSENSE 468
            S W S  G+ DWG++ + L KLR S+SF                    EPDVSWV SLVK+ P+E  E
Sbjct:  622 SKWGSSNGQPDWGMSSEALGKLRSSSSF-----------------DGDEPDVSWVQSLVKETPAEAKE 672

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig1596 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig1596 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig1596 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5


Match Name	E-value	Identity	Description
C3H29_ARATH	2.579e-19	37.24	Zinc finger CCCH domain-containing protein 29 OS=A...	[more]
C3H33_ORYSJ	1.084e-17	54.26	Zinc finger CCCH domain-containing protein 33 OS=O...	[more]
C3H66_ARATH	4.117e-17	34.87	Zinc finger CCCH domain-containing protein 66 OS=A...	[more]
C3H47_ARATH	2.043e-16	35.68	Zinc finger CCCH domain-containing protein 47 OS=A...	[more]
C3H24_ORYSJ	1.086e-9	48.48	Zinc finger CCCH domain-containing protein 24 OS=O...	[more]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9SQM6_RICCO	2.581e-44	52.28	Transcription factor, putative OS=Ricinus communis...	[more]
A5BK99_VITVI	3.488e-41	50.50	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B1Q4U6_9ROSI	6.578e-40	49.00	Transcription factor OS=Bruguiera gymnorhiza PE=2 ...	[more]
B9HHQ6_POPTR	6.807e-37	48.51	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9SI36_RICCO	1.981e-36	46.97	Transcription factor, putative OS=Ricinus communis...	[more]
A5BAL2_VITVI	3.735e-35	46.23	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9HP30_POPTR	3.496e-33	43.94	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GIG9_POPTR	1.329e-32	44.22	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9HSM9_POPTR	3.272e-31	45.05	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7SJW8_VITVI	3.626e-22	37.06	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of Cicer_arietinum_v1_Contig1596 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G40140.2	2.452e-20	37.24	\| Symbols: CZF1, ZFAR1, SZF2, ATSZF2 \| zinc finger...	[more]
AT2G40140.1	2.452e-20	37.24	\| Symbols: CZF1, ZFAR1, SZF2, ATSZF2 \| zinc finger...	[more]
AT5G58620.1	3.915e-18	34.87	\| Symbols: \| zinc finger (CCCH-type) family prote...	[more]
AT3G55980.1	1.943e-17	35.68	\| Symbols: SZF1, ATSZF1 \| salt-inducible zinc fing...	[more]
AT2G41900.1	6.926e-7	41.18	\| Symbols: \| CCCH-type zinc finger protein with A...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 37..54 score: NAcoord: 75..86 score: NAcoord: 165..172 score
None	No IPR available	SEG	seg	seg	coord: 42..48 score
None	No IPR available	SEG	seg	seg	coord: 37..45 score
None	No IPR available	SEG	seg	seg	coord: 37..52 score
None	No IPR available	SEG	seg	seg	coord: 13..25 score: NAcoord: 37..44 score
None	No IPR available	SEG	seg	seg	coord: 28..36 score
None	No IPR available	SEG	seg	seg	coord: 22..31 score: NAcoord: 45..52 score: NAcoord: 105..121 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig1596 ID=Cicer_arietinum_v1_Contig1596; Name=Cicer_arietinum_v1_Contig1596; organism=Cicer arietinum; type=contig; length=1076bp
TCTCCAAGTGCGATGCAGATGCGCCAAAACATGAACCACCTCCGTGCAAG
TTATCCATCCAACATGCCTTCCTCTCCAGTGAGGAAACCCTCAGCATACG
GGTTCGATTCATCAGCTGCTGTGGCAGCTGCAGTGATGAATTCCAGGTCA
GCTGCCTTCGCAAAGCAGCGCAGCCAAAGTTTCATCGACCGTGGCGCAGC
AACCAACCACCATATTGGGATGTCTTCGCCTTCCAACCCTTCTTGCAGGG
TGTCCTCAGGCTTTTCCGATTGGAATTCTCCCACGGGGAAACTCGATTGG
GGTGTAAATGGAGATGAGCTAAGCAAGCTGAGGAAATCTGCTTCTTTTGG
GTTCAGAAACAATGGAGTAGCAGCAACTGCATCCCCAACAGCACATTCAG
GACATGCTGAACCTGATGTCTCTTGGGTTAATTCATTGGTTAAGGATGTT
CCTTCTGAGAATTCTGAGATGTATGGCGCCGAGAGGATGCGACAGCAGCA
GCAGCAGCAGCAGCAATATGATCTGAGTAGAGAGATGCTTCCACCATGGA
TGGTGGAGCAGATGTATATAGAGCAAGAGCAGATGGTAGCATGAGTCAAA
TGCAGCCATGGCAAAACTTCTTGGTTATTCTGACAGTTTTTATTTATTTA
ATTATTTTATTTATTAATTTGAACTGTTACTACTATCCAACATTTACATA
TAGTATAATTAGGTCCAAAGAACAAAATTCATGTTAATCTTCCAGAGATT
TGAAGAGTTCCAACTTCTAGATCAGGAAAGACTTGGAAAAACATTGGATG
AAGCAACGGTGCTGAATTTTTTATTGTATTATATAATTTATTATTATTGC
CCCTTTTCTCTGGTGGGTCAATGTATTTTCTTTAGCAAGAGAACAAAGTA
TTTGTCATCGATTAAGCAGTAAACTTTTTTTAACACATATTGTTGTGCCT
CCAATATCAATGCCTATCCATTATTGTGAAAGTATTGTTGGTGTATCTAA
TTAATATTACTATTATTATTGTTTAATTGCAACCTTTGTGGTTATGATTA
GGTTATAACTAATCATTTTCTTCAGC

Search form

Cicer_arietinum_v1_Contig1596