Cicer_arietinum_v1_Contig1600

Contig Overview


Name	Cicer_arietinum_v1_Contig1600
Unique Name	Cicer_arietinum_v1_Contig1600
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	449

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GR408108	EST	GR408108:1..316 +
HO066244	EST	HO066244:4..393 +
HO065521	EST	HO065521:55..449 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR408108	GR408108	Cicer arietinum	EST
HO066244	HO066244	Cicer arietinum	EST
HO065521	HO065521	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. SwissProt
Match: HS101_ORYSJ (Heat shock protein 101 OS=Oryza sativa subsp. japonica GN=HSP101 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.117e-24
Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPK--SDAAQAVKRMK 436
            RW+EK+VVT+L +MLI+EEIDEN TVYIDA P   +L+YRV+  GG+VNAETG KSDILIQ+PNG    SDAAQAVK+M+
Sbjct:  822 RWIEKRVVTQLSKMLIQEEIDENCTVYIDAAPHKDELAYRVDNRGGLVNAETGQKSDILIQVPNGAATGSDAAQAVKKMR 901

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. SwissProt
Match: HS101_ARATH (Heat shock protein 101 OS=Arabidopsis thaliana GN=HSP101 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.366e-22
Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPK-SDAAQAVKRMK 436
            RW+EKKVVTEL +M++REEIDEN+TVYIDAG    DL YRVE +GG+V+A TG KSD+LI I NGPK SDAAQAVK+M+
Sbjct:  821 RWMEKKVVTELSKMVVREEIDENSTVYIDAG--AGDLVYRVE-SGGLVDASTGKKSDVLIHIANGPKRSDAAQAVKKMR 896

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Match: D7SI23_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007880001 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.494e-28
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPKSDAAQAVKRMK 436
            RWLEKKVVTEL +MLIREEIDEN+TVYIDAG  G  L+YRVE NGG+VNA TG KSD+LI+IPNGP+SDAAQAVK+MK
Sbjct:  791 RWLEKKVVTELSKMLIREEIDENSTVYIDAGVSGKGLAYRVENNGGLVNASTGQKSDVLIRIPNGPRSDAAQAVKKMK 868

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Match: A5BT43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012280 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.494e-28
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPKSDAAQAVKRMK 436
            RWLEKKVVTEL +MLIREEIDEN+TVYIDAG  G  L+YRVE NGG+VNA TG KSD+LI+IPNGP+SDAAQAVK+MK
Sbjct:  816 RWLEKKVVTELSKMLIREEIDENSTVYIDAGVSGKGLAYRVENNGGLVNASTGQKSDVLIRIPNGPRSDAAQAVKKMK 893

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Match: Q9ZT13_TOBAC (101 kDa heat shock protein OS=Nicotiana tabacum GN=HSP101 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.348e-28
Identity = 59/78 (75.64%), Postives = 71/78 (91.03%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPKSDAAQAVKRMK 436
            RWLE+KVVTEL +ML++EEIDEN+TVYIDAG  G DL+YRVE+NGG+VNA TG KSDILIQ+PNGP+SDA QAVK+M+
Sbjct:  821 RWLERKVVTELSKMLVKEEIDENSTVYIDAGVSGKDLTYRVEKNGGLVNAATGQKSDILIQLPNGPRSDAVQAVKKMR 898

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Match: Q39889_SOYBN (Heat shock protein OS=Glycine max GN=SB100 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.678e-28
Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNG--PKSDAAQAVKRMK 436
            RWLEKKVVTEL RML+REEIDEN+TVYIDAGP G +L YRVE+NGG+VN  TG KSDILIQIPNG  PK+DA QAVK+MK
Sbjct:  821 RWLEKKVVTELSRMLVREEIDENSTVYIDAGPNGGELVYRVEKNGGVVNPTTGQKSDILIQIPNGHAPKTDAVQAVKKMK 900

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Match: Q3L1D0_VITVI (Heat shock protein 101 OS=Vitis vinifera GN=hsp101 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.265e-27
Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPKSDAAQAVKRMK 436
            RWLEKKVVTEL +MLIREEIDEN+TVYIDAG  G  L+YRVE NGG+VNA TG KSD+LI+IPNG +SDAAQAVK+MK
Sbjct:  821 RWLEKKVVTELSKMLIREEIDENSTVYIDAGVSGKGLAYRVENNGGLVNASTGQKSDVLIRIPNGQRSDAAQAVKKMK 898

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Match: C7FB07_9ROSI (Heat shock protein OS=Vitis labrusca x Vitis vinifera PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.265e-27
Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPKSDAAQAVKRMK 436
            RWLEKKVVTEL +MLIREEIDEN+TVYIDAG  G  L+YRVE NGG+VNA TG KSD+LI+IPNG +SDAAQAVK+MK
Sbjct:  821 RWLEKKVVTELSKMLIREEIDENSTVYIDAGVSGKGLAYRVENNGGLVNASTGQKSDVLIRIPNGQRSDAAQAVKKMK 898

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Match: B9N063_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_742398 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.652e-27
Identity = 59/78 (75.64%), Postives = 68/78 (87.18%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPKSDAAQAVKRMK 436
            RWLE+KVVTEL RML+REEIDEN+TVYIDAGP G DL YRVE+NGG+VNA TG K+D+LIQIP  P+ DAAQ VK+MK
Sbjct:  822 RWLERKVVTELSRMLVREEIDENSTVYIDAGPDGQDLVYRVEKNGGLVNATTGQKTDVLIQIPKAPRDDAAQKVKKMK 899

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Match: B9RLP7_RICCO (Chaperone clpb, putative OS=Ricinus communis GN=RCOM_1469930 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.941e-26
Identity = 58/78 (74.36%), Postives = 68/78 (87.18%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPKSDAAQAVKRMK 436
            RWLEKKVVT+L RML+REEIDENTTVYIDA     DL YRVE+NGG+VNA TG K+++LIQIP+ PKSDAAQAVK+M+
Sbjct:  821 RWLEKKVVTQLSRMLLREEIDENTTVYIDAASNQDDLDYRVEKNGGLVNAATGRKAEVLIQIPSVPKSDAAQAVKKMR 898

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Match: D7KS08_ARALY (ATHSP101 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476565 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.108e-23
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPK-SDAAQAVKRMK 436
            RW+EKKVVTEL +M++REEIDEN+TVYIDAG  GSDL YRVE +GG+V+A TG KSD+LI I NGPK SDAAQAVK+M+
Sbjct:  821 RWMEKKVVTELSKMVVREEIDENSTVYIDAGAGGSDLVYRVE-SGGLVDASTGKKSDVLIHIANGPKRSDAAQAVKKMR 898

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Match: C5Z1B4_SORBI (Putative uncharacterized protein Sb09g025900 OS=Sorghum bicolor GN=Sb09g025900 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.108e-23
Identity = 54/79 (68.35%), Postives = 70/79 (88.61%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPN-GPKSDAAQAVKRMK 436
            RW+EK+VVT+L +MLI+EEIDEN TVYIDA P   +L+YRV+++GG+VNAETG+KSDILIQ+PN   +SDAAQAVK+M+
Sbjct:  822 RWIEKRVVTQLSKMLIQEEIDENCTVYIDAAPAKDELAYRVDRSGGLVNAETGLKSDILIQVPNDAVRSDAAQAVKKMR 900

[Close]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TAIR peptide
Match: AT1G74310.1 (| Symbols: ATHSP101, HSP101, HOT1 | heat shock protein 101 | chr1:27936715-27939862 REVERSE LENGTH=911)

HSP 1 Score: 105.145 bits (261), Expect = 1.618e-23
Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = -2

Query:  203 RWLEKKVVTELXRMLIREEIDENTTVYIDAGPKGSDLSYRVEQNGGIVNAETGVKSDILIQIPNGPK-SDAAQAVKRMK 436
            RW+EKKVVTEL +M++REEIDEN+TVYIDAG    DL YRVE +GG+V+A TG KSD+LI I NGPK SDAAQAVK+M+
Sbjct:  821 RWMEKKVVTELSKMVVREEIDENSTVYIDAG--AGDLVYRVE-SGGLVDASTGKKSDVLIHIANGPKRSDAAQAVKKMR 896

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig1600 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig1600 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig1600 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
HS101_ORYSJ	1.117e-24	68.75	Heat shock protein 101 OS=Oryza sativa subsp. japo...	[more]
HS101_ARATH	1.366e-22	70.89	Heat shock protein 101 OS=Arabidopsis thaliana GN=...	[more]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7SI23_VITVI	1.494e-28	79.49	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BT43_VITVI	1.494e-28	79.49	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q9ZT13_TOBAC	4.348e-28	75.64	101 kDa heat shock protein OS=Nicotiana tabacum GN...	[more]
Q39889_SOYBN	5.678e-28	78.75	Heat shock protein OS=Glycine max GN=SB100 PE=2 SV...	[more]
Q3L1D0_VITVI	1.265e-27	78.21	Heat shock protein 101 OS=Vitis vinifera GN=hsp101...	[more]
C7FB07_9ROSI	1.265e-27	78.21	Heat shock protein OS=Vitis labrusca x Vitis vinif...	[more]
B9N063_POPTR	1.652e-27	75.64	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RLP7_RICCO	6.941e-26	74.36	Chaperone clpb, putative OS=Ricinus communis GN=RC...	[more]
D7KS08_ARALY	1.108e-23	73.42	ATHSP101 OS=Arabidopsis lyrata subsp. lyrata GN=AR...	[more]
C5Z1B4_SORBI	1.108e-23	68.35	Putative uncharacterized protein Sb09g025900 OS=So...	[more]

BLAST of Cicer_arietinum_v1_Contig1600 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G74310.1	1.618e-23	70.89	\| Symbols: ATHSP101, HSP101, HOT1 \| heat shock pro...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 19..35 score: NAcoord: 49..59 score
None	No IPR available	SEG	seg	seg	coord: 83..93 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig1600 ID=Cicer_arietinum_v1_Contig1600; Name=Cicer_arietinum_v1_Contig1600; organism=Cicer arietinum; type=contig; length=449bp
ACAACAAAAACTAAATTTACTGATGAACAAAAGGCAACTATTACAAAGGA
CTTTCATCCATCAGTCACACTCATTTCATATCAACAAAACTAAAGTTCAA
AAAGAACACAAACTTAAACACTAGTAACAATATCCACACAAAAACTTCAT
CATTGCACAATGAATTTTACTCTTCCATTTCATCCTCGTCAATTTCCTCA
ATCTTCATTCTCTTGACAGCTTGAGCAGCATCACTTTTAGGTCCATTTGG
TATTTGAATCAAAATATCTGACTTCACTCCAGTTTCAGCATTAACAATTC
CTCCATTCTGTTCTACACGGTATGACAAGTCACTCCCCTTAGGACCAGCA
TCAATGTAAACCGTTGTATTCTCGTCAATTTCTTCCCTTATAAGCATCCT
ANAGAGTTCCGTCACCACCTTCTTCTCAAGCCACCTCCCCCGCGTACCT

Search form

Cicer_arietinum_v1_Contig1600