Cicer_arietinum_v1_Contig1601

Contig Overview


Name	Cicer_arietinum_v1_Contig1601
Unique Name	Cicer_arietinum_v1_Contig1601
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	829

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GR916982	EST	GR916982:13..473 +
GR393857	EST	GR393857:1..546 +
GR402701	EST	GR402701:235..552 +
GR404705	EST	GR404705:235..577 +
GR408099	EST	GR408099:1..674 +
GR393058	EST	GR393058:315..766 -
GR402218	EST	GR402218:235..748 +
GR403938	EST	GR403938:642..748 -
GR401869	EST	GR401869:311..748 -
GR392764	EST	GR392764:315..755 -
GR401870	EST	GR401870:235..748 +
GR420540	EST	GR420540:103..761 +
GR405604	EST	GR405604:104..761 +
GR405605	EST	GR405605:45..764 -
GR410122	EST	GR410122:22..830 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR916982	GR916982	Cicer arietinum	EST
GR393857	GR393857	Cicer arietinum	EST
GR402701	GR402701	Cicer arietinum	EST
GR404705	GR404705	Cicer arietinum	EST
GR408099	GR408099	Cicer arietinum	EST
GR393058	GR393058	Cicer arietinum	EST
GR402218	GR402218	Cicer arietinum	EST
GR403938	GR403938	Cicer arietinum	EST
GR401869	GR401869	Cicer arietinum	EST
GR392764	GR392764	Cicer arietinum	EST
GR401870	GR401870	Cicer arietinum	EST
GR420540	GR420540	Cicer arietinum	EST
GR405604	GR405604	Cicer arietinum	EST
GR405605	GR405605	Cicer arietinum	EST
GR410122	GR410122	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 9.796e-47
Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MIISE NRKEICKYLF+EGVC+AKKDFNLAKHP IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYWFLTN+GIEFLRTYLNLPS++VPATLKK AK
Sbjct:    1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.350e-46
Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MIISE NR+EICKYLF+EGVC+AKKDFNL KHP IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYWFLTN+GIEFLRTYLNLPS++VPATLKK AK
Sbjct:    1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Match: RS10_ORYSJ (40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=RPS10 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.031e-43
Identity = 81/96 (84.38%), Postives = 89/96 (92.71%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MII +KNR EICKYLFQEGV YAKKD+NLAKHP+IDVPNLQVIKLMQSFKS+EYVRETF+W +YYW+LTNDGIE LR YLNLPSEIVPATLKK A+
Sbjct:    1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSAR 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Match: RS102_ARATH (40S ribosomal protein S10-2 OS=Arabidopsis thaliana GN=RPS10B PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.761e-41
Identity = 82/97 (84.54%), Postives = 90/97 (92.78%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEID-VPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MIISE NR+EI KYLF+EGV +AKKDFNL +HP I+ VPNLQVIKLMQSFKS+EYVRETFAWMHYYWFLTN+GI+FLRTYLNLPSEIVPATLKKQ K
Sbjct:    1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQK 97

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Match: RS10_LUMRU (40S ribosomal protein S10 OS=Lumbricus rubellus GN=RPS10 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.863e-30
Identity = 61/96 (63.54%), Postives = 77/96 (80.21%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            M++S+KNR  I +YLF+EGV  AKKDF+L KH EIDVPNL VI+ MQS  SR YV+E F W HYYW+L N+GI++LR +L+LP EIVPATLK+Q +
Sbjct:    1 MLMSKKNRVMIYEYLFKEGVLVAKKDFHLPKHGEIDVPNLHVIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTR 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Match: RS10_SPOFR (40S ribosomal protein S10 OS=Spodoptera frugiperda GN=RpS10 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.135e-29
Identity = 58/97 (59.79%), Postives = 79/97 (81.44%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEID-VPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            M++ ++NR  I +YLF+EGV  AKKD++  KHP+++ +PNLQVIK MQS KSR YV+E FAW H+YW+LTN+GIE+LR +L+LP EIVPATLK+  +
Sbjct:    1 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 97

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Match: RS10_ICTPU (40S ribosomal protein S10 OS=Ictalurus punctatus GN=rps10 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.269e-27
Identity = 58/99 (58.59%), Postives = 78/99 (78.79%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            M++ +KNR  I + LF+EGV  AKKD +LAKHPE+   +VPNL V+K MQS KS  YV+E FAW H+YW+LTN+GI++LR +L+LP EIVPATL++Q +
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVHLAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTR 99

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Match: RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.870e-27
Identity = 57/96 (59.38%), Postives = 76/96 (79.17%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKK 347
            M++ +KNR  I + LF+EGV  AKKD ++ KHPE+   +VPNL V+K MQS KSR YV+E FAW H+YW+LTN+GI++LR YL+LP EIVPATL++
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRR 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Match: RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.870e-27
Identity = 57/96 (59.38%), Postives = 76/96 (79.17%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKK 347
            M++ +KNR  I + LF+EGV  AKKD ++ KHPE+   +VPNL V+K MQS KSR YV+E FAW H+YW+LTN+GI++LR YL+LP EIVPATL++
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRR 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Match: RS10_HUMAN (40S ribosomal protein S10 OS=Homo sapiens GN=RPS10 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.870e-27
Identity = 57/96 (59.38%), Postives = 76/96 (79.17%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKK 347
            M++ +KNR  I + LF+EGV  AKKD ++ KHPE+   +VPNL V+K MQS KSR YV+E FAW H+YW+LTN+GI++LR YL+LP EIVPATL++
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRR 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Match: B7FGT6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 3.839e-49
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWM+YYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK
Sbjct:    1 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Match: C6T1S1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.488e-48
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MII EKNRKEICKYLFQEGVC+AKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSE VPATLKKQAK
Sbjct:    1 MIIPEKNRKEICKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSETVPATLKKQAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Match: C6SY19_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 3.250e-48
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MII EKNRKEICKYLFQEGVC+AKKDFNLAKHPEIDVPNLQVIKL QSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK
Sbjct:    1 MIIPEKNRKEICKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLTQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Match: A9PHC9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814578 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.045e-46
Identity = 90/96 (93.75%), Postives = 95/96 (98.96%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MIISEKNR+EI KYLFQEGVCYAKKD+NLAKHPEIDVPNLQVIKLMQSFKS+EYVRETFAWM+YYW+LTNDGIEFLRTYLNLPSEIVPATLKKQAK
Sbjct:    1 MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Match: B9RCG9_RICCO (40S ribosomal protein S10, putative OS=Ricinus communis GN=RCOM_1688110 PE=4 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.365e-46
Identity = 90/96 (93.75%), Postives = 93/96 (96.88%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MII EKNR+EI KYLFQEGVCYAKKDFNLAKHP IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQ+K
Sbjct:    1 MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQSK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Match: A9PJV7_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.783e-46
Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MII EKNR+EI KYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKS+EYVRETFAWM+YYW+LTNDGIEFLRTYLNLPSEIVPATLKKQAK
Sbjct:    1 MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Match: A9PC38_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.783e-46
Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MII EKNR+EI KYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKS+EYVRETFAWM+YYW+LTNDGIEFLRTYLNLPSEIVPATLKKQAK
Sbjct:    1 MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Match: Q2XTB2_SOLTU (40S ribosomal protein S10-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 5.189e-46
Identity = 97/151 (64.24%), Postives = 102/151 (67.55%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKGGAPADY 521
            MIISEKNR+EI KYLFQEGVCYAKKD+NLAKHP IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYW+LTNDGIEFLRTYLNLPSEIVPATLKK AK                                              +KGGAPADY
Sbjct:    1 MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDRPRYGDRDGYRAGPRGPPGEFGGEKGGAPADY 151

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Match: Q2XPV4_SOLTU (40S ribosomal protein S10-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.776e-46
Identity = 96/151 (63.58%), Postives = 102/151 (67.55%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKGGAPADY 521
            MIISEKNR+EI KYLFQEGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYW+LTNDGIEFLRTYLNLPSEIVPATLKK AK                                              +KGGAPADY
Sbjct:    1 MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDRPRFGDRDGYRAGPRGPPGEFGGEKGGAPADY 151

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Match: B9H3L7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_198910 PE=4 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.776e-46
Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 3

Query:   72 IISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            II EKNR+EI KYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKS+EYVRETFAWM+YYW+LTNDGIEFLRTYLNLPSEIVPATLKKQAK
Sbjct:    2 IIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TAIR peptide
Match: AT5G52650.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:21355781-21357003 REVERSE LENGTH=179)

HSP 1 Score: 187.193 bits (474), Expect = 9.576e-48
Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MIISE NRKEICKYLF+EGVC+AKKDFNLAKHP IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYWFLTN+GIEFLRTYLNLPS++VPATLKK AK
Sbjct:    1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TAIR peptide
Match: AT4G25740.2 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr4:13107488-13108751 REVERSE LENGTH=149)

HSP 1 Score: 184.496 bits (467), Expect = 6.207e-47
Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MIISE NR+EICKYLF+EGVC+AKKDFNL KHP IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYWFLTN+GIEFLRTYLNLPS++VPATLKK AK
Sbjct:    1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TAIR peptide
Match: AT4G25740.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr4:13107488-13108751 REVERSE LENGTH=177)

HSP 1 Score: 184.496 bits (467), Expect = 6.207e-47
Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MIISE NR+EICKYLF+EGVC+AKKDFNL KHP IDVPNLQVIKLMQSFKS+EYVRETFAWMHYYWFLTN+GIEFLRTYLNLPS++VPATLKK AK
Sbjct:    1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TAIR peptide
Match: AT5G41520.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:16609377-16610583 REVERSE LENGTH=180)

HSP 1 Score: 169.088 bits (427), Expect = 2.699e-42
Identity = 82/97 (84.54%), Postives = 90/97 (92.78%), Query Frame = 3

Query:   69 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEID-VPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MIISE NR+EI KYLF+EGV +AKKDFNL +HP I+ VPNLQVIKLMQSFKS+EYVRETFAWMHYYWFLTN+GI+FLRTYLNLPSEIVPATLKKQ K
Sbjct:    1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQK 97

[Close]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TAIR peptide
Match: AT5G41520.2 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:16609377-16610203 REVERSE LENGTH=134)

HSP 1 Score: 104.76 bits (260), Expect = 6.251e-23
Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 3

Query:  204 MQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 356
            MQSFKS+EYVRETFAWMHYYWFLTN+GI+FLRTYLNLPSEIVPATLKKQ K
Sbjct:    1 MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQK 51

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig1601 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig1601 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS103_ARATH	9.796e-47	90.63	40S ribosomal protein S10-3 OS=Arabidopsis thalian...	[more]
RS101_ARATH	6.350e-46	88.54	40S ribosomal protein S10-1 OS=Arabidopsis thalian...	[more]
RS10_ORYSJ	5.031e-43	84.38	40S ribosomal protein S10 OS=Oryza sativa subsp. j...	[more]
RS102_ARATH	2.761e-41	84.54	40S ribosomal protein S10-2 OS=Arabidopsis thalian...	[more]
RS10_LUMRU	2.863e-30	63.54	40S ribosomal protein S10 OS=Lumbricus rubellus GN...	[more]
RS10_SPOFR	4.135e-29	59.79	40S ribosomal protein S10 OS=Spodoptera frugiperda...	[more]
RS10_ICTPU	2.269e-27	58.59	40S ribosomal protein S10 OS=Ictalurus punctatus G...	[more]
RS10_RAT	3.870e-27	59.38	40S ribosomal protein S10 OS=Rattus norvegicus GN=...	[more]
RS10_MOUSE	3.870e-27	59.38	40S ribosomal protein S10 OS=Mus musculus GN=Rps10...	[more]
RS10_HUMAN	3.870e-27	59.38	40S ribosomal protein S10 OS=Homo sapiens GN=RPS10...	[more]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FGT6_MEDTR	3.839e-49	98.96	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6T1S1_SOYBN	2.488e-48	96.88	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SY19_SOYBN	3.250e-48	96.88	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PHC9_POPTR	1.045e-46	93.75	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RCG9_RICCO	1.365e-46	93.75	40S ribosomal protein S10, putative OS=Ricinus com...	[more]
A9PJV7_9ROSI	1.783e-46	93.75	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PC38_POPTR	1.783e-46	93.75	Putative uncharacterized protein OS=Populus tricho...	[more]
Q2XTB2_SOLTU	5.189e-46	64.24	40S ribosomal protein S10-like OS=Solanum tuberosu...	[more]
Q2XPV4_SOLTU	6.776e-46	63.58	40S ribosomal protein S10-like protein OS=Solanum ...	[more]
B9H3L7_POPTR	6.776e-46	93.68	Predicted protein (Fragment) OS=Populus trichocarp...	[more]

BLAST of Cicer_arietinum_v1_Contig1601 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G52650.1	9.576e-48	90.63	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT4G25740.2	6.207e-47	88.54	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT4G25740.1	6.207e-47	88.54	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT5G41520.1	2.699e-42	84.54	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT5G41520.2	6.251e-23	92.16	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 49..58 score: NAcoord: 64..82 score
None	No IPR available	SEG	seg	seg	coord: 5..22 score
None	No IPR available	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 24..201 score: 2.3
None	No IPR available	SEG	seg	seg	coord: 119..164 score: NAcoord: 174..194 score
None	No IPR available	SEG	seg	seg	coord: 32..47 score
None	No IPR available	SEG	seg	seg	coord: 1..55 score
None	No IPR available	SEG	seg	seg	coord: 2..13 score
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 25..118 score: 2.7

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig1601 ID=Cicer_arietinum_v1_Contig1601; Name=Cicer_arietinum_v1_Contig1601; organism=Cicer arietinum; type=contig; length=829bp
GAGGGTTTATAATTCCATCAACGATAAACTGCGGCAGCTTCCTTTCGTCT
CCTCCACTCGTCGTCGCCATGATTATCTCAGAGAAGAACCGCAAAGAGAT
CTGCAAATACCTGTTTCAAGAAGGTGTATGTTACGCTAAGAAGGATTTCA
ATTTGGCTAAGCATCCCGAAATCGATGTTCCTAATTTGCAGGTGATTAAG
CTTATGCAGAGTTTCAAATCGAGGGAATATGTTAGAGAAACCTTCGCTTG
GATGCACTATTACTGGTTCCTCACAAACGATGGAATCGAGTTTCTTAGGA
CTTATCTTAATCTACCATCGGAAATTGTTCCTGCTACTTTGAAGAAACAG
GCTAAGCCACCTGGTAGACCATTTGGTGGCCCACCCGGCGATCGCCCTAG
GGGTCCACCACGTTTTGAAGGTGAACGTAGATTTGGAGGCGACAGAGATG
GGTATCGTGGAGGACCACGAGGACCTGCCGGTGAGTTTGGAGGAGACAAA
GGAGGAGCTCCTGCTGATTACAGACCCTCATTTGGAGGTCCTGGTGGAAG
GCCTGGATTCGGTCGTGGATCTGGTGGTTTTGGGGCTCCAACCAGCTCAG
ATGCTTAAATTATAATGTTTTCTGCTTAGTTTTTTTTGAACAAGATTTTG
TTGTAGTTGGAGTCAATGATAGATTTCCCTGCCAGAAGTTGTTTAATCGA
CATGTTGCATTACTTTATATTGGTTATCATTCAATGAAGATTTTGACCAC
AAAAAATCTAATAATAAAACATAAAGGTTCTCGGCGTTGATACCCCTGCT
TAACCCTAATGAATTCGCGGCCGCCTGGG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR005326	Plectin_eS10_N

Search form

Cicer_arietinum_v1_Contig1601