Cicer_arietinum_v1_Contig1689

Contig Overview
NameCicer_arietinum_v1_Contig1689
Unique NameCicer_arietinum_v1_Contig1689
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length760
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR406221ESTGR406221:83..472 +Cicer arietinum unigene v1n/a
GR398238ESTGR398238:215..621 +Cicer arietinum unigene v1n/a
GR407338ESTGR407338:1..687 +Cicer arietinum unigene v1n/a
GR396533ESTGR396533:10..760 -Cicer arietinum unigene v1n/a
GR397564ESTGR397564:25..760 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR406221GR406221Cicer arietinumEST
GR398238GR398238Cicer arietinumEST
GR407338GR407338Cicer arietinumEST
GR396533GR396533Cicer arietinumEST
GR397564GR397564Cicer arietinumEST


Homology
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BLAST of Cicer_arietinum_v1_Contig1689 vs. TrEMBL
Match: C6SW29_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.079e-11
Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = -1 
Query:  326 MASVQCYKICEXXXXXXXXXXQHGSLGQKVTDLFKGHPNEGTQTQYCSKKTEVISQSGN----LVSKSETK-KCNQTFNNSGASSTTV---KCQGRNRRQHKRNNLFQKIKDGISGHXXXXXXXXXXXDNEHCHNRKN 715
            MASVQC+K C+           H S GQKV+DLFKGH +    + Y + +T+V+SQSG+      +K++T+  C QT  ++   S T      QGR +R+HKR  + Q IKD +SG            DNE CH RK+
Sbjct:    1 MASVQCHKTCKVSCQQENQ---HASFGQKVSDLFKGHQHNDHSSNYAT-QTKVLSQSGSGLGPFTTKTQTQCGCPQTHLSTTHGSNTKGHGHGQGRIKREHKR-GMLQNIKDRLSG----DTSSDSESDNETCHKRKD 129
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1689 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
C6SW29_SOYBN2.079e-1139.13Putative uncharacterized protein OS=Glycine max PE... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 15..26
score
NoneNo IPR availableSEGsegsegcoord: 12..21
score
NoneNo IPR availableSEGsegsegcoord: 9..20
score: NAcoord: 25..39
score
NoneNo IPR availableSEGsegsegcoord: 27..37
score: NAcoord: 125..136
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1689 ID=Cicer_arietinum_v1_Contig1689; Name=Cicer_arietinum_v1_Contig1689; organism=Cicer arietinum; type=contig; length=760bp
AATTTTAACCACACACCAAACAGTTTTATTCATATATATATATATAATAT
GTAGGAGTATCGATCTTACTTCGATCACAGTACATGCATTTGTTATTGGT
AAACTTGCACCATAACCAAACTACATTGGCTTAATTTCATACATCAAATT
ACATTCATTTTTTATTTTTAAGATACTTTTGATTGGTTTTTTTGTTACAA
TTTTATACTTTAATGTAGCTACTTATTCATACTGGCCAACAATCACACAA
TATATTGGACTCCCAGTTGCATATACTGATCCTCAAACTCCAACTTATTA
TTAGTACAGCTTCTCCTCAAATTCAGTTCTTCCTGTTGTGACAATGTTCA
TTGTCACTGTCACTCTCATCACTGCTACTGTCACTGCTGTGACCTGATAT
GCCATCCTTGATCTTCTGGAACAAGTTGTTTCTCTTGTGCTGCCTCCTAT
TTCTCCCCTGGCATTTCACGGTGGTACTAGAAGCACCACTGTTGTTGAAT
GTTTGGTTGCATTTTTTAGTTTCACTTTTGGAAACTAAATTTCCTGACTG
AGAAATCACCTCAGTTTTCTTGCTACAGTATTGGGTTTGTGTTCCCTCAT
TGGGGTGCCCTTTGAACAAGTCAGTTACCTTCTGTCCTAAGGAACCATGT
TGCTGCTGGGTTTTGTGTTGTTGGCAGCTTTGTTCACAGATTTTATAGCA
CTGAACAGAGGCCATTGCAAAAAGGTTGTTTCTTGTGGTTTGCTTGTTGC
TTATGCTTTC
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